RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 TECPR2O15040 1411 aa24.63■■□□□ 1.53
SCAMP4-203ENST00000411971 AFF2P51816 1311 aa24.62■■□□□ 1.53
SCAMP4-203ENST00000411971 ZNF772Q68DY9 489 aaPredicted RBP24.62■■□□□ 1.53
SCAMP4-203ENST00000411971 ANKRD30BQ9BXX2 1392 aa24.62■■□□□ 1.53
SCAMP4-203ENST00000411971 LRPPRCP42704 1394 aaKnown RBP24.61■■□□□ 1.53
SCAMP4-203ENST00000411971 RAB3GAP2Q9H2M9 1393 aa24.6■■□□□ 1.53
SCAMP4-203ENST00000411971 NRXN1Q9ULB1 1477 aa24.58■■□□□ 1.52
SCAMP4-203ENST00000411971 RGPD8O14715 1765 aaPredicted RBP24.57■■□□□ 1.52
SCAMP4-203ENST00000411971 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
SCAMP4-203ENST00000411971 NUTM2FA1L443 756 aa24.57■■□□□ 1.52
SCAMP4-203ENST00000411971 C8orf37Q96NL8 207 aa24.57■■□□□ 1.52
SCAMP4-203ENST00000411971 FMN2Q9NZ56 1722 aa24.57■■□□□ 1.52
SCAMP4-203ENST00000411971 COL22A1Q8NFW1 1626 aaPredicted RBP24.57■■□□□ 1.52
SCAMP4-203ENST00000411971 YTHDC2Q9H6S0 1430 aaKnown RBP24.56■■□□□ 1.52
SCAMP4-203ENST00000411971 PXDNQ92626 1479 aa24.56■■□□□ 1.52
SCAMP4-203ENST00000411971 ADAMTS2O95450 1211 aa24.54■■□□□ 1.52
SCAMP4-203ENST00000411971 XPCQ01831 940 aaPredicted RBP24.54■■□□□ 1.52
SCAMP4-203ENST00000411971 RXRBP28702 533 aa24.53■■□□□ 1.52
SCAMP4-203ENST00000411971 ESCO1Q5FWF5 840 aa24.53■■□□□ 1.52
SCAMP4-203ENST00000411971 CFAP70Q5T0N1 1121 aa24.53■■□□□ 1.52
SCAMP4-203ENST00000411971 C14orf93Q9H972 538 aaKnown RBP24.52■■□□□ 1.52
SCAMP4-203ENST00000411971 MYOM2P54296 1465 aa24.51■■□□□ 1.51
SCAMP4-203ENST00000411971 UPF1Q92900 1129 aaKnown RBP eCLIP24.51■■□□□ 1.51
SCAMP4-203ENST00000411971 FOXO3O43524 673 aa24.5■■□□□ 1.51
SCAMP4-203ENST00000411971 RGS12O14924 1447 aa24.5■■□□□ 1.51
SCAMP4-203ENST00000411971 CDK12Q9NYV4 1490 aaPredicted RBP24.5■■□□□ 1.51
SCAMP4-203ENST00000411971 MARF1Q9Y4F3 1742 aaKnown RBP24.49■■□□□ 1.51
SCAMP4-203ENST00000411971 QTRT2Q9H974 415 aaKnown RBP24.48■■□□□ 1.51
SCAMP4-203ENST00000411971 NGLY1Q96IV0 654 aa24.46■■□□□ 1.51
SCAMP4-203ENST00000411971 NPHP3Q7Z494 1330 aa24.45■■□□□ 1.5
SCAMP4-203ENST00000411971 ADGRB1O14514 1584 aa24.45■■□□□ 1.5
SCAMP4-203ENST00000411971 USP32Q8NFA0 1604 aa24.43■■□□□ 1.5
SCAMP4-203ENST00000411971 KIF1AQ12756 1690 aa24.43■■□□□ 1.5
SCAMP4-203ENST00000411971 SAFB2Q14151 953 aaKnown RBP eCLIP24.42■■□□□ 1.5
SCAMP4-203ENST00000411971 SIRT1Q96EB6 747 aa24.42■■□□□ 1.5
SCAMP4-203ENST00000411971 RBM6P78332 1123 aaKnown RBP24.41■■□□□ 1.5
SCAMP4-203ENST00000411971 FNBP4Q8N3X1 1017 aaPredicted RBP24.4■■□□□ 1.5
SCAMP4-203ENST00000411971 DHX57Q6P158 1386 aaKnown RBP24.4■■□□□ 1.5
SCAMP4-203ENST00000411971 PRAM1Q96QH2 718 aa24.39■■□□□ 1.49
SCAMP4-203ENST00000411971 USP21Q9UK80 565 aa24.39■■□□□ 1.49
SCAMP4-203ENST00000411971 DLC1Q96QB1 1528 aa24.39■■□□□ 1.49
SCAMP4-203ENST00000411971 ACIN1Q9UKV3 1341 aaKnown RBP24.38■■□□□ 1.49
SCAMP4-203ENST00000411971 BCL9LQ86UU0 1499 aa24.38■■□□□ 1.49
SCAMP4-203ENST00000411971 ATRNO75882 1429 aa24.37■■□□□ 1.49
SCAMP4-203ENST00000411971 SPATA31A3Q5VYP0 1347 aa24.36■■□□□ 1.49
SCAMP4-203ENST00000411971 KDM2AQ9Y2K7 1162 aa24.35■■□□□ 1.49
SCAMP4-203ENST00000411971 ADGRB2O60241 1585 aa24.34■■□□□ 1.49
SCAMP4-203ENST00000411971 KRT28Q7Z3Y7 464 aa24.34■■□□□ 1.49
SCAMP4-203ENST00000411971 ABCA3Q99758 1704 aa24.34■■□□□ 1.49
SCAMP4-203ENST00000411971 DCAF11Q8TEB1 546 aa24.32■■□□□ 1.48
SCAMP4-203ENST00000411971 PHF8Q9UPP1 1060 aa24.32■■□□□ 1.48
SCAMP4-203ENST00000411971 TRAK1Q9UPV9 953 aa24.32■■□□□ 1.48
SCAMP4-203ENST00000411971 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.31■■□□□ 1.48
SCAMP4-203ENST00000411971 TRPC5Q9UL62 973 aaPredicted RBP24.31■■□□□ 1.48
SCAMP4-203ENST00000411971 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
SCAMP4-203ENST00000411971 EP400Q96L91 3159 aa24.3■■□□□ 1.48
SCAMP4-203ENST00000411971 CABLES1Q8TDN4 633 aa24.29■■□□□ 1.48
SCAMP4-203ENST00000411971 ARHGEF28Q8N1W1 1705 aaKnown RBP24.29■■□□□ 1.48
SCAMP4-203ENST00000411971 TRPM3Q9HCF6 1732 aaPredicted RBP24.29■■□□□ 1.48
SCAMP4-203ENST00000411971 PRR36Q9H6K5 1346 aa24.29■■□□□ 1.48
SCAMP4-203ENST00000411971 TNS3Q68CZ2 1445 aa24.28■■□□□ 1.48
SCAMP4-203ENST00000411971 PMFBP1Q8TBY8 1022 aa24.28■■□□□ 1.48
SCAMP4-203ENST00000411971 SLIT2O94813 1529 aa24.28■■□□□ 1.48
SCAMP4-203ENST00000411971 GLI3P10071 1580 aa24.28■■□□□ 1.48
SCAMP4-203ENST00000411971 HRCP23327 699 aa24.27■■□□□ 1.48
SCAMP4-203ENST00000411971 POGKQ9P215 609 aa24.27■■□□□ 1.48
SCAMP4-203ENST00000411971 MINK1Q8N4C8 1332 aaPredicted RBP24.27■■□□□ 1.48
SCAMP4-203ENST00000411971 PLEKHG5O94827 1062 aa24.26■■□□□ 1.47
SCAMP4-203ENST00000411971 PLCH1Q4KWH8 1693 aa24.25■■□□□ 1.47
SCAMP4-203ENST00000411971 ANKARQ7Z5J8 1434 aa24.25■■□□□ 1.47
SCAMP4-203ENST00000411971 BRWD3Q6RI45 1802 aa24.24■■□□□ 1.47
SCAMP4-203ENST00000411971 ALS2Q96Q42 1657 aa24.23■■□□□ 1.47
SCAMP4-203ENST00000411971 SBNO1A3KN83 1393 aa24.22■■□□□ 1.47
SCAMP4-203ENST00000411971 TULP4Q9NRJ4 1543 aa24.21■■□□□ 1.47
SCAMP4-203ENST00000411971 GJD4Q96KN9 370 aaPredicted RBP24.21■■□□□ 1.47
SCAMP4-203ENST00000411971 RALGAPBQ86X10 1494 aa24.2■■□□□ 1.47
SCAMP4-203ENST00000411971 CRYBG1Q9Y4K1 1723 aa24.2■■□□□ 1.46
SCAMP4-203ENST00000411971 UNC5CLQ8IV45 518 aa24.19■■□□□ 1.46
SCAMP4-203ENST00000411971 PSME1Q06323 249 aa24.18■■□□□ 1.46
SCAMP4-203ENST00000411971 ATAD2Q6PL18 1390 aa24.17■■□□□ 1.46
SCAMP4-203ENST00000411971 WASLO00401 505 aaPredicted RBP24.17■■□□□ 1.46
SCAMP4-203ENST00000411971 LMOD2Q6P5Q4 547 aa24.17■■□□□ 1.46
SCAMP4-203ENST00000411971 NWD2Q9ULI1 1742 aa24.17■■□□□ 1.46
SCAMP4-203ENST00000411971 NRAPQ86VF7 1730 aa24.15■■□□□ 1.46
SCAMP4-203ENST00000411971 ATP7BP35670 1465 aa24.14■■□□□ 1.46
SCAMP4-203ENST00000411971 KIAA1210Q9ULL0 1709 aa24.14■■□□□ 1.45
SCAMP4-203ENST00000411971 FAM83GA6ND36 823 aa24.13■■□□□ 1.45
SCAMP4-203ENST00000411971 ARHGEF10O15013 1369 aa24.13■■□□□ 1.45
SCAMP4-203ENST00000411971 NBPF1Q3BBV0 1214 aa24.12■■□□□ 1.45
SCAMP4-203ENST00000411971 STAC3Q96MF2 364 aa24.12■■□□□ 1.45
SCAMP4-203ENST00000411971 ITSN1Q15811 1721 aa24.12■■□□□ 1.45
SCAMP4-203ENST00000411971 TOPAZ1Q8N9V7 1692 aa24.11■■□□□ 1.45
SCAMP4-203ENST00000411971 HAP1P54257 671 aaPredicted RBP24.1■■□□□ 1.45
SCAMP4-203ENST00000411971 VPS72Q15906 364 aa24.08■■□□□ 1.45
SCAMP4-203ENST00000411971 NUDT16Q96DE0 195 aaKnown RBP24.07■■□□□ 1.44
SCAMP4-203ENST00000411971 EIF3AQ14152 1382 aaKnown RBP24.06■■□□□ 1.44
SCAMP4-203ENST00000411971 GPRASP1Q5JY77 1395 aa24.06■■□□□ 1.44
SCAMP4-203ENST00000411971 COL14A1Q05707 1796 aaKnown RBP24.06■■□□□ 1.44
SCAMP4-203ENST00000411971 SRCAPQ6ZRS2 3230 aa24.05■■□□□ 1.44
SCAMP4-203ENST00000411971 CDK19Q9BWU1 502 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms