RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 TMEM132EQ6IEE7 984 aa22.67■■□□□ 1.22
TPM1-207ENST00000403994 STK26Q9P289 416 aa22.67■■□□□ 1.22
TPM1-207ENST00000403994 ADGRB1O14514 1584 aa22.65■■□□□ 1.22
TPM1-207ENST00000403994 HRCP23327 699 aa22.64■■□□□ 1.21
TPM1-207ENST00000403994 MEX3CQ5U5Q3 659 aaKnown RBP22.64■■□□□ 1.21
TPM1-207ENST00000403994 ORAI2Q96SN7 254 aa22.64■■□□□ 1.21
TPM1-207ENST00000403994 COL22A1Q8NFW1 1626 aaPredicted RBP22.64■■□□□ 1.21
TPM1-207ENST00000403994 WAPLQ7Z5K2 1190 aa22.63■■□□□ 1.21
TPM1-207ENST00000403994 LRRC59Q96AG4 307 aaKnown RBP22.63■■□□□ 1.21
TPM1-207ENST00000403994 C14orf93Q9H972 538 aaKnown RBP22.63■■□□□ 1.21
TPM1-207ENST00000403994 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
TPM1-207ENST00000403994 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
TPM1-207ENST00000403994 PXDNQ92626 1479 aa22.61■■□□□ 1.21
TPM1-207ENST00000403994 SOS2Q07890 1332 aaPredicted RBP22.6■■□□□ 1.21
TPM1-207ENST00000403994 NUTM2BA6NNL0 878 aaPredicted RBP22.6■■□□□ 1.21
TPM1-207ENST00000403994 NUTM2EB1AL46 878 aaPredicted RBP22.6■■□□□ 1.21
TPM1-207ENST00000403994 CFAP70Q5T0N1 1121 aa22.6■■□□□ 1.21
TPM1-207ENST00000403994 NUTM2AQ8IVF1 878 aaPredicted RBP22.6■■□□□ 1.21
TPM1-207ENST00000403994 ADGRB2O60241 1585 aa22.59■■□□□ 1.21
TPM1-207ENST00000403994 DHX57Q6P158 1386 aaKnown RBP22.59■■□□□ 1.21
TPM1-207ENST00000403994 RGPD8O14715 1765 aaPredicted RBP22.58■■□□□ 1.2
TPM1-207ENST00000403994 ESCO1Q5FWF5 840 aa22.55■■□□□ 1.2
TPM1-207ENST00000403994 ZNF772Q68DY9 489 aaPredicted RBP22.55■■□□□ 1.2
TPM1-207ENST00000403994 SIRT1Q96EB6 747 aa22.55■■□□□ 1.2
TPM1-207ENST00000403994 NPHP3Q7Z494 1330 aa22.55■■□□□ 1.2
TPM1-207ENST00000403994 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
TPM1-207ENST00000403994 USP32Q8NFA0 1604 aa22.53■■□□□ 1.2
TPM1-207ENST00000403994 MARF1Q9Y4F3 1742 aaKnown RBP22.53■■□□□ 1.2
TPM1-207ENST00000403994 AFF2P51816 1311 aa22.53■■□□□ 1.2
TPM1-207ENST00000403994 NUTM2FA1L443 756 aa22.52■■□□□ 1.2
TPM1-207ENST00000403994 DCAF11Q8TEB1 546 aa22.51■■□□□ 1.19
TPM1-207ENST00000403994 PRAM1Q96QH2 718 aa22.51■■□□□ 1.19
TPM1-207ENST00000403994 KIAA1210Q9ULL0 1709 aa22.49■■□□□ 1.19
TPM1-207ENST00000403994 C8orf37Q96NL8 207 aa22.49■■□□□ 1.19
TPM1-207ENST00000403994 KDM2AQ9Y2K7 1162 aa22.49■■□□□ 1.19
TPM1-207ENST00000403994 SAFB2Q14151 953 aaKnown RBP eCLIP22.48■■□□□ 1.19
TPM1-207ENST00000403994 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
TPM1-207ENST00000403994 FOXO3O43524 673 aa22.47■■□□□ 1.19
TPM1-207ENST00000403994 XPCQ01831 940 aaPredicted RBP22.47■■□□□ 1.19
TPM1-207ENST00000403994 STAC3Q96MF2 364 aa22.46■■□□□ 1.19
TPM1-207ENST00000403994 ANKARQ7Z5J8 1434 aa22.46■■□□□ 1.19
TPM1-207ENST00000403994 ADAMTS2O95450 1211 aa22.45■■□□□ 1.18
TPM1-207ENST00000403994 ABCA3Q99758 1704 aa22.45■■□□□ 1.18
TPM1-207ENST00000403994 TULP4Q9NRJ4 1543 aa22.44■■□□□ 1.18
TPM1-207ENST00000403994 POGKQ9P215 609 aa22.43■■□□□ 1.18
TPM1-207ENST00000403994 TRAK1Q9UPV9 953 aa22.43■■□□□ 1.18
TPM1-207ENST00000403994 TNS3Q68CZ2 1445 aa22.41■■□□□ 1.18
TPM1-207ENST00000403994 TRPM3Q9HCF6 1732 aaPredicted RBP22.41■■□□□ 1.18
TPM1-207ENST00000403994 RXRBP28702 533 aa22.41■■□□□ 1.18
TPM1-207ENST00000403994 RGS12O14924 1447 aa22.4■■□□□ 1.18
TPM1-207ENST00000403994 ITSN1Q15811 1721 aa22.4■■□□□ 1.18
TPM1-207ENST00000403994 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.4■■□□□ 1.18
TPM1-207ENST00000403994 SPATA31A3Q5VYP0 1347 aa22.39■■□□□ 1.18
TPM1-207ENST00000403994 PHF8Q9UPP1 1060 aa22.39■■□□□ 1.17
TPM1-207ENST00000403994 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
TPM1-207ENST00000403994 NGLY1Q96IV0 654 aa22.38■■□□□ 1.17
TPM1-207ENST00000403994 HIRIP3Q9BW71 556 aaPredicted RBP22.38■■□□□ 1.17
TPM1-207ENST00000403994 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
TPM1-207ENST00000403994 TOPAZ1Q8N9V7 1692 aa22.36■■□□□ 1.17
TPM1-207ENST00000403994 ALS2Q96Q42 1657 aa22.36■■□□□ 1.17
TPM1-207ENST00000403994 ATP7BP35670 1465 aa22.35■■□□□ 1.17
TPM1-207ENST00000403994 EP400Q96L91 3159 aa22.35■■□□□ 1.17
TPM1-207ENST00000403994 ATRNO75882 1429 aa22.35■■□□□ 1.17
TPM1-207ENST00000403994 KRT28Q7Z3Y7 464 aa22.35■■□□□ 1.17
TPM1-207ENST00000403994 QTRT2Q9H974 415 aaKnown RBP22.35■■□□□ 1.17
TPM1-207ENST00000403994 SBNO1A3KN83 1393 aa22.35■■□□□ 1.17
TPM1-207ENST00000403994 PRR36Q9H6K5 1346 aa22.34■■□□□ 1.17
TPM1-207ENST00000403994 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
TPM1-207ENST00000403994 RBM6P78332 1123 aaKnown RBP22.33■■□□□ 1.17
TPM1-207ENST00000403994 FNBP4Q8N3X1 1017 aaPredicted RBP22.33■■□□□ 1.17
TPM1-207ENST00000403994 USP21Q9UK80 565 aa22.33■■□□□ 1.17
TPM1-207ENST00000403994 BCL9LQ86UU0 1499 aa22.33■■□□□ 1.16
TPM1-207ENST00000403994 CRYBG1Q9Y4K1 1723 aa22.31■■□□□ 1.16
TPM1-207ENST00000403994 ARHGEF10O15013 1369 aa22.31■■□□□ 1.16
TPM1-207ENST00000403994 WASLO00401 505 aaPredicted RBP22.31■■□□□ 1.16
TPM1-207ENST00000403994 PSME1Q06323 249 aa22.3■■□□□ 1.16
TPM1-207ENST00000403994 PMFBP1Q8TBY8 1022 aa22.3■■□□□ 1.16
TPM1-207ENST00000403994 SLIT2O94813 1529 aa22.3■■□□□ 1.16
TPM1-207ENST00000403994 QRICH2Q9H0J4 1663 aa22.3■■□□□ 1.16
TPM1-207ENST00000403994 NWD2Q9ULI1 1742 aa22.29■■□□□ 1.16
TPM1-207ENST00000403994 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
TPM1-207ENST00000403994 TRPC5Q9UL62 973 aaPredicted RBP22.28■■□□□ 1.16
TPM1-207ENST00000403994 GLI3P10071 1580 aa22.25■■□□□ 1.15
TPM1-207ENST00000403994 NBPF1Q3BBV0 1214 aa22.25■■□□□ 1.15
TPM1-207ENST00000403994 UPF1Q92900 1129 aaKnown RBP eCLIP22.25■■□□□ 1.15
TPM1-207ENST00000403994 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
TPM1-207ENST00000403994 NRAPQ86VF7 1730 aa22.23■■□□□ 1.15
TPM1-207ENST00000403994 LMOD2Q6P5Q4 547 aa22.22■■□□□ 1.15
TPM1-207ENST00000403994 CABLES1Q8TDN4 633 aa22.22■■□□□ 1.15
TPM1-207ENST00000403994 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
TPM1-207ENST00000403994 PHRF1Q9P1Y6 1649 aaKnown RBP22.21■■□□□ 1.15
TPM1-207ENST00000403994 HAP1P54257 671 aaPredicted RBP22.21■■□□□ 1.15
TPM1-207ENST00000403994 L3MBTL2Q969R5 705 aa22.21■■□□□ 1.15
TPM1-207ENST00000403994 SIN3AQ96ST3 1273 aa22.2■■□□□ 1.14
TPM1-207ENST00000403994 COL14A1Q05707 1796 aaKnown RBP22.2■■□□□ 1.14
TPM1-207ENST00000403994 PLEKHG5O94827 1062 aa22.19■■□□□ 1.14
TPM1-207ENST00000403994 NUDT16Q96DE0 195 aaKnown RBP22.19■■□□□ 1.14
TPM1-207ENST00000403994 CENPJQ9HC77 1338 aaPredicted RBP22.18■■□□□ 1.14
TPM1-207ENST00000403994 UNC5CLQ8IV45 518 aa22.18■■□□□ 1.14
TPM1-207ENST00000403994 NGDNQ8NEJ9 315 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms