RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 CGNL1Q0VF96 1302 aa23.62■■□□□ 1.37
CHTOP-205ENST00000403433 ALKQ9UM73 1620 aa23.61■■□□□ 1.37
CHTOP-205ENST00000403433 ZNF521Q96K83 1311 aa23.61■■□□□ 1.37
CHTOP-205ENST00000403433 STK26Q9P289 416 aa23.61■■□□□ 1.37
CHTOP-205ENST00000403433 YTHDC2Q9H6S0 1430 aaKnown RBP23.6■■□□□ 1.37
CHTOP-205ENST00000403433 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
CHTOP-205ENST00000403433 NINLQ9Y2I6 1382 aa23.6■■□□□ 1.37
CHTOP-205ENST00000403433 SHPRHQ149N8 1683 aa23.59■■□□□ 1.37
CHTOP-205ENST00000403433 GOLGA2Q08379 1002 aa23.59■■□□□ 1.37
CHTOP-205ENST00000403433 SAFB2Q14151 953 aaKnown RBP eCLIP23.59■■□□□ 1.37
CHTOP-205ENST00000403433 SENP3Q9H4L4 574 aaPredicted RBP23.59■■□□□ 1.37
CHTOP-205ENST00000403433 NSD2O96028 1365 aa23.58■■□□□ 1.37
CHTOP-205ENST00000403433 EXOC6Q8TAG9 804 aa23.57■■□□□ 1.36
CHTOP-205ENST00000403433 CABP2Q9NPB3 220 aa23.57■■□□□ 1.36
CHTOP-205ENST00000403433 A2ML1A8K2U0 1454 aa23.56■■□□□ 1.36
CHTOP-205ENST00000403433 MLECQ14165 292 aa23.55■■□□□ 1.36
CHTOP-205ENST00000403433 DUSP27Q5VZP5 1158 aa23.55■■□□□ 1.36
CHTOP-205ENST00000403433 ATAD2Q6PL18 1390 aa23.54■■□□□ 1.36
CHTOP-205ENST00000403433 APAF1O14727 1248 aa23.54■■□□□ 1.36
CHTOP-205ENST00000403433 SRPK2P78362 688 aaKnown RBP23.54■■□□□ 1.36
CHTOP-205ENST00000403433 NGEFQ8N5V2 710 aa23.54■■□□□ 1.36
CHTOP-205ENST00000403433 POGKQ9P215 609 aa23.54■■□□□ 1.36
CHTOP-205ENST00000403433 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
CHTOP-205ENST00000403433 PRAM1Q96QH2 718 aa23.53■■□□□ 1.36
CHTOP-205ENST00000403433 RIMS2Q9UQ26 1411 aa23.52■■□□□ 1.36
CHTOP-205ENST00000403433 SLFN5Q08AF3 891 aa23.51■■□□□ 1.35
CHTOP-205ENST00000403433 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
CHTOP-205ENST00000403433 CFAP53Q96M91 514 aa23.5■■□□□ 1.35
CHTOP-205ENST00000403433 SETD1AO15047 1707 aaKnown RBP23.5■■□□□ 1.35
CHTOP-205ENST00000403433 A0A1W2PP64 1363 aa23.5■■□□□ 1.35
CHTOP-205ENST00000403433 PLIN1O60240 522 aa23.49■■□□□ 1.35
CHTOP-205ENST00000403433 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
CHTOP-205ENST00000403433 ESF1Q9H501 851 aaKnown RBP23.49■■□□□ 1.35
CHTOP-205ENST00000403433 ABCC11Q96J66 1382 aa23.49■■□□□ 1.35
CHTOP-205ENST00000403433 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
CHTOP-205ENST00000403433 ANKRD26Q9UPS8 1709 aa23.48■■□□□ 1.35
CHTOP-205ENST00000403433 MTHFSP49914 203 aa23.47■■□□□ 1.35
CHTOP-205ENST00000403433 NKTRP30414 1462 aaKnown RBP23.46■■□□□ 1.35
CHTOP-205ENST00000403433 TRMT2AQ8IZ69 625 aaKnown RBP23.46■■□□□ 1.35
CHTOP-205ENST00000403433 E9PSI1 815 aa23.45■■□□□ 1.35
CHTOP-205ENST00000403433 TERF2IPQ9NYB0 399 aa23.45■■□□□ 1.35
CHTOP-205ENST00000403433 CRBNQ96SW2 442 aa23.44■■□□□ 1.34
CHTOP-205ENST00000403433 ZMYM3Q14202 1370 aa23.44■■□□□ 1.34
CHTOP-205ENST00000403433 IQSEC2Q5JU85 1478 aa23.43■■□□□ 1.34
CHTOP-205ENST00000403433 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.43■■□□□ 1.34
CHTOP-205ENST00000403433 RUNDC1Q96C34 613 aa23.43■■□□□ 1.34
CHTOP-205ENST00000403433 NRXN3Q9Y4C0 1643 aa23.42■■□□□ 1.34
CHTOP-205ENST00000403433 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
CHTOP-205ENST00000403433 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.41■■□□□ 1.34
CHTOP-205ENST00000403433 MED14O60244 1454 aa23.41■■□□□ 1.34
CHTOP-205ENST00000403433 KIF20BQ96Q89 1820 aa23.4■■□□□ 1.34
CHTOP-205ENST00000403433 CDK19Q9BWU1 502 aa23.4■■□□□ 1.34
CHTOP-205ENST00000403433 HDGFL2Q7Z4V5 671 aaPredicted RBP23.39■■□□□ 1.34
CHTOP-205ENST00000403433 SPINK5Q9NQ38 1064 aaPredicted RBP23.39■■□□□ 1.34
CHTOP-205ENST00000403433 WWC1Q8IX03 1113 aa23.38■■□□□ 1.33
CHTOP-205ENST00000403433 TNRQ92752 1358 aa23.37■■□□□ 1.33
CHTOP-205ENST00000403433 C20orf194Q5TEA3 1177 aa23.37■■□□□ 1.33
CHTOP-205ENST00000403433 KNDC1Q76NI1 1749 aa23.36■■□□□ 1.33
CHTOP-205ENST00000403433 GGNBP2Q9H3C7 697 aa23.35■■□□□ 1.33
CHTOP-205ENST00000403433 NLRP1Q9C000 1473 aa23.35■■□□□ 1.33
CHTOP-205ENST00000403433 MYT1Q01538 1121 aa23.35■■□□□ 1.33
CHTOP-205ENST00000403433 DMRT2Q9Y5R5 561 aa23.35■■□□□ 1.33
CHTOP-205ENST00000403433 ATP7BP35670 1465 aa23.34■■□□□ 1.33
CHTOP-205ENST00000403433 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
CHTOP-205ENST00000403433 HDGFP51858 240 aaKnown RBP23.33■■□□□ 1.33
CHTOP-205ENST00000403433 UBR1Q8IWV7 1749 aa23.33■■□□□ 1.33
CHTOP-205ENST00000403433 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.32
CHTOP-205ENST00000403433 ADGRB2O60241 1585 aa23.32■■□□□ 1.32
CHTOP-205ENST00000403433 FYB1O15117 783 aa23.32■■□□□ 1.32
CHTOP-205ENST00000403433 U2AF1L5P0DN76 240 aaPredicted RBP23.32■■□□□ 1.32
CHTOP-205ENST00000403433 U2AF1Q01081 240 aaKnown RBP eCLIP23.32■■□□□ 1.327e-8■■■■■ 27.9
CHTOP-205ENST00000403433 CABP1Q9NZU7 370 aa23.32■■□□□ 1.32
CHTOP-205ENST00000403433 NEUROD2Q15784 382 aa23.31■■□□□ 1.32
CHTOP-205ENST00000403433 ANP32EQ9BTT0 268 aa23.31■■□□□ 1.32
CHTOP-205ENST00000403433 RRP7AQ9Y3A4 280 aaKnown RBP23.31■■□□□ 1.32
CHTOP-205ENST00000403433 COL3A1P02461 1466 aaPredicted RBP23.31■■□□□ 1.32
CHTOP-205ENST00000403433 TCERG1O14776 1098 aaKnown RBP23.3■■□□□ 1.32
CHTOP-205ENST00000403433 METP08581 1390 aa23.3■■□□□ 1.32
CHTOP-205ENST00000403433 CCDC27Q2M243 656 aa23.29■■□□□ 1.32
CHTOP-205ENST00000403433 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
CHTOP-205ENST00000403433 WDR63Q8IWG1 891 aa23.29■■□□□ 1.32
CHTOP-205ENST00000403433 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
CHTOP-205ENST00000403433 MSH5O43196 834 aa23.27■■□□□ 1.32
CHTOP-205ENST00000403433 CPS1P31327 1500 aa23.27■■□□□ 1.32
CHTOP-205ENST00000403433 FAM135BQ49AJ0 1406 aa23.27■■□□□ 1.32
CHTOP-205ENST00000403433 TECPR2O15040 1411 aa23.26■■□□□ 1.31
CHTOP-205ENST00000403433 TMEM2Q9UHN6 1383 aa23.26■■□□□ 1.31
CHTOP-205ENST00000403433 BCAR3O75815 825 aa23.25■■□□□ 1.31
CHTOP-205ENST00000403433 U2SURPO15042 1029 aaKnown RBP23.24■■□□□ 1.31
CHTOP-205ENST00000403433 WASLO00401 505 aaPredicted RBP23.23■■□□□ 1.31
CHTOP-205ENST00000403433 MS4A1P11836 297 aa23.23■■□□□ 1.31
CHTOP-205ENST00000403433 PPIP5K1Q6PFW1 1433 aa23.22■■□□□ 1.31
CHTOP-205ENST00000403433 TXNDC2Q86VQ3 553 aa23.22■■□□□ 1.31
CHTOP-205ENST00000403433 SIRT1Q96EB6 747 aa23.22■■□□□ 1.31
CHTOP-205ENST00000403433 CENPQQ7L2Z9 268 aaPredicted RBP23.21■■□□□ 1.31
CHTOP-205ENST00000403433 KDM2BQ8NHM5 1336 aa23.21■■□□□ 1.31
CHTOP-205ENST00000403433 EDC4Q6P2E9 1401 aaKnown RBP23.21■■□□□ 1.31
CHTOP-205ENST00000403433 CDC42BPGQ6DT37 1551 aa23.21■■□□□ 1.31
CHTOP-205ENST00000403433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.2■■□□□ 1.3
CHTOP-205ENST00000403433 MYH16Q9H6N6 1097 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms