RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CCDC27Q2M243 656 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 API5Q9BZZ5 524 aaKnown RBP6.2□□□□□ -1.42
SCN3A-203ENST00000409101 SAMD1Q6SPF0 538 aaPredicted RBP6.2□□□□□ -1.42
SCN3A-203ENST00000409101 DAPK1P53355 1430 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 MSH6P52701 1360 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 RILPL2Q969X0 211 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 CHMP4CQ96CF2 233 aa6.2□□□□□ -1.42
SCN3A-203ENST00000409101 PLIN1O60240 522 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 CHAF1AQ13111 956 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-203ENST00000409101 ANKRD30BQ9BXX2 1392 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 ZC3H6P61129 1189 aaKnown RBP6.19□□□□□ -1.42
SCN3A-203ENST00000409101 WWC1Q8IX03 1113 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 KRI1Q8N9T8 703 aaKnown RBP6.19□□□□□ -1.42
SCN3A-203ENST00000409101 FYB1O15117 783 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 MTHFSP49914 203 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 PNISRQ8TF01 805 aaKnown RBP6.19□□□□□ -1.42
SCN3A-203ENST00000409101 DIAPH3Q9NSV4 1193 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 KIF3AQ9Y496 699 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 TNRQ92752 1358 aa6.19□□□□□ -1.42
SCN3A-203ENST00000409101 ZNF530Q6P9A1 599 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-203ENST00000409101 AMOTL2Q9Y2J4 779 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 HSP90AB4PQ58FF6 505 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 CCDC30Q5VVM6 783 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 SPRYD3Q8NCJ5 442 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 ANO8Q9HCE9 1232 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-203ENST00000409101 ASXL2Q76L83 1435 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 ARAP1Q96P48 1450 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 PRXQ9BXM0 1461 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 FAM135AQ9P2D6 1515 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 KIAA1107Q9UPP5 1409 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 ERICH2A1L162 156 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 NEUROD6Q96NK8 337 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 GNL3LQ9NVN8 582 aaKnown RBP6.18□□□□□ -1.42
SCN3A-203ENST00000409101 BCL2L13Q9BXK5 485 aa6.18□□□□□ -1.42
SCN3A-203ENST00000409101 KIF16BQ96L93 1317 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 FBXO31Q5XUX0 539 aaPredicted RBP6.17□□□□□ -1.42
SCN3A-203ENST00000409101 RUFY2Q8WXA3 655 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 NUDT16Q96DE0 195 aaKnown RBP6.17□□□□□ -1.42
SCN3A-203ENST00000409101 ATAD2Q6PL18 1390 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 APAF1O14727 1248 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 MFAP1P55081 439 aaKnown RBP6.17□□□□□ -1.42
SCN3A-203ENST00000409101 TPM4P67936 248 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 BICDL1Q6ZP65 573 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 PRM3Q9NNZ6 103 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 CAMSAP2Q08AD1 1489 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 ZPR1O75312 459 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 L1TD1Q5T7N2 865 aaKnown RBP6.17□□□□□ -1.42
SCN3A-203ENST00000409101 TMOD3Q9NYL9 352 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 PHF8Q9UPP1 1060 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 TCERG1O14776 1098 aaKnown RBP6.17□□□□□ -1.42
SCN3A-203ENST00000409101 DRC7Q8IY82 874 aa6.17□□□□□ -1.42
SCN3A-203ENST00000409101 RBM5P52756 815 aaKnown RBP eCLIP6.16□□□□□ -1.42
SCN3A-203ENST00000409101 TRDNQ13061 729 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 ANKRD45Q5TZF3 282 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 NOL8Q76FK4 1167 aaKnown RBP6.16□□□□□ -1.42
SCN3A-203ENST00000409101 CADPS2Q86UW7 1296 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 CNNM1Q9NRU3 951 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 CNKSR2Q8WXI2 1034 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 DNTTIP2Q5QJE6 756 aaKnown RBP6.16□□□□□ -1.42
SCN3A-203ENST00000409101 NFXL1Q6ZNB6 911 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 CCDC43Q96MW1 224 aaKnown RBP6.16□□□□□ -1.42
SCN3A-203ENST00000409101 CSPP1Q1MSJ5 1256 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 KRT28Q7Z3Y7 464 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 TBC1D2BQ9UPU7 963 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 STARD3NLO95772 234 aa6.16□□□□□ -1.42
SCN3A-203ENST00000409101 UBTFL1P0CB47 393 aaPredicted RBP6.16□□□□□ -1.42
SCN3A-203ENST00000409101 IKQ13123 557 aaPredicted RBP6.15□□□□□ -1.42
SCN3A-203ENST00000409101 BCL11BQ9C0K0 894 aaPredicted RBP6.15□□□□□ -1.42
SCN3A-203ENST00000409101 LMTK3Q96Q04 1460 aa6.15□□□□□ -1.42
SCN3A-203ENST00000409101 H3BQV1 296 aa6.15□□□□□ -1.42
SCN3A-203ENST00000409101 TRIM29Q14134 588 aa6.15□□□□□ -1.42
SCN3A-203ENST00000409101 IFFO2Q5TF58 517 aa6.15□□□□□ -1.42
SCN3A-203ENST00000409101 ZNF652Q9Y2D9 606 aa6.15□□□□□ -1.42
SCN3A-203ENST00000409101 WASHC4Q2M389 1173 aa6.15□□□□□ -1.42
SCN3A-203ENST00000409101 EXOC5O00471 708 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 ERC2O15083 957 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 PRKAR2BP31323 418 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 SULT6B1Q6IMI4 303 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 CPLX2Q6PUV4 134 aaKnown RBP6.15□□□□□ -1.43
SCN3A-203ENST00000409101 DDX19BQ9UMR2 479 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 CNTLNQ9NXG0 1405 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 FAM184AQ8NB25 1140 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 SLC3A2P08195 630 aaKnown RBP6.15□□□□□ -1.43
SCN3A-203ENST00000409101 WAPLQ7Z5K2 1190 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 WDR7Q9Y4E6 1490 aa6.15□□□□□ -1.43
SCN3A-203ENST00000409101 BTBD11A6QL63 1104 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 AMER1Q5JTC6 1135 aaPredicted RBP6.14□□□□□ -1.43
SCN3A-203ENST00000409101 PAXIP1Q6ZW49 1069 aaPredicted RBP6.14□□□□□ -1.43
SCN3A-203ENST00000409101 TTC39AQ5SRH9 613 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 TIAM1Q13009 1591 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 PTMSP20962 102 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 SF3A1Q15459 793 aaKnown RBP6.14□□□□□ -1.43
SCN3A-203ENST00000409101 AK7Q96M32 723 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 ST18O60284 1047 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 CREBRFQ8IUR6 639 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 C8orf37Q96NL8 207 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 ANO2Q9NQ90 1003 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 UNC13AQ9UPW8 1703 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 MYL6BP14649 208 aa6.14□□□□□ -1.43
SCN3A-203ENST00000409101 FOXO3O43524 673 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms