RNA–Protein interactions for RNA: ENST00000412466.1

PMS2P4-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 4, humanhuman

BASIC

Gene PMS2P4, Length 1,052 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P4-201ENST00000412466 RGL3Q3MIN7 710 aa24.18■■□□□ 1.46
PMS2P4-201ENST00000412466 SIN3AQ96ST3 1273 aa24.17■■□□□ 1.46
PMS2P4-201ENST00000412466 NEUROD1Q13562 356 aa24.16■■□□□ 1.46
PMS2P4-201ENST00000412466 ROBO2Q9HCK4 1378 aa24.16■■□□□ 1.46
PMS2P4-201ENST00000412466 C8orf37Q96NL8 207 aa24.14■■□□□ 1.45
PMS2P4-201ENST00000412466 DDX17Q92841 729 aaKnown RBP24.13■■□□□ 1.45
PMS2P4-201ENST00000412466 UPF1Q92900 1129 aaKnown RBP eCLIP24.13■■□□□ 1.45
PMS2P4-201ENST00000412466 CDC42BPGQ6DT37 1551 aa24.12■■□□□ 1.45
PMS2P4-201ENST00000412466 IFT172Q9UG01 1749 aa24.11■■□□□ 1.45
PMS2P4-201ENST00000412466 TIMELESSQ9UNS1 1208 aa24.11■■□□□ 1.45
PMS2P4-201ENST00000412466 RBM6P78332 1123 aaKnown RBP24.08■■□□□ 1.45
PMS2P4-201ENST00000412466 DCAF11Q8TEB1 546 aa24.08■■□□□ 1.45
PMS2P4-201ENST00000412466 RGS12O14924 1447 aa24.08■■□□□ 1.44
PMS2P4-201ENST00000412466 TONSLQ96HA7 1378 aa24.07■■□□□ 1.44
PMS2P4-201ENST00000412466 SOS2Q07890 1332 aaPredicted RBP24.07■■□□□ 1.44
PMS2P4-201ENST00000412466 COL22A1Q8NFW1 1626 aaPredicted RBP24.06■■□□□ 1.44
PMS2P4-201ENST00000412466 NGLY1Q96IV0 654 aa24.06■■□□□ 1.44
PMS2P4-201ENST00000412466 QTRT2Q9H974 415 aaKnown RBP24.06■■□□□ 1.44
PMS2P4-201ENST00000412466 MYOM2P54296 1465 aa24.06■■□□□ 1.44
PMS2P4-201ENST00000412466 ADAMTS2O95450 1211 aa24.05■■□□□ 1.44
PMS2P4-201ENST00000412466 ORAI2Q96SN7 254 aa24.05■■□□□ 1.44
PMS2P4-201ENST00000412466 L3MBTL2Q969R5 705 aa24.04■■□□□ 1.44
PMS2P4-201ENST00000412466 KNDC1Q76NI1 1749 aa24.03■■□□□ 1.44
PMS2P4-201ENST00000412466 NPHP3Q7Z494 1330 aa24.03■■□□□ 1.44
PMS2P4-201ENST00000412466 TECPR2O15040 1411 aa24.01■■□□□ 1.43
PMS2P4-201ENST00000412466 KDM2AQ9Y2K7 1162 aa24■■□□□ 1.43
PMS2P4-201ENST00000412466 ESCO1Q5FWF5 840 aa23.99■■□□□ 1.43
PMS2P4-201ENST00000412466 NRXN1Q9ULB1 1477 aa23.99■■□□□ 1.43
PMS2P4-201ENST00000412466 USP21Q9UK80 565 aa23.98■■□□□ 1.43
PMS2P4-201ENST00000412466 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
PMS2P4-201ENST00000412466 LRPPRCP42704 1394 aaKnown RBP23.98■■□□□ 1.43
PMS2P4-201ENST00000412466 PXDNQ92626 1479 aa23.97■■□□□ 1.43
PMS2P4-201ENST00000412466 TRPC5Q9UL62 973 aaPredicted RBP23.97■■□□□ 1.43
PMS2P4-201ENST00000412466 MARF1Q9Y4F3 1742 aaKnown RBP23.97■■□□□ 1.43
PMS2P4-201ENST00000412466 KIF1AQ12756 1690 aa23.96■■□□□ 1.43
PMS2P4-201ENST00000412466 PIK3C2GO75747 1445 aa23.96■■□□□ 1.43
PMS2P4-201ENST00000412466 ATAD2Q6PL18 1390 aa23.96■■□□□ 1.43
PMS2P4-201ENST00000412466 FMN2Q9NZ56 1722 aa23.94■■□□□ 1.42
PMS2P4-201ENST00000412466 STK26Q9P289 416 aa23.94■■□□□ 1.42
PMS2P4-201ENST00000412466 ATRNO75882 1429 aa23.93■■□□□ 1.42
PMS2P4-201ENST00000412466 ABCC11Q96J66 1382 aa23.92■■□□□ 1.42
PMS2P4-201ENST00000412466 FNBP4Q8N3X1 1017 aaPredicted RBP23.92■■□□□ 1.42
PMS2P4-201ENST00000412466 C14orf93Q9H972 538 aaKnown RBP23.91■■□□□ 1.42
PMS2P4-201ENST00000412466 YTHDC2Q9H6S0 1430 aaKnown RBP23.9■■□□□ 1.42
PMS2P4-201ENST00000412466 KIAA1210Q9ULL0 1709 aa23.9■■□□□ 1.42
PMS2P4-201ENST00000412466 FOXO3O43524 673 aa23.88■■□□□ 1.41
PMS2P4-201ENST00000412466 WAPLQ7Z5K2 1190 aa23.88■■□□□ 1.41
PMS2P4-201ENST00000412466 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.87■■□□□ 1.41
PMS2P4-201ENST00000412466 NUTM2FA1L443 756 aa23.87■■□□□ 1.41
PMS2P4-201ENST00000412466 XPCQ01831 940 aaPredicted RBP23.86■■□□□ 1.41
PMS2P4-201ENST00000412466 PLEKHH1Q9ULM0 1364 aa23.86■■□□□ 1.41
PMS2P4-201ENST00000412466 TMEM132EQ6IEE7 984 aa23.85■■□□□ 1.41
PMS2P4-201ENST00000412466 CFAP70Q5T0N1 1121 aa23.84■■□□□ 1.41
PMS2P4-201ENST00000412466 BCL9LQ86UU0 1499 aa23.82■■□□□ 1.4
PMS2P4-201ENST00000412466 USP32Q8NFA0 1604 aa23.82■■□□□ 1.4
PMS2P4-201ENST00000412466 SIRT1Q96EB6 747 aa23.81■■□□□ 1.4
PMS2P4-201ENST00000412466 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
PMS2P4-201ENST00000412466 SPATA31A3Q5VYP0 1347 aa23.8■■□□□ 1.4
PMS2P4-201ENST00000412466 TNS3Q68CZ2 1445 aa23.78■■□□□ 1.4
PMS2P4-201ENST00000412466 NBPF8Q3BBV2 869 aa23.78■■□□□ 1.4
PMS2P4-201ENST00000412466 HAP1P54257 671 aaPredicted RBP23.77■■□□□ 1.4
PMS2P4-201ENST00000412466 GJD4Q96KN9 370 aaPredicted RBP23.77■■□□□ 1.4
PMS2P4-201ENST00000412466 RGPD8O14715 1765 aaPredicted RBP23.77■■□□□ 1.4
PMS2P4-201ENST00000412466 SLIT2O94813 1529 aa23.76■■□□□ 1.39
PMS2P4-201ENST00000412466 PSME1Q06323 249 aa23.76■■□□□ 1.39
PMS2P4-201ENST00000412466 KRT28Q7Z3Y7 464 aa23.76■■□□□ 1.39
PMS2P4-201ENST00000412466 DLC1Q96QB1 1528 aa23.75■■□□□ 1.39
PMS2P4-201ENST00000412466 ADGRB1O14514 1584 aa23.75■■□□□ 1.39
PMS2P4-201ENST00000412466 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
PMS2P4-201ENST00000412466 PHF8Q9UPP1 1060 aa23.75■■□□□ 1.39
PMS2P4-201ENST00000412466 CCDC125Q86Z20 511 aa23.74■■□□□ 1.39
PMS2P4-201ENST00000412466 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
PMS2P4-201ENST00000412466 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
PMS2P4-201ENST00000412466 RALGAPBQ86X10 1494 aa23.74■■□□□ 1.39
PMS2P4-201ENST00000412466 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
PMS2P4-201ENST00000412466 ABCA3Q99758 1704 aa23.73■■□□□ 1.39
PMS2P4-201ENST00000412466 NBPF1Q3BBV0 1214 aa23.73■■□□□ 1.39
PMS2P4-201ENST00000412466 GLI3P10071 1580 aa23.73■■□□□ 1.39
PMS2P4-201ENST00000412466 PLCH1Q4KWH8 1693 aa23.73■■□□□ 1.39
PMS2P4-201ENST00000412466 NWD2Q9ULI1 1742 aa23.73■■□□□ 1.39
PMS2P4-201ENST00000412466 ARHGEF10O15013 1369 aa23.72■■□□□ 1.39
PMS2P4-201ENST00000412466 ANKARQ7Z5J8 1434 aa23.72■■□□□ 1.39
PMS2P4-201ENST00000412466 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
PMS2P4-201ENST00000412466 GPRASP1Q5JY77 1395 aa23.71■■□□□ 1.39
PMS2P4-201ENST00000412466 PRAM1Q96QH2 718 aa23.71■■□□□ 1.39
PMS2P4-201ENST00000412466 POGKQ9P215 609 aa23.71■■□□□ 1.39
PMS2P4-201ENST00000412466 ZRANB1Q9UGI0 708 aa23.7■■□□□ 1.38
PMS2P4-201ENST00000412466 EIF3AQ14152 1382 aaKnown RBP23.69■■□□□ 1.38
PMS2P4-201ENST00000412466 SAFB2Q14151 953 aaKnown RBP eCLIP23.69■■□□□ 1.38
PMS2P4-201ENST00000412466 LMOD2Q6P5Q4 547 aa23.67■■□□□ 1.38
PMS2P4-201ENST00000412466 CARD11Q9BXL7 1154 aa23.67■■□□□ 1.38
PMS2P4-201ENST00000412466 TRAK1Q9UPV9 953 aa23.65■■□□□ 1.38
PMS2P4-201ENST00000412466 BLMP54132 1417 aaPredicted RBP23.65■■□□□ 1.38
PMS2P4-201ENST00000412466 BRWD3Q6RI45 1802 aa23.64■■□□□ 1.38
PMS2P4-201ENST00000412466 VPS72Q15906 364 aa23.63■■□□□ 1.37
PMS2P4-201ENST00000412466 CCDC9Q9Y3X0 531 aaKnown RBP23.63■■□□□ 1.37
PMS2P4-201ENST00000412466 EP400Q96L91 3159 aa23.63■■□□□ 1.37
PMS2P4-201ENST00000412466 PLEKHG5O94827 1062 aa23.62■■□□□ 1.37
PMS2P4-201ENST00000412466 TULP4Q9NRJ4 1543 aa23.62■■□□□ 1.37
PMS2P4-201ENST00000412466 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms