RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 FAM161AQ3B820 660 aa5.94□□□□□ -1.46
PCDH11X-207ENST00000406881 ADGBQ8N7X0 1667 aa5.94□□□□□ -1.46
PCDH11X-207ENST00000406881 IPO9Q96P70 1041 aaKnown RBP5.94□□□□□ -1.46
PCDH11X-207ENST00000406881 COG6Q9Y2V7 657 aa5.94□□□□□ -1.46
PCDH11X-207ENST00000406881 NLRP6P59044 892 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 CCDC184Q52MB2 194 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 GAS2L2Q8NHY3 880 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 NEO1Q92859 1461 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 ATF3P18847 181 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 ZNF428Q96B54 188 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 GPATCH3Q96I76 525 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 ATP7AQ04656 1500 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 PTMSP20962 102 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 PDE4AP27815 886 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 MBD5Q9P267 1494 aa5.93□□□□□ -1.46
PCDH11X-207ENST00000406881 FCHSD2O94868 740 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 KCNJ4P48050 445 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 MAST1Q9Y2H9 1570 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 KIAA1211Q6ZU35 1233 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 NUDT16Q96DE0 195 aaKnown RBP5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 BCL2L13Q9BXK5 485 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 PRKAR2BP31323 418 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 SLC4A10Q6U841 1118 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 CDCA7LQ96GN5 454 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 FANCIQ9NVI1 1328 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 ABCC11Q96J66 1382 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 DISP3Q9P2K9 1392 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 TNRQ92752 1358 aa5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 FBXO31Q5XUX0 539 aaPredicted RBP5.92□□□□□ -1.46
PCDH11X-207ENST00000406881 HMOX1P09601 288 aa5.91□□□□□ -1.46
PCDH11X-207ENST00000406881 ELL2O00472 640 aaPredicted RBP5.91□□□□□ -1.46
PCDH11X-207ENST00000406881 WASLO00401 505 aaPredicted RBP5.91□□□□□ -1.46
PCDH11X-207ENST00000406881 SLFN5Q08AF3 891 aa5.91□□□□□ -1.46
PCDH11X-207ENST00000406881 PROSER2Q86WR7 435 aaPredicted RBP5.91□□□□□ -1.46
PCDH11X-207ENST00000406881 CFAP74Q9C0B2 1584 aa5.91□□□□□ -1.46
PCDH11X-207ENST00000406881 SLC26A8Q96RN1 970 aa5.9□□□□□ -1.46
PCDH11X-207ENST00000406881 TSPYL4Q9UJ04 414 aa5.9□□□□□ -1.46
PCDH11X-207ENST00000406881 MYO5CQ9NQX4 1742 aa5.9□□□□□ -1.46
PCDH11X-207ENST00000406881 ANKRD36BQ8N2N9 1353 aa5.9□□□□□ -1.46
PCDH11X-207ENST00000406881 DDX58O95786 925 aaKnown RBP5.9□□□□□ -1.46
PCDH11X-207ENST00000406881 ABTB2Q8N961 1025 aa5.9□□□□□ -1.46
PCDH11X-207ENST00000406881 TESK2Q96S53 571 aa5.9□□□□□ -1.46
PCDH11X-207ENST00000406881 PARD3Q8TEW0 1356 aa5.9□□□□□ -1.47
PCDH11X-207ENST00000406881 APBB1O00213 710 aa5.9□□□□□ -1.47
PCDH11X-207ENST00000406881 RAPGEF4Q8WZA2 1011 aa5.9□□□□□ -1.47
PCDH11X-207ENST00000406881 ASXL1Q8IXJ9 1541 aa5.9□□□□□ -1.47
PCDH11X-207ENST00000406881 PLEKHO1Q53GL0 409 aaPredicted RBP5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 FGD1P98174 961 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 EXOSC9Q06265 439 aaKnown RBP5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 NEXNQ0ZGT2 675 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 ANKRD45Q5TZF3 282 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 ATP10AO60312 1499 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 MFAP1P55081 439 aaKnown RBP5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 NFE2L2Q16236 605 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 TTC5Q8N0Z6 440 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 GBP4Q96PP9 640 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 NPC1L1Q9UHC9 1359 aa5.89□□□□□ -1.47
PCDH11X-207ENST00000406881 ADCY10Q96PN6 1610 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 ESCO1Q5FWF5 840 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 WWC1Q8IX03 1113 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 ARAP3Q8WWN8 1544 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 PREX2Q70Z35 1606 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 TMPOP42166 694 aaKnown RBP5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 EVA1CP58658 441 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 HSP90AB4PQ58FF6 505 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 AMER1Q5JTC6 1135 aaPredicted RBP5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 WAPLQ7Z5K2 1190 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 COL17A1Q9UMD9 1497 aaPredicted RBP5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 RIMS2Q9UQ26 1411 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 SAMD9LQ8IVG5 1584 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 CCDC30Q5VVM6 783 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 SULT6B1Q6IMI4 303 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 KCNH5Q8NCM2 988 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 NPHP1O15259 732 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 TWISTNBQ3B726 338 aaPredicted RBP5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 PANK1Q8TE04 598 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 CHD1O14646 1710 aa5.88□□□□□ -1.47
PCDH11X-207ENST00000406881 GNAI3P08754 354 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 FKBP5Q13451 457 aaPredicted RBP5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 TRIM44Q96DX7 344 aaPredicted RBP5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 ABCC1P33527 1531 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 INSRP06213 1382 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 KDM5DQ9BY66 1539 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 TRIM6-TRIM34B2RNG4 842 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 L1TD1Q5T7N2 865 aaKnown RBP5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 USP35Q9P2H5 1018 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 AMOTL2Q9Y2J4 779 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 PIK3C2GO75747 1445 aa5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 POLR3AO14802 1390 aaPredicted RBP5.87□□□□□ -1.47
PCDH11X-207ENST00000406881 ST18O60284 1047 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 MLH3Q9UHC1 1453 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 IL16Q14005 1332 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 REC8O95072 547 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 TAF7LQ5H9L4 462 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 ATF7IPQ6VMQ6 1270 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 GCC1Q96CN9 775 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 NLRP2Q9NX02 1062 aa5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 C9orf78Q9NZ63 289 aaPredicted RBP5.86□□□□□ -1.47
PCDH11X-207ENST00000406881 NKTRP30414 1462 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms