RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 FOXD1Q16676 465 aa26.27■■□□□ 1.8
EXOSC3-202ENST00000396521 LRPPRCP42704 1394 aaKnown RBP26.25■■□□□ 1.79
EXOSC3-202ENST00000396521 ESCO1Q5FWF5 840 aa26.25■■□□□ 1.79
EXOSC3-202ENST00000396521 ATAD2Q6PL18 1390 aa26.24■■□□□ 1.79
EXOSC3-202ENST00000396521 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
EXOSC3-202ENST00000396521 ACIN1Q9UKV3 1341 aaKnown RBP26.21■■□□□ 1.79
EXOSC3-202ENST00000396521 CCDC144AA2RUR9 1427 aa26.2■■□□□ 1.78
EXOSC3-202ENST00000396521 CDC42BPGQ6DT37 1551 aa26.19■■□□□ 1.78
EXOSC3-202ENST00000396521 TECPR2O15040 1411 aa26.18■■□□□ 1.78
EXOSC3-202ENST00000396521 ABCC11Q96J66 1382 aa26.18■■□□□ 1.78
EXOSC3-202ENST00000396521 FOXO3O43524 673 aa26.17■■□□□ 1.78
EXOSC3-202ENST00000396521 CCDC125Q86Z20 511 aa26.17■■□□□ 1.78
EXOSC3-202ENST00000396521 ATRNO75882 1429 aa26.16■■□□□ 1.78
EXOSC3-202ENST00000396521 MYOM2P54296 1465 aa26.16■■□□□ 1.78
EXOSC3-202ENST00000396521 ADGRF5Q8IZF2 1346 aa26.15■■□□□ 1.78
EXOSC3-202ENST00000396521 PPLO60437 1756 aa26.15■■□□□ 1.78
EXOSC3-202ENST00000396521 COL22A1Q8NFW1 1626 aaPredicted RBP26.15■■□□□ 1.78
EXOSC3-202ENST00000396521 SIRT1Q96EB6 747 aa26.14■■□□□ 1.78
EXOSC3-202ENST00000396521 RGL3Q3MIN7 710 aa26.13■■□□□ 1.77
EXOSC3-202ENST00000396521 STK26Q9P289 416 aa26.13■■□□□ 1.77
EXOSC3-202ENST00000396521 SPATA31E1Q6ZUB1 1445 aa26.13■■□□□ 1.77
EXOSC3-202ENST00000396521 PXDNQ92626 1479 aa26.12■■□□□ 1.77
EXOSC3-202ENST00000396521 WAPLQ7Z5K2 1190 aa26.11■■□□□ 1.77
EXOSC3-202ENST00000396521 MPHOSPH9Q99550 1183 aa26.11■■□□□ 1.77
EXOSC3-202ENST00000396521 GJD4Q96KN9 370 aaPredicted RBP26.09■■□□□ 1.77
EXOSC3-202ENST00000396521 BCL9LQ86UU0 1499 aa26.09■■□□□ 1.77
EXOSC3-202ENST00000396521 ZRANB1Q9UGI0 708 aa26.06■■□□□ 1.76
EXOSC3-202ENST00000396521 SPATA31A3Q5VYP0 1347 aa26.06■■□□□ 1.76
EXOSC3-202ENST00000396521 PIK3C2GO75747 1445 aa26.05■■□□□ 1.76
EXOSC3-202ENST00000396521 XPCQ01831 940 aaPredicted RBP26.05■■□□□ 1.76
EXOSC3-202ENST00000396521 TMEM132EQ6IEE7 984 aa26.05■■□□□ 1.76
EXOSC3-202ENST00000396521 SRCAPQ6ZRS2 3230 aa26.05■■□□□ 1.76
EXOSC3-202ENST00000396521 UNC5CLQ8IV45 518 aa26.04■■□□□ 1.76
EXOSC3-202ENST00000396521 YTHDC2Q9H6S0 1430 aaKnown RBP26.04■■□□□ 1.76
EXOSC3-202ENST00000396521 NUTM2FA1L443 756 aa26.03■■□□□ 1.76
EXOSC3-202ENST00000396521 PSME1Q06323 249 aa26.03■■□□□ 1.76
EXOSC3-202ENST00000396521 C14orf93Q9H972 538 aaKnown RBP26.03■■□□□ 1.76
EXOSC3-202ENST00000396521 KRT28Q7Z3Y7 464 aa26.02■■□□□ 1.76
EXOSC3-202ENST00000396521 DHX57Q6P158 1386 aaKnown RBP26■■□□□ 1.75
EXOSC3-202ENST00000396521 PLEKHH1Q9ULM0 1364 aa25.99■■□□□ 1.75
EXOSC3-202ENST00000396521 KNDC1Q76NI1 1749 aa25.97■■□□□ 1.75
EXOSC3-202ENST00000396521 PHF8Q9UPP1 1060 aa25.97■■□□□ 1.75
EXOSC3-202ENST00000396521 SLIT2O94813 1529 aa25.97■■□□□ 1.75
EXOSC3-202ENST00000396521 KIF1AQ12756 1690 aa25.96■■□□□ 1.75
EXOSC3-202ENST00000396521 HAP1P54257 671 aaPredicted RBP25.96■■□□□ 1.75
EXOSC3-202ENST00000396521 EP400Q96L91 3159 aa25.95■■□□□ 1.75
EXOSC3-202ENST00000396521 MARF1Q9Y4F3 1742 aaKnown RBP25.94■■□□□ 1.74
EXOSC3-202ENST00000396521 SBNO1A3KN83 1393 aa25.94■■□□□ 1.74
EXOSC3-202ENST00000396521 IFT172Q9UG01 1749 aa25.93■■□□□ 1.74
EXOSC3-202ENST00000396521 ARHGEF10O15013 1369 aa25.93■■□□□ 1.74
EXOSC3-202ENST00000396521 FMN2Q9NZ56 1722 aa25.92■■□□□ 1.74
EXOSC3-202ENST00000396521 TNS3Q68CZ2 1445 aa25.92■■□□□ 1.74
EXOSC3-202ENST00000396521 VPS72Q15906 364 aa25.92■■□□□ 1.74
EXOSC3-202ENST00000396521 RALGAPBQ86X10 1494 aa25.91■■□□□ 1.74
EXOSC3-202ENST00000396521 NRXN1Q9ULB1 1477 aa25.91■■□□□ 1.74
EXOSC3-202ENST00000396521 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.91■■□□□ 1.74
EXOSC3-202ENST00000396521 BLMP54132 1417 aaPredicted RBP25.91■■□□□ 1.74
EXOSC3-202ENST00000396521 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
EXOSC3-202ENST00000396521 ONECUT3O60422 494 aaPredicted RBP25.89■■□□□ 1.74
EXOSC3-202ENST00000396521 PRAM1Q96QH2 718 aa25.89■■□□□ 1.74
EXOSC3-202ENST00000396521 SF3B2Q13435 895 aaKnown RBP25.88■■□□□ 1.73
EXOSC3-202ENST00000396521 POGKQ9P215 609 aa25.88■■□□□ 1.73
EXOSC3-202ENST00000396521 ANKARQ7Z5J8 1434 aa25.87■■□□□ 1.73
EXOSC3-202ENST00000396521 USP32Q8NFA0 1604 aa25.86■■□□□ 1.73
EXOSC3-202ENST00000396521 SEPT12Q8IYM1 358 aa25.86■■□□□ 1.73
EXOSC3-202ENST00000396521 STAC3Q96MF2 364 aa25.85■■□□□ 1.73
EXOSC3-202ENST00000396521 EIF3AQ14152 1382 aaKnown RBP25.84■■□□□ 1.73
EXOSC3-202ENST00000396521 LMOD2Q6P5Q4 547 aa25.84■■□□□ 1.73
EXOSC3-202ENST00000396521 GLI3P10071 1580 aa25.83■■□□□ 1.73
EXOSC3-202ENST00000396521 DLC1Q96QB1 1528 aa25.83■■□□□ 1.72
EXOSC3-202ENST00000396521 CABLES1Q8TDN4 633 aa25.82■■□□□ 1.72
EXOSC3-202ENST00000396521 CCDC9Q9Y3X0 531 aaKnown RBP25.82■■□□□ 1.72
EXOSC3-202ENST00000396521 SAFB2Q14151 953 aaKnown RBP eCLIP25.81■■□□□ 1.72
EXOSC3-202ENST00000396521 KRT27Q7Z3Y8 459 aa25.8■■□□□ 1.72
EXOSC3-202ENST00000396521 GPRASP1Q5JY77 1395 aa25.8■■□□□ 1.72
EXOSC3-202ENST00000396521 FAM83GA6ND36 823 aa25.77■■□□□ 1.72
EXOSC3-202ENST00000396521 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
EXOSC3-202ENST00000396521 NWD2Q9ULI1 1742 aa25.76■■□□□ 1.71
EXOSC3-202ENST00000396521 ADGRB2O60241 1585 aa25.73■■□□□ 1.71
EXOSC3-202ENST00000396521 DEFB132Q7Z7B7 95 aa25.72■■□□□ 1.71
EXOSC3-202ENST00000396521 TRAK1Q9UPV9 953 aa25.72■■□□□ 1.71
EXOSC3-202ENST00000396521 WASLO00401 505 aaPredicted RBP25.71■■□□□ 1.71
EXOSC3-202ENST00000396521 BAG6P46379 1132 aa25.71■■□□□ 1.71
EXOSC3-202ENST00000396521 BTG4Q9NY30 223 aa25.71■■□□□ 1.71
EXOSC3-202ENST00000396521 A0A0G2JS52 829 aa25.7■■□□□ 1.7
EXOSC3-202ENST00000396521 PLEKHG5O94827 1062 aa25.7■■□□□ 1.7
EXOSC3-202ENST00000396521 MYT1Q01538 1121 aa25.7■■□□□ 1.7
EXOSC3-202ENST00000396521 ADGRB1O14514 1584 aa25.69■■□□□ 1.7
EXOSC3-202ENST00000396521 NGDNQ8NEJ9 315 aaKnown RBP25.69■■□□□ 1.7
EXOSC3-202ENST00000396521 RGPD8O14715 1765 aaPredicted RBP25.69■■□□□ 1.7
EXOSC3-202ENST00000396521 RAB3GAP2Q9H2M9 1393 aa25.69■■□□□ 1.7
EXOSC3-202ENST00000396521 HIRIP3Q9BW71 556 aaPredicted RBP25.68■■□□□ 1.7
EXOSC3-202ENST00000396521 MINK1Q8N4C8 1332 aaPredicted RBP25.67■■□□□ 1.7
EXOSC3-202ENST00000396521 FAM98CQ17RN3 349 aaKnown RBP25.67■■□□□ 1.7
EXOSC3-202ENST00000396521 DCAF11Q8TEB1 546 aa25.67■■□□□ 1.7
EXOSC3-202ENST00000396521 PLCH1Q4KWH8 1693 aa25.67■■□□□ 1.7
EXOSC3-202ENST00000396521 HRCP23327 699 aa25.66■■□□□ 1.7
EXOSC3-202ENST00000396521 TULP4Q9NRJ4 1543 aa25.66■■□□□ 1.7
EXOSC3-202ENST00000396521 KDM2AQ9Y2K7 1162 aa25.65■■□□□ 1.7
EXOSC3-202ENST00000396521 PRR36Q9H6K5 1346 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms