RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 POGKQ9P215 609 aa26.93■■□□□ 1.9
PDLIM2-205ENST00000397761 ADGRB2O60241 1585 aa26.93■■□□□ 1.9
PDLIM2-205ENST00000397761 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
PDLIM2-205ENST00000397761 ROBO2Q9HCK4 1378 aa26.92■■□□□ 1.9
PDLIM2-205ENST00000397761 EVC2Q86UK5 1308 aa26.92■■□□□ 1.9
PDLIM2-205ENST00000397761 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.91■■□□□ 1.9
PDLIM2-205ENST00000397761 NWD1Q149M9 1564 aa26.88■■□□□ 1.89
PDLIM2-205ENST00000397761 WAPLQ7Z5K2 1190 aa26.88■■□□□ 1.89
PDLIM2-205ENST00000397761 SAFB2Q14151 953 aaKnown RBP eCLIP26.87■■□□□ 1.89
PDLIM2-205ENST00000397761 NCKAP5LQ9HCH0 1330 aa26.87■■□□□ 1.89
PDLIM2-205ENST00000397761 AMOTL2Q9Y2J4 779 aa26.87■■□□□ 1.89
PDLIM2-205ENST00000397761 MINK1Q8N4C8 1332 aaPredicted RBP26.85■■□□□ 1.89
PDLIM2-205ENST00000397761 ANP32CO43423 234 aa26.84■■□□□ 1.89
PDLIM2-205ENST00000397761 PER1O15534 1290 aaPredicted RBP26.83■■□□□ 1.89
PDLIM2-205ENST00000397761 PANK3Q9H999 370 aa26.81■■□□□ 1.88
PDLIM2-205ENST00000397761 ATAD2Q6PL18 1390 aa26.8■■□□□ 1.88
PDLIM2-205ENST00000397761 NINLQ9Y2I6 1382 aa26.8■■□□□ 1.88
PDLIM2-205ENST00000397761 DMRT2Q9Y5R5 561 aa26.79■■□□□ 1.88
PDLIM2-205ENST00000397761 KCNA6P17658 529 aa26.77■■□□□ 1.88
PDLIM2-205ENST00000397761 CDK19Q9BWU1 502 aa26.77■■□□□ 1.88
PDLIM2-205ENST00000397761 PRKRIP1Q9H875 184 aaPredicted RBP26.76■■□□□ 1.87
PDLIM2-205ENST00000397761 CABP2Q9NPB3 220 aa26.76■■□□□ 1.87
PDLIM2-205ENST00000397761 NALCNQ8IZF0 1738 aa26.76■■□□□ 1.87
PDLIM2-205ENST00000397761 USP32Q8NFA0 1604 aa26.76■■□□□ 1.87
PDLIM2-205ENST00000397761 TOPAZ1Q8N9V7 1692 aa26.75■■□□□ 1.87
PDLIM2-205ENST00000397761 WASLO00401 505 aaPredicted RBP26.75■■□□□ 1.87
PDLIM2-205ENST00000397761 STRCP1A6NGW2 1772 aa26.75■■□□□ 1.87
PDLIM2-205ENST00000397761 SRPK2P78362 688 aaKnown RBP26.74■■□□□ 1.87
PDLIM2-205ENST00000397761 KTN1Q86UP2 1357 aaKnown RBP26.73■■□□□ 1.87
PDLIM2-205ENST00000397761 CCER2I3L3R5 266 aa26.73■■□□□ 1.87
PDLIM2-205ENST00000397761 NKTRP30414 1462 aaKnown RBP26.73■■□□□ 1.87
PDLIM2-205ENST00000397761 FMN2Q9NZ56 1722 aa26.71■■□□□ 1.87
PDLIM2-205ENST00000397761 SLC12A5Q9H2X9 1139 aa26.71■■□□□ 1.87
PDLIM2-205ENST00000397761 NPC1L1Q9UHC9 1359 aa26.71■■□□□ 1.87
PDLIM2-205ENST00000397761 ITSN1Q15811 1721 aa26.71■■□□□ 1.87
PDLIM2-205ENST00000397761 ATP7BP35670 1465 aa26.7■■□□□ 1.87
PDLIM2-205ENST00000397761 ANKRD36BQ8N2N9 1353 aa26.7■■□□□ 1.86
PDLIM2-205ENST00000397761 CD163L1Q9NR16 1453 aa26.7■■□□□ 1.86
PDLIM2-205ENST00000397761 CDC42BPGQ6DT37 1551 aa26.7■■□□□ 1.86
PDLIM2-205ENST00000397761 AKAP12Q02952 1782 aa26.69■■□□□ 1.86
PDLIM2-205ENST00000397761 RGPD8O14715 1765 aaPredicted RBP26.68■■□□□ 1.86
PDLIM2-205ENST00000397761 PARD3Q8TEW0 1356 aa26.67■■□□□ 1.86
PDLIM2-205ENST00000397761 CARD14Q9BXL6 1004 aa26.67■■□□□ 1.86
PDLIM2-205ENST00000397761 TMC1Q8TDI8 760 aa26.66■■□□□ 1.86
PDLIM2-205ENST00000397761 AMER1Q5JTC6 1135 aaPredicted RBP26.65■■□□□ 1.86
PDLIM2-205ENST00000397761 KNSTRNQ9Y448 316 aa26.65■■□□□ 1.86
PDLIM2-205ENST00000397761 MON2Q7Z3U7 1717 aa26.65■■□□□ 1.86
PDLIM2-205ENST00000397761 ADGRL3Q9HAR2 1447 aa26.64■■□□□ 1.86
PDLIM2-205ENST00000397761 ILDR1Q86SU0 546 aaPredicted RBP26.64■■□□□ 1.86
PDLIM2-205ENST00000397761 RALBP1Q15311 655 aa26.63■■□□□ 1.85
PDLIM2-205ENST00000397761 PRR36Q9H6K5 1346 aa26.63■■□□□ 1.85
PDLIM2-205ENST00000397761 A0A1W2PP64 1363 aa26.62■■□□□ 1.85
PDLIM2-205ENST00000397761 NUDT16Q96DE0 195 aaKnown RBP26.62■■□□□ 1.85
PDLIM2-205ENST00000397761 PPIP5K1Q6PFW1 1433 aa26.61■■□□□ 1.85
PDLIM2-205ENST00000397761 NSD3Q9BZ95 1437 aa26.61■■□□□ 1.85
PDLIM2-205ENST00000397761 ANKRD26Q9UPS8 1709 aa26.61■■□□□ 1.85
PDLIM2-205ENST00000397761 ANKARQ7Z5J8 1434 aa26.61■■□□□ 1.85
PDLIM2-205ENST00000397761 CPSF1Q10570 1443 aaKnown RBP26.6■■□□□ 1.85
PDLIM2-205ENST00000397761 CCDC61Q9Y6R9 512 aa26.6■■□□□ 1.85
PDLIM2-205ENST00000397761 XIRP1Q702N8 1843 aaKnown RBP26.59■■□□□ 1.85
PDLIM2-205ENST00000397761 KIF20BQ96Q89 1820 aa26.59■■□□□ 1.85
PDLIM2-205ENST00000397761 TERF2IPQ9NYB0 399 aa26.59■■□□□ 1.85
PDLIM2-205ENST00000397761 CABP1Q9NZU7 370 aa26.58■■□□□ 1.85
PDLIM2-205ENST00000397761 LTBP4Q8N2S1 1624 aa26.58■■□□□ 1.85
PDLIM2-205ENST00000397761 NCOA3Q9Y6Q9 1424 aa26.57■■□□□ 1.84
PDLIM2-205ENST00000397761 CERKQ8TCT0 537 aa26.56■■□□□ 1.84
PDLIM2-205ENST00000397761 FBXO41Q8TF61 875 aa26.56■■□□□ 1.84
PDLIM2-205ENST00000397761 NRKQ7Z2Y5 1582 aa26.53■■□□□ 1.84
PDLIM2-205ENST00000397761 MYBBP1AQ9BQG0 1328 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-205ENST00000397761 PLEKHG3A1L390 1219 aa26.53■■□□□ 1.84
PDLIM2-205ENST00000397761 CC2D1BQ5T0F9 858 aaKnown RBP26.53■■□□□ 1.84
PDLIM2-205ENST00000397761 NSD2O96028 1365 aa26.52■■□□□ 1.84
PDLIM2-205ENST00000397761 HDGFL2Q7Z4V5 671 aaPredicted RBP26.52■■□□□ 1.84
PDLIM2-205ENST00000397761 PROSER2Q86WR7 435 aaPredicted RBP26.51■■□□□ 1.83
PDLIM2-205ENST00000397761 CGNL1Q0VF96 1302 aa26.51■■□□□ 1.83
PDLIM2-205ENST00000397761 EDC4Q6P2E9 1401 aaKnown RBP26.49■■□□□ 1.83
PDLIM2-205ENST00000397761 BRD4O60885 1362 aaPredicted RBP26.47■■□□□ 1.83
PDLIM2-205ENST00000397761 DCCP43146 1447 aa26.47■■□□□ 1.83
PDLIM2-205ENST00000397761 CCDC184Q52MB2 194 aa26.47■■□□□ 1.83
PDLIM2-205ENST00000397761 ZNF335Q9H4Z2 1342 aaPredicted RBP26.47■■□□□ 1.83
PDLIM2-205ENST00000397761 POLR3AO14802 1390 aaPredicted RBP26.47■■□□□ 1.83
PDLIM2-205ENST00000397761 TMEM94Q12767 1356 aa26.47■■□□□ 1.83
PDLIM2-205ENST00000397761 CNGB1Q14028 1251 aaPredicted RBP26.46■■□□□ 1.83
PDLIM2-205ENST00000397761 RBM33Q96EV2 1170 aaKnown RBP26.46■■□□□ 1.83
PDLIM2-205ENST00000397761 IQSEC2Q5JU85 1478 aa26.45■■□□□ 1.82
PDLIM2-205ENST00000397761 NLRP13Q86W25 1043 aa26.45■■□□□ 1.82
PDLIM2-205ENST00000397761 ZNF692Q9BU19 519 aaPredicted RBP26.45■■□□□ 1.82
PDLIM2-205ENST00000397761 LRRC7Q96NW7 1537 aa26.44■■□□□ 1.82
PDLIM2-205ENST00000397761 C19orf44Q9H6X5 657 aa26.43■■□□□ 1.82
PDLIM2-205ENST00000397761 ACEP12821 1306 aa26.42■■□□□ 1.82
PDLIM2-205ENST00000397761 NUTM2FA1L443 756 aa26.42■■□□□ 1.82
PDLIM2-205ENST00000397761 MRS2Q9HD23 443 aa26.42■■□□□ 1.82
PDLIM2-205ENST00000397761 USP6P35125 1406 aa26.41■■□□□ 1.82
PDLIM2-205ENST00000397761 SSH2Q76I76 1423 aa26.41■■□□□ 1.82
PDLIM2-205ENST00000397761 PPP2R1AP30153 589 aa26.4■■□□□ 1.82
PDLIM2-205ENST00000397761 KIF1AQ12756 1690 aa26.39■■□□□ 1.82
PDLIM2-205ENST00000397761 FYB1O15117 783 aa26.39■■□□□ 1.82
PDLIM2-205ENST00000397761 C14orf37Q86TY3 774 aa26.39■■□□□ 1.82
PDLIM2-205ENST00000397761 USP54Q70EL1 1684 aa26.37■■□□□ 1.81
PDLIM2-205ENST00000397761 MST1RQ04912 1400 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms