RNA–Protein interactions for RNA: ENST00000413388.2

SLC9A3R1-202, Transcript of SLC9A3 regulator 1, humanhuman

TSL 2 BASIC

Gene SLC9A3R1, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-202ENST00000413388 ABCC11Q96J66 1382 aa25.75■■□□□ 1.71
SLC9A3R1-202ENST00000413388 TECPR2O15040 1411 aa25.73■■□□□ 1.71
SLC9A3R1-202ENST00000413388 PNPLA6Q8IY17 1366 aa25.73■■□□□ 1.71
SLC9A3R1-202ENST00000413388 NUTM2FA1L443 756 aa25.73■■□□□ 1.71
SLC9A3R1-202ENST00000413388 C14orf93Q9H972 538 aaKnown RBP25.73■■□□□ 1.71
SLC9A3R1-202ENST00000413388 YTHDC2Q9H6S0 1430 aaKnown RBP25.72■■□□□ 1.71
SLC9A3R1-202ENST00000413388 DHX57Q6P158 1386 aaKnown RBP25.72■■□□□ 1.71
SLC9A3R1-202ENST00000413388 C8orf37Q96NL8 207 aa25.72■■□□□ 1.71
SLC9A3R1-202ENST00000413388 SOS2Q07890 1332 aaPredicted RBP25.71■■□□□ 1.71
SLC9A3R1-202ENST00000413388 CDC42BPGQ6DT37 1551 aa25.71■■□□□ 1.71
SLC9A3R1-202ENST00000413388 CFAP70Q5T0N1 1121 aa25.71■■□□□ 1.71
SLC9A3R1-202ENST00000413388 NPHP3Q7Z494 1330 aa25.7■■□□□ 1.71
SLC9A3R1-202ENST00000413388 AFF2P51816 1311 aa25.69■■□□□ 1.7
SLC9A3R1-202ENST00000413388 HRCP23327 699 aa25.69■■□□□ 1.7
SLC9A3R1-202ENST00000413388 RXRBP28702 533 aa25.69■■□□□ 1.7
SLC9A3R1-202ENST00000413388 MYOM2P54296 1465 aa25.68■■□□□ 1.7
SLC9A3R1-202ENST00000413388 ADAMTS2O95450 1211 aa25.68■■□□□ 1.7
SLC9A3R1-202ENST00000413388 PLEKHH1Q9ULM0 1364 aa25.68■■□□□ 1.7
SLC9A3R1-202ENST00000413388 KNDC1Q76NI1 1749 aa25.66■■□□□ 1.7
SLC9A3R1-202ENST00000413388 FOXO3O43524 673 aa25.66■■□□□ 1.7
SLC9A3R1-202ENST00000413388 SIRT1Q96EB6 747 aa25.66■■□□□ 1.7
SLC9A3R1-202ENST00000413388 NGLY1Q96IV0 654 aa25.66■■□□□ 1.7
SLC9A3R1-202ENST00000413388 KDM2AQ9Y2K7 1162 aa25.66■■□□□ 1.7
SLC9A3R1-202ENST00000413388 LAMC1P11047 1609 aa25.64■■□□□ 1.7
SLC9A3R1-202ENST00000413388 DCAF11Q8TEB1 546 aa25.64■■□□□ 1.7
SLC9A3R1-202ENST00000413388 POGKQ9P215 609 aa25.64■■□□□ 1.7
SLC9A3R1-202ENST00000413388 NRXN1Q9ULB1 1477 aa25.64■■□□□ 1.69
SLC9A3R1-202ENST00000413388 SAFB2Q14151 953 aaKnown RBP eCLIP25.63■■□□□ 1.69
SLC9A3R1-202ENST00000413388 XPCQ01831 940 aaPredicted RBP25.62■■□□□ 1.69
SLC9A3R1-202ENST00000413388 PRAM1Q96QH2 718 aa25.62■■□□□ 1.69
SLC9A3R1-202ENST00000413388 QTRT2Q9H974 415 aaKnown RBP25.61■■□□□ 1.69
SLC9A3R1-202ENST00000413388 STAC3Q96MF2 364 aa25.59■■□□□ 1.69
SLC9A3R1-202ENST00000413388 TRAK1Q9UPV9 953 aa25.56■■□□□ 1.68
SLC9A3R1-202ENST00000413388 RBM6P78332 1123 aaKnown RBP25.55■■□□□ 1.68
SLC9A3R1-202ENST00000413388 FMN2Q9NZ56 1722 aa25.54■■□□□ 1.68
SLC9A3R1-202ENST00000413388 PXDNQ92626 1479 aa25.54■■□□□ 1.68
SLC9A3R1-202ENST00000413388 USP21Q9UK80 565 aa25.54■■□□□ 1.68
SLC9A3R1-202ENST00000413388 KRT28Q7Z3Y7 464 aa25.53■■□□□ 1.68
SLC9A3R1-202ENST00000413388 PHF8Q9UPP1 1060 aa25.53■■□□□ 1.68
SLC9A3R1-202ENST00000413388 PSME1Q06323 249 aa25.52■■□□□ 1.68
SLC9A3R1-202ENST00000413388 CDK12Q9NYV4 1490 aaPredicted RBP25.51■■□□□ 1.67
SLC9A3R1-202ENST00000413388 DLC1Q96QB1 1528 aa25.51■■□□□ 1.67
SLC9A3R1-202ENST00000413388 KIF1AQ12756 1690 aa25.51■■□□□ 1.67
SLC9A3R1-202ENST00000413388 TRPC5Q9UL62 973 aaPredicted RBP25.5■■□□□ 1.67
SLC9A3R1-202ENST00000413388 COL22A1Q8NFW1 1626 aaPredicted RBP25.49■■□□□ 1.67
SLC9A3R1-202ENST00000413388 HAP1P54257 671 aaPredicted RBP25.49■■□□□ 1.67
SLC9A3R1-202ENST00000413388 HIRIP3Q9BW71 556 aaPredicted RBP25.48■■□□□ 1.67
SLC9A3R1-202ENST00000413388 SPATA31A3Q5VYP0 1347 aa25.47■■□□□ 1.67
SLC9A3R1-202ENST00000413388 MINK1Q8N4C8 1332 aaPredicted RBP25.47■■□□□ 1.67
SLC9A3R1-202ENST00000413388 LMOD2Q6P5Q4 547 aa25.47■■□□□ 1.67
SLC9A3R1-202ENST00000413388 FNBP4Q8N3X1 1017 aaPredicted RBP25.47■■□□□ 1.67
SLC9A3R1-202ENST00000413388 UPF1Q92900 1129 aaKnown RBP eCLIP25.46■■□□□ 1.677e-7■■□□□ 11.8
SLC9A3R1-202ENST00000413388 ADGRB1O14514 1584 aa25.46■■□□□ 1.67
SLC9A3R1-202ENST00000413388 PMFBP1Q8TBY8 1022 aa25.45■■□□□ 1.66
SLC9A3R1-202ENST00000413388 PLEKHG5O94827 1062 aa25.44■■□□□ 1.66
SLC9A3R1-202ENST00000413388 EIF3AQ14152 1382 aaKnown RBP25.44■■□□□ 1.66
SLC9A3R1-202ENST00000413388 ANKARQ7Z5J8 1434 aa25.42■■□□□ 1.66
SLC9A3R1-202ENST00000413388 RGPD8O14715 1765 aaPredicted RBP25.41■■□□□ 1.66
SLC9A3R1-202ENST00000413388 RGS12O14924 1447 aa25.41■■□□□ 1.66
SLC9A3R1-202ENST00000413388 TNS3Q68CZ2 1445 aa25.4■■□□□ 1.66
SLC9A3R1-202ENST00000413388 WASLO00401 505 aaPredicted RBP25.39■■□□□ 1.66
SLC9A3R1-202ENST00000413388 SBNO1A3KN83 1393 aa25.38■■□□□ 1.65
SLC9A3R1-202ENST00000413388 ADGRB2O60241 1585 aa25.38■■□□□ 1.65
SLC9A3R1-202ENST00000413388 ARHGEF10O15013 1369 aa25.37■■□□□ 1.65
SLC9A3R1-202ENST00000413388 GPRASP1Q5JY77 1395 aa25.37■■□□□ 1.65
SLC9A3R1-202ENST00000413388 ATRNO75882 1429 aa25.36■■□□□ 1.65
SLC9A3R1-202ENST00000413388 NGDNQ8NEJ9 315 aaKnown RBP25.35■■□□□ 1.65
SLC9A3R1-202ENST00000413388 CABLES1Q8TDN4 633 aa25.35■■□□□ 1.65
SLC9A3R1-202ENST00000413388 MARF1Q9Y4F3 1742 aaKnown RBP25.34■■□□□ 1.65
SLC9A3R1-202ENST00000413388 UNC5CLQ8IV45 518 aa25.33■■□□□ 1.65
SLC9A3R1-202ENST00000413388 BCL9LQ86UU0 1499 aa25.33■■□□□ 1.65
SLC9A3R1-202ENST00000413388 TULP4Q9NRJ4 1543 aa25.32■■□□□ 1.64
SLC9A3R1-202ENST00000413388 GJD4Q96KN9 370 aaPredicted RBP25.32■■□□□ 1.64
SLC9A3R1-202ENST00000413388 USP32Q8NFA0 1604 aa25.31■■□□□ 1.64
SLC9A3R1-202ENST00000413388 PRR36Q9H6K5 1346 aa25.31■■□□□ 1.64
SLC9A3R1-202ENST00000413388 ATAD2Q6PL18 1390 aa25.31■■□□□ 1.64
SLC9A3R1-202ENST00000413388 PAK3O75914 559 aaPredicted RBP25.3■■□□□ 1.64
SLC9A3R1-202ENST00000413388 NUDT16Q96DE0 195 aaKnown RBP25.28■■□□□ 1.64
SLC9A3R1-202ENST00000413388 ARHGEF28Q8N1W1 1705 aaKnown RBP25.28■■□□□ 1.64
SLC9A3R1-202ENST00000413388 CDK19Q9BWU1 502 aa25.27■■□□□ 1.64
SLC9A3R1-202ENST00000413388 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
SLC9A3R1-202ENST00000413388 NBPF1Q3BBV0 1214 aa25.26■■□□□ 1.63
SLC9A3R1-202ENST00000413388 SLIT2O94813 1529 aa25.26■■□□□ 1.63
SLC9A3R1-202ENST00000413388 KIAA1210Q9ULL0 1709 aa25.24■■□□□ 1.63
SLC9A3R1-202ENST00000413388 NEUROD1Q13562 356 aa25.23■■□□□ 1.63
SLC9A3R1-202ENST00000413388 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.22■■□□□ 1.63
SLC9A3R1-202ENST00000413388 L3MBTL2Q969R5 705 aa25.21■■□□□ 1.63
SLC9A3R1-202ENST00000413388 RALGAPBQ86X10 1494 aa25.21■■□□□ 1.63
SLC9A3R1-202ENST00000413388 FAM83GA6ND36 823 aa25.2■■□□□ 1.62
SLC9A3R1-202ENST00000413388 VPS72Q15906 364 aa25.2■■□□□ 1.62
SLC9A3R1-202ENST00000413388 SIN3AQ96ST3 1273 aa25.2■■□□□ 1.62
SLC9A3R1-202ENST00000413388 CCDC61Q9Y6R9 512 aa25.2■■□□□ 1.62
SLC9A3R1-202ENST00000413388 ITSN1Q15811 1721 aa25.2■■□□□ 1.62
SLC9A3R1-202ENST00000413388 CENPJQ9HC77 1338 aaPredicted RBP25.19■■□□□ 1.62
SLC9A3R1-202ENST00000413388 SRPK2P78362 688 aaKnown RBP25.19■■□□□ 1.62
SLC9A3R1-202ENST00000413388 ATP7BP35670 1465 aa25.19■■□□□ 1.62
SLC9A3R1-202ENST00000413388 TRPM3Q9HCF6 1732 aaPredicted RBP25.18■■□□□ 1.62
SLC9A3R1-202ENST00000413388 A0A0G2JS52 829 aa25.16■■□□□ 1.62
SLC9A3R1-202ENST00000413388 MYT1Q01538 1121 aa25.16■■□□□ 1.62
SLC9A3R1-202ENST00000413388 ABCA3Q99758 1704 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms