RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 NPHP3Q7Z494 1330 aa25.02■■□□□ 1.6
MRPL55-220ENST00000411464 STK26Q9P289 416 aa25.01■■□□□ 1.59
MRPL55-220ENST00000411464 FNBP4Q8N3X1 1017 aaPredicted RBP25■■□□□ 1.59
MRPL55-220ENST00000411464 ADGRF5Q8IZF2 1346 aa25■■□□□ 1.59
MRPL55-220ENST00000411464 CCDC144AA2RUR9 1427 aa24.98■■□□□ 1.59
MRPL55-220ENST00000411464 FOXO3O43524 673 aa24.98■■□□□ 1.59
MRPL55-220ENST00000411464 LAMC1P11047 1609 aa24.97■■□□□ 1.59
MRPL55-220ENST00000411464 WAPLQ7Z5K2 1190 aa24.96■■□□□ 1.59
MRPL55-220ENST00000411464 LRPPRCP42704 1394 aaKnown RBP24.95■■□□□ 1.59
MRPL55-220ENST00000411464 XPCQ01831 940 aaPredicted RBP24.95■■□□□ 1.58
MRPL55-220ENST00000411464 MPHOSPH9Q99550 1183 aa24.95■■□□□ 1.58
MRPL55-220ENST00000411464 ATAD2Q6PL18 1390 aa24.94■■□□□ 1.58
MRPL55-220ENST00000411464 ANKRD30BQ9BXX2 1392 aa24.94■■□□□ 1.58
MRPL55-220ENST00000411464 NUTM2FA1L443 756 aa24.94■■□□□ 1.58
MRPL55-220ENST00000411464 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
MRPL55-220ENST00000411464 PPLO60437 1756 aa24.91■■□□□ 1.58
MRPL55-220ENST00000411464 ABCC11Q96J66 1382 aa24.91■■□□□ 1.58
MRPL55-220ENST00000411464 CDC42BPGQ6DT37 1551 aa24.9■■□□□ 1.58
MRPL55-220ENST00000411464 TECPR2O15040 1411 aa24.89■■□□□ 1.58
MRPL55-220ENST00000411464 ATRNO75882 1429 aa24.89■■□□□ 1.58
MRPL55-220ENST00000411464 SPATA31E1Q6ZUB1 1445 aa24.89■■□□□ 1.58
MRPL55-220ENST00000411464 MYOM2P54296 1465 aa24.89■■□□□ 1.57
MRPL55-220ENST00000411464 PXDNQ92626 1479 aa24.88■■□□□ 1.57
MRPL55-220ENST00000411464 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
MRPL55-220ENST00000411464 PLEKHH1Q9ULM0 1364 aa24.85■■□□□ 1.57
MRPL55-220ENST00000411464 GJD4Q96KN9 370 aaPredicted RBP24.85■■□□□ 1.57
MRPL55-220ENST00000411464 BCL9LQ86UU0 1499 aa24.84■■□□□ 1.57
MRPL55-220ENST00000411464 SIRT1Q96EB6 747 aa24.84■■□□□ 1.57
MRPL55-220ENST00000411464 PIK3C2GO75747 1445 aa24.83■■□□□ 1.57
MRPL55-220ENST00000411464 KRT28Q7Z3Y7 464 aa24.82■■□□□ 1.56
MRPL55-220ENST00000411464 CCDC125Q86Z20 511 aa24.82■■□□□ 1.56
MRPL55-220ENST00000411464 YTHDC2Q9H6S0 1430 aaKnown RBP24.82■■□□□ 1.56
MRPL55-220ENST00000411464 SPATA31A3Q5VYP0 1347 aa24.82■■□□□ 1.56
MRPL55-220ENST00000411464 ACIN1Q9UKV3 1341 aaKnown RBP24.82■■□□□ 1.56
MRPL55-220ENST00000411464 C14orf93Q9H972 538 aaKnown RBP24.81■■□□□ 1.56
MRPL55-220ENST00000411464 UNC5CLQ8IV45 518 aa24.8■■□□□ 1.56
MRPL55-220ENST00000411464 ZRANB1Q9UGI0 708 aa24.79■■□□□ 1.56
MRPL55-220ENST00000411464 HAP1P54257 671 aaPredicted RBP24.78■■□□□ 1.56
MRPL55-220ENST00000411464 PSME1Q06323 249 aa24.78■■□□□ 1.56
MRPL55-220ENST00000411464 DHX57Q6P158 1386 aaKnown RBP24.78■■□□□ 1.56
MRPL55-220ENST00000411464 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
MRPL55-220ENST00000411464 CFAP70Q5T0N1 1121 aa24.76■■□□□ 1.55
MRPL55-220ENST00000411464 SRCAPQ6ZRS2 3230 aa24.73■■□□□ 1.55
MRPL55-220ENST00000411464 SAFB2Q14151 953 aaKnown RBP eCLIP24.73■■□□□ 1.55
MRPL55-220ENST00000411464 PRAM1Q96QH2 718 aa24.73■■□□□ 1.55
MRPL55-220ENST00000411464 LMOD2Q6P5Q4 547 aa24.72■■□□□ 1.55
MRPL55-220ENST00000411464 PLEKHG5O94827 1062 aa24.71■■□□□ 1.55
MRPL55-220ENST00000411464 POGKQ9P215 609 aa24.71■■□□□ 1.55
MRPL55-220ENST00000411464 CABLES1Q8TDN4 633 aa24.7■■□□□ 1.54
MRPL55-220ENST00000411464 SLIT2O94813 1529 aa24.7■■□□□ 1.54
MRPL55-220ENST00000411464 KNDC1Q76NI1 1749 aa24.69■■□□□ 1.54
MRPL55-220ENST00000411464 IFT172Q9UG01 1749 aa24.69■■□□□ 1.54
MRPL55-220ENST00000411464 RALGAPBQ86X10 1494 aa24.69■■□□□ 1.54
MRPL55-220ENST00000411464 TNS3Q68CZ2 1445 aa24.69■■□□□ 1.54
MRPL55-220ENST00000411464 FMN2Q9NZ56 1722 aa24.68■■□□□ 1.54
MRPL55-220ENST00000411464 EP400Q96L91 3159 aa24.68■■□□□ 1.54
MRPL55-220ENST00000411464 KIF1AQ12756 1690 aa24.67■■□□□ 1.54
MRPL55-220ENST00000411464 CCDC9Q9Y3X0 531 aaKnown RBP24.67■■□□□ 1.54
MRPL55-220ENST00000411464 SBNO1A3KN83 1393 aa24.67■■□□□ 1.54
MRPL55-220ENST00000411464 NRXN1Q9ULB1 1477 aa24.66■■□□□ 1.54
MRPL55-220ENST00000411464 VPS72Q15906 364 aa24.66■■□□□ 1.54
MRPL55-220ENST00000411464 SEPT12Q8IYM1 358 aa24.65■■□□□ 1.54
MRPL55-220ENST00000411464 PMFBP1Q8TBY8 1022 aa24.65■■□□□ 1.54
MRPL55-220ENST00000411464 ARHGEF10O15013 1369 aa24.65■■□□□ 1.54
MRPL55-220ENST00000411464 MARF1Q9Y4F3 1742 aaKnown RBP24.64■■□□□ 1.54
MRPL55-220ENST00000411464 SF3B2Q13435 895 aaKnown RBP24.63■■□□□ 1.53
MRPL55-220ENST00000411464 BLMP54132 1417 aaPredicted RBP24.62■■□□□ 1.53
MRPL55-220ENST00000411464 TRAK1Q9UPV9 953 aa24.61■■□□□ 1.53
MRPL55-220ENST00000411464 USP32Q8NFA0 1604 aa24.61■■□□□ 1.53
MRPL55-220ENST00000411464 GLI3P10071 1580 aa24.6■■□□□ 1.53
MRPL55-220ENST00000411464 FAM83GA6ND36 823 aa24.6■■□□□ 1.53
MRPL55-220ENST00000411464 ONECUT3O60422 494 aaPredicted RBP24.6■■□□□ 1.53
MRPL55-220ENST00000411464 ANKARQ7Z5J8 1434 aa24.6■■□□□ 1.53
MRPL55-220ENST00000411464 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.59■■□□□ 1.53
MRPL55-220ENST00000411464 HIRIP3Q9BW71 556 aaPredicted RBP24.59■■□□□ 1.53
MRPL55-220ENST00000411464 KDM2AQ9Y2K7 1162 aa24.58■■□□□ 1.53
MRPL55-220ENST00000411464 A0A0G2JS52 829 aa24.57■■□□□ 1.52
MRPL55-220ENST00000411464 MYT1Q01538 1121 aa24.57■■□□□ 1.52
MRPL55-220ENST00000411464 KRT27Q7Z3Y8 459 aa24.57■■□□□ 1.52
MRPL55-220ENST00000411464 DEFB132Q7Z7B7 95 aa24.57■■□□□ 1.52
MRPL55-220ENST00000411464 DLC1Q96QB1 1528 aa24.56■■□□□ 1.52
MRPL55-220ENST00000411464 GPRASP1Q5JY77 1395 aa24.56■■□□□ 1.52
MRPL55-220ENST00000411464 RAB3GAP2Q9H2M9 1393 aa24.56■■□□□ 1.52
MRPL55-220ENST00000411464 MINK1Q8N4C8 1332 aaPredicted RBP24.56■■□□□ 1.52
MRPL55-220ENST00000411464 DCAF11Q8TEB1 546 aa24.55■■□□□ 1.52
MRPL55-220ENST00000411464 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
MRPL55-220ENST00000411464 BTG4Q9NY30 223 aa24.53■■□□□ 1.52
MRPL55-220ENST00000411464 WASLO00401 505 aaPredicted RBP24.52■■□□□ 1.52
MRPL55-220ENST00000411464 STAC3Q96MF2 364 aa24.52■■□□□ 1.52
MRPL55-220ENST00000411464 NGDNQ8NEJ9 315 aaKnown RBP24.51■■□□□ 1.51
MRPL55-220ENST00000411464 RGPD8O14715 1765 aaPredicted RBP24.51■■□□□ 1.51
MRPL55-220ENST00000411464 FAM98CQ17RN3 349 aaKnown RBP24.5■■□□□ 1.51
MRPL55-220ENST00000411464 PRR36Q9H6K5 1346 aa24.5■■□□□ 1.51
MRPL55-220ENST00000411464 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
MRPL55-220ENST00000411464 PAK3O75914 559 aaPredicted RBP24.49■■□□□ 1.51
MRPL55-220ENST00000411464 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
MRPL55-220ENST00000411464 BAG6P46379 1132 aa24.46■■□□□ 1.51
MRPL55-220ENST00000411464 NWD2Q9ULI1 1742 aa24.46■■□□□ 1.51
MRPL55-220ENST00000411464 PLCH1Q4KWH8 1693 aa24.44■■□□□ 1.5
MRPL55-220ENST00000411464 PRDM11Q9NQV5 511 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms