RNA–Protein interactions for RNA: ENST00000411404.1

RNU2-6P-201, Transcript of RNA, U2 small nuclear 6, pseudogene, humanhuman

BASIC

Gene RNU2-6P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-6P-201ENST00000411404 MTMR2Q13614 643 aa7.4□□□□□ -1.22
RNU2-6P-201ENST00000411404 CCDC27Q2M243 656 aa7.4□□□□□ -1.22
RNU2-6P-201ENST00000411404 HLA-CQ95604 372 aa7.4□□□□□ -1.22
RNU2-6P-201ENST00000411404 TFIP11Q9UBB9 837 aaKnown RBP7.4□□□□□ -1.22
RNU2-6P-201ENST00000411404 LHX6Q9UPM6 363 aa7.4□□□□□ -1.22
RNU2-6P-201ENST00000411404 E9PSI1 815 aa7.39□□□□□ -1.23
RNU2-6P-201ENST00000411404 TRIM34Q9BYJ4 488 aa7.39□□□□□ -1.23
RNU2-6P-201ENST00000411404 GCGRP47871 477 aa7.38□□□□□ -1.23
RNU2-6P-201ENST00000411404 PNMA1Q8ND90 353 aa7.38□□□□□ -1.23
RNU2-6P-201ENST00000411404 PCDHGC3Q9UN70 934 aa7.38□□□□□ -1.23
RNU2-6P-201ENST00000411404 PROX2Q3B8N5 592 aa7.37□□□□□ -1.23
RNU2-6P-201ENST00000411404 KCNH8Q96L42 1107 aa7.37□□□□□ -1.23
RNU2-6P-201ENST00000411404 VRTNQ9H8Y1 702 aa7.37□□□□□ -1.23
RNU2-6P-201ENST00000411404 BCL2L12Q9HB09 334 aa7.37□□□□□ -1.23
RNU2-6P-201ENST00000411404 PSDA5PKW4 1024 aaPredicted RBP7.36□□□□□ -1.23
RNU2-6P-201ENST00000411404 SLC4A3P48751 1232 aa7.36□□□□□ -1.23
RNU2-6P-201ENST00000411404 LHX8Q68G74 356 aa7.36□□□□□ -1.23
RNU2-6P-201ENST00000411404 CFAP99D6REC4 459 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 RNF40O75150 1001 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 SOX11P35716 441 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 GRIPAP1Q4V328 841 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 SND1Q7KZF4 910 aaKnown RBP eCLIP7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 PRR7Q8TB68 274 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 EPS8L1Q8TE68 723 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 KCNK17Q96T54 332 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 ALG2Q9H553 416 aa7.35□□□□□ -1.23
RNU2-6P-201ENST00000411404 HDGFP51858 240 aaKnown RBP7.34□□□□□ -1.23
RNU2-6P-201ENST00000411404 SWT1Q5T5J6 900 aaKnown RBP7.34□□□□□ -1.23
RNU2-6P-201ENST00000411404 UCN2Q96RP3 112 aa7.34□□□□□ -1.23
RNU2-6P-201ENST00000411404 GPR37L1O60883 481 aa7.33□□□□□ -1.24
RNU2-6P-201ENST00000411404 EIF4G2P78344 907 aaKnown RBP eCLIP7.33□□□□□ -1.24
RNU2-6P-201ENST00000411404 SRPK2P78362 688 aaKnown RBP7.33□□□□□ -1.24
RNU2-6P-201ENST00000411404 NR6A1Q15406 480 aa7.33□□□□□ -1.24
RNU2-6P-201ENST00000411404 B4GALNT3Q6L9W6 998 aa7.33□□□□□ -1.24
RNU2-6P-201ENST00000411404 ZSWIM6Q9HCJ5 1215 aa7.33□□□□□ -1.24
RNU2-6P-201ENST00000411404 ATG7O95352 703 aa7.32□□□□□ -1.24
RNU2-6P-201ENST00000411404 GPR153Q6NV75 609 aa7.32□□□□□ -1.24
RNU2-6P-201ENST00000411404 TBC1D9Q6ZT07 1266 aa7.32□□□□□ -1.24
RNU2-6P-201ENST00000411404 SLF2Q8IX21 1173 aa7.32□□□□□ -1.24
RNU2-6P-201ENST00000411404 KIAA1468Q9P260 1216 aa7.32□□□□□ -1.24
RNU2-6P-201ENST00000411404 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
RNU2-6P-201ENST00000411404 SLC10A3P09131 477 aa7.31□□□□□ -1.24
RNU2-6P-201ENST00000411404 HOXB3P14651 431 aaPredicted RBP7.31□□□□□ -1.24
RNU2-6P-201ENST00000411404 FUT2Q10981 343 aa7.31□□□□□ -1.24
RNU2-6P-201ENST00000411404 SYMPKQ92797 1274 aaKnown RBP7.31□□□□□ -1.24
RNU2-6P-201ENST00000411404 TMEM88BA6NKF7 163 aa7.3□□□□□ -1.24
RNU2-6P-201ENST00000411404 ATP9BO43861 1147 aa7.3□□□□□ -1.24
RNU2-6P-201ENST00000411404 SEPT9Q9UHD8 586 aaPredicted RBP7.3□□□□□ -1.24
RNU2-6P-201ENST00000411404 CFHP08603 1231 aa7.29□□□□□ -1.24
RNU2-6P-201ENST00000411404 IGSF3O75054 1194 aa7.28□□□□□ -1.24
RNU2-6P-201ENST00000411404 PER1O15534 1290 aaPredicted RBP7.27□□□□□ -1.25
RNU2-6P-201ENST00000411404 CCER1Q8TC90 406 aaPredicted RBP7.27□□□□□ -1.25
RNU2-6P-201ENST00000411404 NOVA2Q9UNW9 492 aaKnown RBP7.27□□□□□ -1.25
RNU2-6P-201ENST00000411404 AMOTL2Q9Y2J4 779 aa7.27□□□□□ -1.25
RNU2-6P-201ENST00000411404 POTEIP0CG38 1075 aa7.26□□□□□ -1.25
RNU2-6P-201ENST00000411404 SKIP12755 728 aa7.26□□□□□ -1.25
RNU2-6P-201ENST00000411404 PIK3CDO00329 1044 aa7.25□□□□□ -1.25
RNU2-6P-201ENST00000411404 ATP6V1AP38606 617 aa7.25□□□□□ -1.25
RNU2-6P-201ENST00000411404 NR1H3Q13133 447 aa7.25□□□□□ -1.25
RNU2-6P-201ENST00000411404 TMEM164Q5U3C3 297 aa7.25□□□□□ -1.25
RNU2-6P-201ENST00000411404 STK32AQ8WU08 396 aa7.25□□□□□ -1.25
RNU2-6P-201ENST00000411404 USP17L3A6NCW0 530 aa7.24□□□□□ -1.25
RNU2-6P-201ENST00000411404 USP17L4A6NCW7 530 aa7.24□□□□□ -1.25
RNU2-6P-201ENST00000411404 KMT5BQ4FZB7 885 aa7.24□□□□□ -1.25
RNU2-6P-201ENST00000411404 USP17L2Q6R6M4 530 aa7.24□□□□□ -1.25
RNU2-6P-201ENST00000411404 USP17L1Q7RTZ2 530 aa7.24□□□□□ -1.25
RNU2-6P-201ENST00000411404 RETREG3Q86VR2 466 aa7.24□□□□□ -1.25
RNU2-6P-201ENST00000411404 USP35Q9P2H5 1018 aa7.24□□□□□ -1.25
RNU2-6P-201ENST00000411404 LOC105371045A0A1W2PR82 267 aa7.23□□□□□ -1.25
RNU2-6P-201ENST00000411404 SAMD7Q7Z3H4 446 aa7.23□□□□□ -1.25
RNU2-6P-201ENST00000411404 DEPDC4Q8N2C3 294 aa7.23□□□□□ -1.25
RNU2-6P-201ENST00000411404 ZBED2Q9BTP6 218 aa7.23□□□□□ -1.25
RNU2-6P-201ENST00000411404 ZMIZ1Q9ULJ6 1067 aa7.23□□□□□ -1.25
RNU2-6P-201ENST00000411404 GNEQ9Y223 722 aaKnown RBP7.23□□□□□ -1.25
RNU2-6P-201ENST00000411404 ZBBXA8MT70 800 aa7.22□□□□□ -1.25
RNU2-6P-201ENST00000411404 USP17L5A8MUK1 530 aa7.22□□□□□ -1.25
RNU2-6P-201ENST00000411404 FBXO45P0C2W1 286 aa7.22□□□□□ -1.25
RNU2-6P-201ENST00000411404 PSEN2P49810 448 aa7.22□□□□□ -1.25
RNU2-6P-201ENST00000411404 PUS10Q3MIT2 529 aaKnown RBP7.22□□□□□ -1.25
RNU2-6P-201ENST00000411404 KANK4Q5T7N3 995 aaPredicted RBP7.22□□□□□ -1.25
RNU2-6P-201ENST00000411404 ELOAQ14241 798 aaKnown RBP7.21□□□□□ -1.26
RNU2-6P-201ENST00000411404 FAM98CQ17RN3 349 aaKnown RBP7.21□□□□□ -1.26
RNU2-6P-201ENST00000411404 Q3C1V9 767 aa7.21□□□□□ -1.26
RNU2-6P-201ENST00000411404 LARP1Q6PKG0 1096 aaKnown RBP7.21□□□□□ -1.26
RNU2-6P-201ENST00000411404 SCUBE2Q9NQ36 999 aa7.21□□□□□ -1.26
RNU2-6P-201ENST00000411404 RABGEF1Q9UJ41 708 aa7.21□□□□□ -1.26
RNU2-6P-201ENST00000411404 SHROOM4Q9ULL8 1493 aa7.21□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L15C9J2P7 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L10C9JJH3 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L13C9JLJ4 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L12C9JPN9 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L11C9JVI0 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L21D6R901 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L18D6R9N7 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L22D6RA61 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L17D6RBQ6 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L19D6RCP7 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L20D6RJB6 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 USP17L24Q0WX57 530 aa7.2□□□□□ -1.26
RNU2-6P-201ENST00000411404 SLFNL1Q499Z3 407 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms