RNA–Protein interactions for RNA: ENST00000415051.5

UBE2D4-202, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-202ENST00000415051 ZRANB1Q9UGI0 708 aa26.35■■□□□ 1.81
UBE2D4-202ENST00000415051 PXDNQ92626 1479 aa26.35■■□□□ 1.81
UBE2D4-202ENST00000415051 HFM1A2PYH4 1435 aa26.31■■□□□ 1.8
UBE2D4-202ENST00000415051 CDC42BPGQ6DT37 1551 aa26.3■■□□□ 1.8
UBE2D4-202ENST00000415051 VGFO15240 615 aaPredicted RBP26.29■■□□□ 1.8
UBE2D4-202ENST00000415051 PPLO60437 1756 aa26.28■■□□□ 1.8
UBE2D4-202ENST00000415051 CCDC125Q86Z20 511 aa26.28■■□□□ 1.8
UBE2D4-202ENST00000415051 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.28■■□□□ 1.8
UBE2D4-202ENST00000415051 NPHP3Q7Z494 1330 aa26.26■■□□□ 1.79
UBE2D4-202ENST00000415051 GJD4Q96KN9 370 aaPredicted RBP26.26■■□□□ 1.79
UBE2D4-202ENST00000415051 GLI3P10071 1580 aa26.25■■□□□ 1.79
UBE2D4-202ENST00000415051 XPCQ01831 940 aaPredicted RBP26.25■■□□□ 1.79
UBE2D4-202ENST00000415051 ESCO1Q5FWF5 840 aa26.25■■□□□ 1.79
UBE2D4-202ENST00000415051 FOXD1Q16676 465 aa26.24■■□□□ 1.79
UBE2D4-202ENST00000415051 NAIPQ13075 1403 aa26.22■■□□□ 1.79
UBE2D4-202ENST00000415051 FOXO3O43524 673 aa26.22■■□□□ 1.79
UBE2D4-202ENST00000415051 RPGRIP1LQ68CZ1 1315 aa26.21■■□□□ 1.79
UBE2D4-202ENST00000415051 SLIT2O94813 1529 aa26.21■■□□□ 1.79
UBE2D4-202ENST00000415051 RALGAPBQ86X10 1494 aa26.21■■□□□ 1.79
UBE2D4-202ENST00000415051 BRWD3Q6RI45 1802 aa26.21■■□□□ 1.79
UBE2D4-202ENST00000415051 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
UBE2D4-202ENST00000415051 BLMP54132 1417 aaPredicted RBP26.18■■□□□ 1.78
UBE2D4-202ENST00000415051 UNC5CLQ8IV45 518 aa26.16■■□□□ 1.78
UBE2D4-202ENST00000415051 TECPR2O15040 1411 aa26.14■■□□□ 1.78
UBE2D4-202ENST00000415051 NUTM2FA1L443 756 aa26.14■■□□□ 1.78
UBE2D4-202ENST00000415051 USP32Q8NFA0 1604 aa26.14■■□□□ 1.77
UBE2D4-202ENST00000415051 LRPPRCP42704 1394 aaKnown RBP26.13■■□□□ 1.77
UBE2D4-202ENST00000415051 WAPLQ7Z5K2 1190 aa26.13■■□□□ 1.77
UBE2D4-202ENST00000415051 DEFB132Q7Z7B7 95 aa26.13■■□□□ 1.77
UBE2D4-202ENST00000415051 FMN2Q9NZ56 1722 aa26.13■■□□□ 1.77
UBE2D4-202ENST00000415051 SPATA31A3Q5VYP0 1347 aa26.13■■□□□ 1.77
UBE2D4-202ENST00000415051 PLEKHH1Q9ULM0 1364 aa26.12■■□□□ 1.77
UBE2D4-202ENST00000415051 ADGRF5Q8IZF2 1346 aa26.12■■□□□ 1.77
UBE2D4-202ENST00000415051 KNDC1Q76NI1 1749 aa26.1■■□□□ 1.77
UBE2D4-202ENST00000415051 RRBP1Q9P2E9 1410 aaKnown RBP26.09■■□□□ 1.77
UBE2D4-202ENST00000415051 LRP5O75197 1615 aa26.09■■□□□ 1.77
UBE2D4-202ENST00000415051 KIF1AQ12756 1690 aa26.09■■□□□ 1.77
UBE2D4-202ENST00000415051 STK26Q9P289 416 aa26.07■■□□□ 1.76
UBE2D4-202ENST00000415051 IFT172Q9UG01 1749 aa26.07■■□□□ 1.76
UBE2D4-202ENST00000415051 SEPT12Q8IYM1 358 aa26.06■■□□□ 1.76
UBE2D4-202ENST00000415051 ABCC11Q96J66 1382 aa26.06■■□□□ 1.76
UBE2D4-202ENST00000415051 PLCH1Q4KWH8 1693 aa26.06■■□□□ 1.76
UBE2D4-202ENST00000415051 CCDC144AA2RUR9 1427 aa26.05■■□□□ 1.76
UBE2D4-202ENST00000415051 RGPD8O14715 1765 aaPredicted RBP26.05■■□□□ 1.76
UBE2D4-202ENST00000415051 SLC4A1APQ9BWU0 796 aaKnown RBP26.04■■□□□ 1.76
UBE2D4-202ENST00000415051 ABCA3Q99758 1704 aa26.03■■□□□ 1.76
UBE2D4-202ENST00000415051 NWD2Q9ULI1 1742 aa26.03■■□□□ 1.76
UBE2D4-202ENST00000415051 VPS72Q15906 364 aa26.03■■□□□ 1.76
UBE2D4-202ENST00000415051 TMEM132EQ6IEE7 984 aa26.03■■□□□ 1.76
UBE2D4-202ENST00000415051 SPATA31E1Q6ZUB1 1445 aa26.03■■□□□ 1.76
UBE2D4-202ENST00000415051 ONECUT3O60422 494 aaPredicted RBP26.02■■□□□ 1.76
UBE2D4-202ENST00000415051 KRT28Q7Z3Y7 464 aa26.02■■□□□ 1.76
UBE2D4-202ENST00000415051 TNS3Q68CZ2 1445 aa26■■□□□ 1.75
UBE2D4-202ENST00000415051 CABLES1Q8TDN4 633 aa26■■□□□ 1.75
UBE2D4-202ENST00000415051 PIK3C2GO75747 1445 aa25.99■■□□□ 1.75
UBE2D4-202ENST00000415051 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
UBE2D4-202ENST00000415051 SF3B2Q13435 895 aaKnown RBP25.96■■□□□ 1.75
UBE2D4-202ENST00000415051 RGL3Q3MIN7 710 aa25.96■■□□□ 1.75
UBE2D4-202ENST00000415051 KRT27Q7Z3Y8 459 aa25.96■■□□□ 1.75
UBE2D4-202ENST00000415051 ANKRD30BQ9BXX2 1392 aa25.95■■□□□ 1.75
UBE2D4-202ENST00000415051 NRAPQ86VF7 1730 aa25.94■■□□□ 1.74
UBE2D4-202ENST00000415051 PHF8Q9UPP1 1060 aa25.94■■□□□ 1.74
UBE2D4-202ENST00000415051 NRXN1Q9ULB1 1477 aa25.93■■□□□ 1.74
UBE2D4-202ENST00000415051 SBNO1A3KN83 1393 aa25.93■■□□□ 1.74
UBE2D4-202ENST00000415051 PSDA5PKW4 1024 aaPredicted RBP25.92■■□□□ 1.74
UBE2D4-202ENST00000415051 FAM83GA6ND36 823 aa25.91■■□□□ 1.74
UBE2D4-202ENST00000415051 PLEKHG5O94827 1062 aa25.91■■□□□ 1.74
UBE2D4-202ENST00000415051 SIRT1Q96EB6 747 aa25.91■■□□□ 1.74
UBE2D4-202ENST00000415051 HRCP23327 699 aa25.9■■□□□ 1.74
UBE2D4-202ENST00000415051 HAP1P54257 671 aaPredicted RBP25.9■■□□□ 1.74
UBE2D4-202ENST00000415051 CCDC9Q9Y3X0 531 aaKnown RBP25.9■■□□□ 1.74
UBE2D4-202ENST00000415051 PSME1Q06323 249 aa25.89■■□□□ 1.74
UBE2D4-202ENST00000415051 ARHGEF10O15013 1369 aa25.87■■□□□ 1.73
UBE2D4-202ENST00000415051 TRPM3Q9HCF6 1732 aaPredicted RBP25.86■■□□□ 1.73
UBE2D4-202ENST00000415051 BAG6P46379 1132 aa25.85■■□□□ 1.73
UBE2D4-202ENST00000415051 FAM98CQ17RN3 349 aaKnown RBP25.85■■□□□ 1.73
UBE2D4-202ENST00000415051 RGPD1P0DJD0 1748 aa25.84■■□□□ 1.73
UBE2D4-202ENST00000415051 C14orf93Q9H972 538 aaKnown RBP25.84■■□□□ 1.73
UBE2D4-202ENST00000415051 LMOD2Q6P5Q4 547 aa25.83■■□□□ 1.73
UBE2D4-202ENST00000415051 ALS2Q96Q42 1657 aa25.82■■□□□ 1.72
UBE2D4-202ENST00000415051 TNS1Q9HBL0 1735 aaKnown RBP25.81■■□□□ 1.72
UBE2D4-202ENST00000415051 EN1Q05925 392 aaPredicted RBP25.81■■□□□ 1.72
UBE2D4-202ENST00000415051 COL14A1Q05707 1796 aaKnown RBP25.8■■□□□ 1.72
UBE2D4-202ENST00000415051 PMFBP1Q8TBY8 1022 aa25.8■■□□□ 1.72
UBE2D4-202ENST00000415051 BTG4Q9NY30 223 aa25.8■■□□□ 1.72
UBE2D4-202ENST00000415051 A0A0G2JS52 829 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 MYT1Q01538 1121 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 SAFB2Q14151 953 aaKnown RBP eCLIP25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 CFAP70Q5T0N1 1121 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 FAM182BQ5T319 152 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 PRAM1Q96QH2 718 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 MPHOSPH9Q99550 1183 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 THSD7AQ9UPZ6 1657 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 CRYBG1Q9Y4K1 1723 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 ANKARQ7Z5J8 1434 aa25.79■■□□□ 1.72
UBE2D4-202ENST00000415051 ADGRB2O60241 1585 aa25.78■■□□□ 1.72
UBE2D4-202ENST00000415051 DISP2A7MBM2 1401 aa25.78■■□□□ 1.72
UBE2D4-202ENST00000415051 DHX57Q6P158 1386 aaKnown RBP25.77■■□□□ 1.72
UBE2D4-202ENST00000415051 DLC1Q96QB1 1528 aa25.76■■□□□ 1.71
UBE2D4-202ENST00000415051 SPATA31A5Q5VU36 1347 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms