RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 IL27Q8NEV9 243 aa23.72■■□□□ 1.39
IFFO1-204ENST00000396840 IFT172Q9UG01 1749 aa23.72■■□□□ 1.39
IFFO1-204ENST00000396840 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
IFFO1-204ENST00000396840 C14orf93Q9H972 538 aaKnown RBP23.71■■□□□ 1.39
IFFO1-204ENST00000396840 CGNL1Q0VF96 1302 aa23.71■■□□□ 1.39
IFFO1-204ENST00000396840 RTN4Q9NQC3 1192 aaKnown RBP23.7■■□□□ 1.39
IFFO1-204ENST00000396840 NPATQ14207 1427 aa23.7■■□□□ 1.38
IFFO1-204ENST00000396840 PDE3AQ14432 1141 aa23.69■■□□□ 1.38
IFFO1-204ENST00000396840 NRXN1Q9ULB1 1477 aa23.68■■□□□ 1.38
IFFO1-204ENST00000396840 SBNO2Q9Y2G9 1366 aa23.68■■□□□ 1.38
IFFO1-204ENST00000396840 SEC24BO95487 1268 aa23.68■■□□□ 1.38
IFFO1-204ENST00000396840 RLBP1P12271 317 aa23.68■■□□□ 1.38
IFFO1-204ENST00000396840 RARSP54136 660 aaKnown RBP23.67■■□□□ 1.38
IFFO1-204ENST00000396840 CABP2Q9NPB3 220 aa23.67■■□□□ 1.38
IFFO1-204ENST00000396840 NEURL4Q96JN8 1562 aa23.67■■□□□ 1.38
IFFO1-204ENST00000396840 ADGRB3O60242 1522 aa23.67■■□□□ 1.38
IFFO1-204ENST00000396840 U2AF1L5P0DN76 240 aaPredicted RBP23.67■■□□□ 1.38
IFFO1-204ENST00000396840 U2AF1Q01081 240 aaKnown RBP eCLIP23.67■■□□□ 1.381e-7■□□□□ 8.3
IFFO1-204ENST00000396840 QRICH2Q9H0J4 1663 aa23.66■■□□□ 1.38
IFFO1-204ENST00000396840 ZNF518AQ6AHZ1 1483 aa23.66■■□□□ 1.38
IFFO1-204ENST00000396840 STK26Q9P289 416 aa23.66■■□□□ 1.38
IFFO1-204ENST00000396840 NPM1P06748 294 aaKnown RBP eCLIP23.65■■□□□ 1.38
IFFO1-204ENST00000396840 NGEFQ8N5V2 710 aa23.65■■□□□ 1.38
IFFO1-204ENST00000396840 SHPRHQ149N8 1683 aa23.65■■□□□ 1.38
IFFO1-204ENST00000396840 MYO3AQ8NEV4 1616 aa23.64■■□□□ 1.38
IFFO1-204ENST00000396840 CFAP53Q96M91 514 aa23.64■■□□□ 1.37
IFFO1-204ENST00000396840 PCDHB15Q9Y5E8 787 aa23.63■■□□□ 1.37
IFFO1-204ENST00000396840 RAPGEF3O95398 923 aa23.62■■□□□ 1.37
IFFO1-204ENST00000396840 FRAT2O75474 233 aaPredicted RBP23.61■■□□□ 1.37
IFFO1-204ENST00000396840 ADGRB1O14514 1584 aa23.6■■□□□ 1.37
IFFO1-204ENST00000396840 TSR2Q969E8 191 aaKnown RBP23.6■■□□□ 1.37
IFFO1-204ENST00000396840 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
IFFO1-204ENST00000396840 U2SURPO15042 1029 aaKnown RBP23.59■■□□□ 1.37
IFFO1-204ENST00000396840 PRKCSHP14314 528 aaPredicted RBP23.59■■□□□ 1.37
IFFO1-204ENST00000396840 GSE1Q14687 1217 aa23.59■■□□□ 1.37
IFFO1-204ENST00000396840 PPLO60437 1756 aa23.59■■□□□ 1.37
IFFO1-204ENST00000396840 EVC2Q86UK5 1308 aa23.59■■□□□ 1.37
IFFO1-204ENST00000396840 USP19O94966 1318 aa23.58■■□□□ 1.37
IFFO1-204ENST00000396840 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.37
IFFO1-204ENST00000396840 CD109Q6YHK3 1445 aa23.58■■□□□ 1.37
IFFO1-204ENST00000396840 GGNBP2Q9H3C7 697 aa23.57■■□□□ 1.36
IFFO1-204ENST00000396840 SRPK2P78362 688 aaKnown RBP23.56■■□□□ 1.36
IFFO1-204ENST00000396840 WDR63Q8IWG1 891 aa23.56■■□□□ 1.36
IFFO1-204ENST00000396840 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
IFFO1-204ENST00000396840 MAPK8IP3Q9UPT6 1336 aa23.56■■□□□ 1.36
IFFO1-204ENST00000396840 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
IFFO1-204ENST00000396840 FRMPD1Q5SYB0 1578 aa23.56■■□□□ 1.36
IFFO1-204ENST00000396840 PHF23Q9BUL5 403 aaPredicted RBP23.55■■□□□ 1.36
IFFO1-204ENST00000396840 NINLQ9Y2I6 1382 aa23.55■■□□□ 1.36
IFFO1-204ENST00000396840 POGZQ7Z3K3 1410 aa23.54■■□□□ 1.36
IFFO1-204ENST00000396840 PDZRN3Q9UPQ7 1066 aa23.54■■□□□ 1.36
IFFO1-204ENST00000396840 VGFO15240 615 aaPredicted RBP23.53■■□□□ 1.36
IFFO1-204ENST00000396840 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
IFFO1-204ENST00000396840 BRPF3Q9ULD4 1205 aa23.53■■□□□ 1.36
IFFO1-204ENST00000396840 PMFBP1Q8TBY8 1022 aa23.53■■□□□ 1.36
IFFO1-204ENST00000396840 MYH16Q9H6N6 1097 aa23.53■■□□□ 1.36
IFFO1-204ENST00000396840 GLI2P10070 1586 aa23.52■■□□□ 1.36
IFFO1-204ENST00000396840 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
IFFO1-204ENST00000396840 ANKRD36BQ8N2N9 1353 aa23.51■■□□□ 1.35
IFFO1-204ENST00000396840 IDI1Q13907 227 aa23.51■■□□□ 1.35
IFFO1-204ENST00000396840 FTSJ3Q8IY81 847 aaKnown RBP23.51■■□□□ 1.35
IFFO1-204ENST00000396840 TULP4Q9NRJ4 1543 aa23.51■■□□□ 1.35
IFFO1-204ENST00000396840 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
IFFO1-204ENST00000396840 ABCC3O15438 1527 aa23.5■■□□□ 1.35
IFFO1-204ENST00000396840 EXOSC9Q06265 439 aaKnown RBP23.48■■□□□ 1.35
IFFO1-204ENST00000396840 SMC4Q9NTJ3 1288 aa23.48■■□□□ 1.35
IFFO1-204ENST00000396840 A0A1W2PP64 1363 aa23.48■■□□□ 1.35
IFFO1-204ENST00000396840 SIGLEC1Q9BZZ2 1709 aa23.48■■□□□ 1.35
IFFO1-204ENST00000396840 CCDC27Q2M243 656 aa23.47■■□□□ 1.35
IFFO1-204ENST00000396840 ANO8Q9HCE9 1232 aaPredicted RBP23.46■■□□□ 1.35
IFFO1-204ENST00000396840 HECW2Q9P2P5 1572 aa23.46■■□□□ 1.35
IFFO1-204ENST00000396840 MVPQ14764 893 aaKnown RBP23.46■■□□□ 1.35
IFFO1-204ENST00000396840 ZKSCAN2Q63HK3 967 aa23.46■■□□□ 1.35
IFFO1-204ENST00000396840 RWDD1Q9H446 243 aaPredicted RBP23.46■■□□□ 1.35
IFFO1-204ENST00000396840 MLH3Q9UHC1 1453 aa23.46■■□□□ 1.35
IFFO1-204ENST00000396840 VIRMAQ69YN4 1812 aaKnown RBP23.45■■□□□ 1.34
IFFO1-204ENST00000396840 DZIP1LQ8IYY4 767 aaKnown RBP23.45■■□□□ 1.34
IFFO1-204ENST00000396840 ARHGEF28Q8N1W1 1705 aaKnown RBP23.44■■□□□ 1.34
IFFO1-204ENST00000396840 SPRYD3Q8NCJ5 442 aa23.44■■□□□ 1.34
IFFO1-204ENST00000396840 PRAM1Q96QH2 718 aa23.44■■□□□ 1.34
IFFO1-204ENST00000396840 TMPOP42166 694 aaKnown RBP23.43■■□□□ 1.34
IFFO1-204ENST00000396840 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
IFFO1-204ENST00000396840 POGKQ9P215 609 aa23.43■■□□□ 1.34
IFFO1-204ENST00000396840 CAMSAP1Q5T5Y3 1602 aa23.43■■□□□ 1.34
IFFO1-204ENST00000396840 FBLN1P23142 703 aa23.43■■□□□ 1.34
IFFO1-204ENST00000396840 UPF2Q9HAU5 1272 aaKnown RBP23.43■■□□□ 1.34
IFFO1-204ENST00000396840 BECN1Q14457 450 aa23.42■■□□□ 1.34
IFFO1-204ENST00000396840 SSH1Q8WYL5 1049 aa23.42■■□□□ 1.34
IFFO1-204ENST00000396840 NEXMIFQ5QGS0 1516 aa23.42■■□□□ 1.34
IFFO1-204ENST00000396840 TRIM27P14373 513 aa23.41■■□□□ 1.34
IFFO1-204ENST00000396840 TRIM35Q9UPQ4 493 aa23.41■■□□□ 1.34
IFFO1-204ENST00000396840 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
IFFO1-204ENST00000396840 FYB1O15117 783 aa23.4■■□□□ 1.34
IFFO1-204ENST00000396840 PLEKHF1Q96S99 279 aa23.4■■□□□ 1.34
IFFO1-204ENST00000396840 NLRP1Q9C000 1473 aa23.39■■□□□ 1.34
IFFO1-204ENST00000396840 NSD2O96028 1365 aa23.39■■□□□ 1.34
IFFO1-204ENST00000396840 RIPK4P57078 832 aa23.39■■□□□ 1.34
IFFO1-204ENST00000396840 NOB1Q9ULX3 412 aaKnown RBP23.38■■□□□ 1.33
IFFO1-204ENST00000396840 ABCC11Q96J66 1382 aa23.37■■□□□ 1.33
IFFO1-204ENST00000396840 FBXO31Q5XUX0 539 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms