RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 MCM5P33992 734 aa16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 TNNT3P45378 269 aaPredicted RBP16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 STAG3Q9UJ98 1225 aa16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 BLMP54132 1417 aaPredicted RBP16.98■□□□□ 0.31
CLTCL1-201ENST00000412649 GCC1Q96CN9 775 aa16.97■□□□□ 0.31
CLTCL1-201ENST00000412649 MTHFSP49914 203 aa16.97■□□□□ 0.31
CLTCL1-201ENST00000412649 CAMSAP2Q08AD1 1489 aa16.97■□□□□ 0.31
CLTCL1-201ENST00000412649 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
CLTCL1-201ENST00000412649 TRAK1Q9UPV9 953 aa16.97■□□□□ 0.31
CLTCL1-201ENST00000412649 DNMBPQ6XZF7 1577 aa16.97■□□□□ 0.31
CLTCL1-201ENST00000412649 TRIM6-TRIM34B2RNG4 842 aa16.96■□□□□ 0.31
CLTCL1-201ENST00000412649 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
CLTCL1-201ENST00000412649 NOB1Q9ULX3 412 aaKnown RBP16.96■□□□□ 0.31
CLTCL1-201ENST00000412649 RIPK4P57078 832 aa16.96■□□□□ 0.31
CLTCL1-201ENST00000412649 NPM1P06748 294 aaKnown RBP eCLIP16.96■□□□□ 0.31
CLTCL1-201ENST00000412649 BAG4O95429 457 aaKnown RBP16.95■□□□□ 0.3
CLTCL1-201ENST00000412649 KIF14Q15058 1648 aa16.95■□□□□ 0.3
CLTCL1-201ENST00000412649 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
CLTCL1-201ENST00000412649 SYCE3A1L190 88 aa16.95■□□□□ 0.3
CLTCL1-201ENST00000412649 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
CLTCL1-201ENST00000412649 ATP6V1DQ9Y5K8 247 aa16.95■□□□□ 0.3
CLTCL1-201ENST00000412649 KCNJ4P48050 445 aa16.95■□□□□ 0.3
CLTCL1-201ENST00000412649 MPNDQ8N594 471 aa16.94■□□□□ 0.3
CLTCL1-201ENST00000412649 NESP48681 1621 aa16.94■□□□□ 0.3
CLTCL1-201ENST00000412649 SNX21Q969T3 373 aa16.94■□□□□ 0.3
CLTCL1-201ENST00000412649 CBX1P83916 185 aa16.93■□□□□ 0.3
CLTCL1-201ENST00000412649 HS1BP3Q53T59 392 aa16.93■□□□□ 0.3
CLTCL1-201ENST00000412649 RAB3GAP1Q15042 981 aa16.93■□□□□ 0.3
CLTCL1-201ENST00000412649 SMC5Q8IY18 1101 aa16.92■□□□□ 0.3
CLTCL1-201ENST00000412649 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
CLTCL1-201ENST00000412649 ANTXR1Q9H6X2 564 aa16.92■□□□□ 0.3
CLTCL1-201ENST00000412649 TPM3P06753 285 aa16.92■□□□□ 0.3
CLTCL1-201ENST00000412649 TERF1P54274 439 aa16.91■□□□□ 0.3
CLTCL1-201ENST00000412649 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
CLTCL1-201ENST00000412649 GPRASP1Q5JY77 1395 aa16.91■□□□□ 0.3
CLTCL1-201ENST00000412649 ZSCAN23Q3MJ62 389 aa16.91■□□□□ 0.3
CLTCL1-201ENST00000412649 HDGFL2Q7Z4V5 671 aaPredicted RBP16.91■□□□□ 0.3
CLTCL1-201ENST00000412649 SMAP1Q8IYB5 467 aaPredicted RBP16.91■□□□□ 0.3
CLTCL1-201ENST00000412649 ZKSCAN5Q9Y2L8 839 aa16.91■□□□□ 0.3
CLTCL1-201ENST00000412649 PDCL2Q8N4E4 241 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 EFCAB2Q5VUJ9 269 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 CTTNBP2Q8WZ74 1663 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 PZPP20742 1482 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 TMEM57Q8N5G2 664 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 ZNF592Q92610 1267 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 JPH4Q96JJ6 628 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 C1orf115Q9H7X2 142 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 ARHGEF12Q9NZN5 1544 aa16.9■□□□□ 0.3
CLTCL1-201ENST00000412649 KDM5BQ9UGL1 1544 aa16.89■□□□□ 0.3
CLTCL1-201ENST00000412649 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
CLTCL1-201ENST00000412649 CCDC66A2RUB6 948 aa16.89■□□□□ 0.29
CLTCL1-201ENST00000412649 NEK4P51957 841 aa16.89■□□□□ 0.29
CLTCL1-201ENST00000412649 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
CLTCL1-201ENST00000412649 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
CLTCL1-201ENST00000412649 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
CLTCL1-201ENST00000412649 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
CLTCL1-201ENST00000412649 LETM1O95202 739 aaPredicted RBP16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 LMOD3Q0VAK6 560 aa16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 TAF3Q5VWG9 929 aa16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 MCM2P49736 904 aa16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 BMP2KLQ5H9B9 411 aa16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 FAM184AQ8NB25 1140 aa16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 OS9Q13438 667 aaPredicted RBP16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 HDAC1Q13547 482 aaPredicted RBP16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 TESK2Q96S53 571 aa16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
CLTCL1-201ENST00000412649 RLBP1P12271 317 aa16.86■□□□□ 0.29
CLTCL1-201ENST00000412649 HTATSF1O43719 755 aaKnown RBP16.86■□□□□ 0.29
CLTCL1-201ENST00000412649 PRAG1Q86YV5 1406 aa16.86■□□□□ 0.29
CLTCL1-201ENST00000412649 STK26Q9P289 416 aa16.86■□□□□ 0.29
CLTCL1-201ENST00000412649 KIF3BO15066 747 aa16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 DIAPH1O60610 1272 aaKnown RBP16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 CCDC94Q9BW85 323 aaPredicted RBP16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 NOL7Q9UMY1 257 aaKnown RBP16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 IQGAP2Q13576 1575 aa16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 SPAG9O60271 1321 aaKnown RBP16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 KDM6BO15054 1643 aa16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 TRIM27P14373 513 aa16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 SLC4A10Q6U841 1118 aa16.85■□□□□ 0.29
CLTCL1-201ENST00000412649 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
CLTCL1-201ENST00000412649 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
CLTCL1-201ENST00000412649 TNNQ9UQP3 1299 aa16.84■□□□□ 0.29
CLTCL1-201ENST00000412649 PPP4R3BQ5MIZ7 849 aa16.84■□□□□ 0.29
CLTCL1-201ENST00000412649 RBM27Q9P2N5 1060 aaKnown RBP16.84■□□□□ 0.29
CLTCL1-201ENST00000412649 KDM5CP41229 1560 aa16.84■□□□□ 0.29
CLTCL1-201ENST00000412649 TBC1D9Q6ZT07 1266 aa16.83■□□□□ 0.29
CLTCL1-201ENST00000412649 COL17A1Q9UMD9 1497 aaPredicted RBP16.83■□□□□ 0.28
CLTCL1-201ENST00000412649 FGD1P98174 961 aa16.83■□□□□ 0.28
CLTCL1-201ENST00000412649 LRSAM1Q6UWE0 723 aa16.82■□□□□ 0.28
CLTCL1-201ENST00000412649 USP19O94966 1318 aa16.82■□□□□ 0.28
CLTCL1-201ENST00000412649 PRIM1P49642 420 aaKnown RBP16.82■□□□□ 0.28
CLTCL1-201ENST00000412649 GAS2L3Q86XJ1 694 aa16.82■□□□□ 0.28
CLTCL1-201ENST00000412649 PPP1R9BQ96SB3 815 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms