RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 RPGRIP1LQ68CZ1 1315 aa21.79■■□□□ 1.08
SNED1-204ENST00000401884 CDK19Q9BWU1 502 aa21.78■■□□□ 1.08
SNED1-204ENST00000401884 ATF7IPQ6VMQ6 1270 aa21.78■■□□□ 1.08
SNED1-204ENST00000401884 CHMP3Q9Y3E7 222 aa21.77■■□□□ 1.08
SNED1-204ENST00000401884 ADGRF5Q8IZF2 1346 aa21.77■■□□□ 1.08
SNED1-204ENST00000401884 NSD3Q9BZ95 1437 aa21.77■■□□□ 1.08
SNED1-204ENST00000401884 DRC7Q8IY82 874 aa21.77■■□□□ 1.08
SNED1-204ENST00000401884 DISP3Q9P2K9 1392 aa21.76■■□□□ 1.07
SNED1-204ENST00000401884 KIAA2012Q0VF49 1180 aa21.76■■□□□ 1.07
SNED1-204ENST00000401884 MVPQ14764 893 aaKnown RBP21.76■■□□□ 1.07
SNED1-204ENST00000401884 DUSP27Q5VZP5 1158 aa21.76■■□□□ 1.07
SNED1-204ENST00000401884 CT47B1P0C2W7 299 aaPredicted RBP21.76■■□□□ 1.07
SNED1-204ENST00000401884 FOXD4L6Q3SYB3 417 aaPredicted RBP21.76■■□□□ 1.07
SNED1-204ENST00000401884 FOXD4L3Q6VB84 417 aaPredicted RBP21.76■■□□□ 1.07
SNED1-204ENST00000401884 CHAF1AQ13111 956 aaPredicted RBP21.75■■□□□ 1.07
SNED1-204ENST00000401884 TWISTNBQ3B726 338 aaPredicted RBP21.75■■□□□ 1.07
SNED1-204ENST00000401884 NINLQ9Y2I6 1382 aa21.74■■□□□ 1.07
SNED1-204ENST00000401884 NRDCO43847 1150 aa21.74■■□□□ 1.07
SNED1-204ENST00000401884 TXNDC2Q86VQ3 553 aa21.74■■□□□ 1.07
SNED1-204ENST00000401884 TCOF1Q13428 1488 aaKnown RBP21.74■■□□□ 1.07
SNED1-204ENST00000401884 GOLGA6L6A8MZA4 724 aa21.74■■□□□ 1.07
SNED1-204ENST00000401884 INTS3Q68E01 1043 aaKnown RBP21.74■■□□□ 1.07
SNED1-204ENST00000401884 C1orf115Q9H7X2 142 aa21.73■■□□□ 1.07
SNED1-204ENST00000401884 ANO2Q9NQ90 1003 aa21.72■■□□□ 1.07
SNED1-204ENST00000401884 ATP10BO94823 1461 aa21.72■■□□□ 1.07
SNED1-204ENST00000401884 C1orf141Q5JVX7 400 aa21.72■■□□□ 1.07
SNED1-204ENST00000401884 CFAP43Q8NDM7 1665 aa21.71■■□□□ 1.07
SNED1-204ENST00000401884 CDC45O75419 566 aa21.71■■□□□ 1.07
SNED1-204ENST00000401884 TMPOP42166 694 aaKnown RBP21.71■■□□□ 1.07
SNED1-204ENST00000401884 GORABQ5T7V8 394 aa21.71■■□□□ 1.07
SNED1-204ENST00000401884 C9orf78Q9NZ63 289 aaPredicted RBP21.7■■□□□ 1.06
SNED1-204ENST00000401884 NLRP6P59044 892 aa21.7■■□□□ 1.06
SNED1-204ENST00000401884 RARSP54136 660 aaKnown RBP21.69■■□□□ 1.06
SNED1-204ENST00000401884 HTATSF1O43719 755 aaKnown RBP21.68■■□□□ 1.06
SNED1-204ENST00000401884 RALGAPBQ86X10 1494 aa21.68■■□□□ 1.06
SNED1-204ENST00000401884 ATAD2Q6PL18 1390 aa21.68■■□□□ 1.06
SNED1-204ENST00000401884 SULT6B1Q6IMI4 303 aa21.68■■□□□ 1.06
SNED1-204ENST00000401884 DIAPH3Q9NSV4 1193 aa21.68■■□□□ 1.06
SNED1-204ENST00000401884 CTTNBP2Q8WZ74 1663 aa21.68■■□□□ 1.06
SNED1-204ENST00000401884 RAPGEF6Q8TEU7 1601 aa21.67■■□□□ 1.06
SNED1-204ENST00000401884 NUTM2GQ5VZR2 741 aa21.67■■□□□ 1.06
SNED1-204ENST00000401884 GCC1Q96CN9 775 aa21.67■■□□□ 1.06
SNED1-204ENST00000401884 CSPP1Q1MSJ5 1256 aa21.67■■□□□ 1.06
SNED1-204ENST00000401884 NPHP1O15259 732 aa21.66■■□□□ 1.06
SNED1-204ENST00000401884 FCHSD2O94868 740 aa21.66■■□□□ 1.06
SNED1-204ENST00000401884 NUCB2P80303 420 aa21.66■■□□□ 1.06
SNED1-204ENST00000401884 PHF14O94880 888 aa21.66■■□□□ 1.06
SNED1-204ENST00000401884 SCAF11Q99590 1463 aaKnown RBP21.66■■□□□ 1.06
SNED1-204ENST00000401884 HSP90B1P14625 803 aaKnown RBP21.65■■□□□ 1.06
SNED1-204ENST00000401884 PSME1Q06323 249 aa21.65■■□□□ 1.06
SNED1-204ENST00000401884 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.05
SNED1-204ENST00000401884 GNL2Q13823 731 aaKnown RBP21.64■■□□□ 1.05
SNED1-204ENST00000401884 AMER1Q5JTC6 1135 aaPredicted RBP21.64■■□□□ 1.05
SNED1-204ENST00000401884 TRAK2O60296 914 aa21.64■■□□□ 1.05
SNED1-204ENST00000401884 TAF7LQ5H9L4 462 aa21.64■■□□□ 1.05
SNED1-204ENST00000401884 TESK2Q96S53 571 aa21.63■■□□□ 1.05
SNED1-204ENST00000401884 BRPF3Q9ULD4 1205 aa21.63■■□□□ 1.05
SNED1-204ENST00000401884 RUFY2Q8WXA3 655 aa21.63■■□□□ 1.05
SNED1-204ENST00000401884 SSH1Q8WYL5 1049 aa21.62■■□□□ 1.05
SNED1-204ENST00000401884 ZNF692Q9BU19 519 aaPredicted RBP21.62■■□□□ 1.05
SNED1-204ENST00000401884 ATP6V1DQ9Y5K8 247 aa21.62■■□□□ 1.05
SNED1-204ENST00000401884 NEXNQ0ZGT2 675 aa21.62■■□□□ 1.05
SNED1-204ENST00000401884 TMEM57Q8N5G2 664 aa21.62■■□□□ 1.05
SNED1-204ENST00000401884 LRPPRCP42704 1394 aaKnown RBP21.61■■□□□ 1.05
SNED1-204ENST00000401884 ADGRL1O94910 1474 aa21.61■■□□□ 1.05
SNED1-204ENST00000401884 RTEL1-TNFRSF6BF6WH68 1400 aa21.61■■□□□ 1.05
SNED1-204ENST00000401884 PRAG1Q86YV5 1406 aa21.61■■□□□ 1.05
SNED1-204ENST00000401884 PARD3Q8TEW0 1356 aa21.61■■□□□ 1.05
SNED1-204ENST00000401884 IDI1Q13907 227 aa21.61■■□□□ 1.05
SNED1-204ENST00000401884 RRS1Q15050 365 aaKnown RBP21.6■■□□□ 1.05
SNED1-204ENST00000401884 ZNF428Q96B54 188 aa21.6■■□□□ 1.05
SNED1-204ENST00000401884 THUMPD2Q9BTF0 503 aaKnown RBP21.6■■□□□ 1.05
SNED1-204ENST00000401884 CCDC9Q9Y3X0 531 aaKnown RBP21.6■■□□□ 1.05
SNED1-204ENST00000401884 SLC4A2P04920 1241 aa21.6■■□□□ 1.05
SNED1-204ENST00000401884 IFIT2P09913 472 aaKnown RBP21.6■■□□□ 1.05
SNED1-204ENST00000401884 RSPH6AQ9H0K4 717 aa21.6■■□□□ 1.05
SNED1-204ENST00000401884 UBTFL1P0CB47 393 aaPredicted RBP21.6■■□□□ 1.05
SNED1-204ENST00000401884 ZKSCAN1P17029 563 aaPredicted RBP21.6■■□□□ 1.05
SNED1-204ENST00000401884 CHD1LQ86WJ1 897 aa21.6■■□□□ 1.05
SNED1-204ENST00000401884 MCTP1Q6DN14 999 aa21.59■■□□□ 1.05
SNED1-204ENST00000401884 WDR62O43379 1518 aa21.59■■□□□ 1.05
SNED1-204ENST00000401884 GNAI3P08754 354 aa21.59■■□□□ 1.05
SNED1-204ENST00000401884 GAS2L2Q8NHY3 880 aa21.59■■□□□ 1.05
SNED1-204ENST00000401884 DHX29Q7Z478 1369 aaKnown RBP21.59■■□□□ 1.05
SNED1-204ENST00000401884 CCDC61Q9Y6R9 512 aa21.59■■□□□ 1.05
SNED1-204ENST00000401884 IL27Q8NEV9 243 aa21.58■■□□□ 1.05
SNED1-204ENST00000401884 NFE2L2Q16236 605 aa21.58■■□□□ 1.04
SNED1-204ENST00000401884 PER1O15534 1290 aaPredicted RBP21.57■■□□□ 1.04
SNED1-204ENST00000401884 WAPLQ7Z5K2 1190 aa21.57■■□□□ 1.04
SNED1-204ENST00000401884 C14orf93Q9H972 538 aaKnown RBP21.57■■□□□ 1.04
SNED1-204ENST00000401884 CD109Q6YHK3 1445 aa21.57■■□□□ 1.04
SNED1-204ENST00000401884 MRE11P49959 708 aa21.57■■□□□ 1.04
SNED1-204ENST00000401884 CCDC30Q5VVM6 783 aa21.56■■□□□ 1.04
SNED1-204ENST00000401884 DDX58O95786 925 aaKnown RBP21.56■■□□□ 1.04
SNED1-204ENST00000401884 HSP90AB4PQ58FF6 505 aa21.56■■□□□ 1.04
SNED1-204ENST00000401884 ABTB2Q8N961 1025 aa21.56■■□□□ 1.04
SNED1-204ENST00000401884 ARID3AQ99856 593 aa21.56■■□□□ 1.04
SNED1-204ENST00000401884 SURF6O75683 361 aaKnown RBP21.55■■□□□ 1.04
SNED1-204ENST00000401884 PZPP20742 1482 aa21.55■■□□□ 1.04
SNED1-204ENST00000401884 NOS1P29475 1434 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms