RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 NALCNQ8IZF0 1738 aa27.36■■□□□ 1.97
HOXA9-202ENST00000396345 ATF3P18847 181 aa27.34■■□□□ 1.97
HOXA9-202ENST00000396345 ARHGEF28Q8N1W1 1705 aaKnown RBP27.33■■□□□ 1.97
HOXA9-202ENST00000396345 SAFB2Q14151 953 aaKnown RBP eCLIP27.33■■□□□ 1.97
HOXA9-202ENST00000396345 GPRASP1Q5JY77 1395 aa27.33■■□□□ 1.97
HOXA9-202ENST00000396345 CADPS2Q86UW7 1296 aa27.32■■□□□ 1.96
HOXA9-202ENST00000396345 DCCP43146 1447 aa27.31■■□□□ 1.96
HOXA9-202ENST00000396345 CARD11Q9BXL7 1154 aa27.3■■□□□ 1.96
HOXA9-202ENST00000396345 PIP4K2BP78356 416 aa27.28■■□□□ 1.96
HOXA9-202ENST00000396345 SCAF1Q9H7N4 1312 aaKnown RBP27.26■■□□□ 1.95
HOXA9-202ENST00000396345 SLAIN2Q9P270 581 aa27.26■■□□□ 1.95
HOXA9-202ENST00000396345 CDC42BPGQ6DT37 1551 aa27.24■■□□□ 1.95
HOXA9-202ENST00000396345 MINK1Q8N4C8 1332 aaPredicted RBP27.23■■□□□ 1.95
HOXA9-202ENST00000396345 CENPJQ9HC77 1338 aaPredicted RBP27.23■■□□□ 1.95
HOXA9-202ENST00000396345 EIF3AQ14152 1382 aaKnown RBP27.22■■□□□ 1.95
HOXA9-202ENST00000396345 DISP3Q9P2K9 1392 aa27.22■■□□□ 1.95
HOXA9-202ENST00000396345 HIRIP3Q9BW71 556 aaPredicted RBP27.21■■□□□ 1.95
HOXA9-202ENST00000396345 MST1RQ04912 1400 aa27.2■■□□□ 1.94
HOXA9-202ENST00000396345 ADGRB2O60241 1585 aa27.19■■□□□ 1.94
HOXA9-202ENST00000396345 QRICH2Q9H0J4 1663 aa27.17■■□□□ 1.94
HOXA9-202ENST00000396345 FMN2Q9NZ56 1722 aa27.16■■□□□ 1.94
HOXA9-202ENST00000396345 C1orf167Q5SNV9 1468 aa27.15■■□□□ 1.94
HOXA9-202ENST00000396345 ROBO1Q9Y6N7 1651 aa27.14■■□□□ 1.94
HOXA9-202ENST00000396345 NUTM2FA1L443 756 aa27.14■■□□□ 1.94
HOXA9-202ENST00000396345 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
HOXA9-202ENST00000396345 USP47Q96K76 1375 aa27.1■■□□□ 1.93
HOXA9-202ENST00000396345 BRINP3Q76B58 766 aa27.1■■□□□ 1.93
HOXA9-202ENST00000396345 CDK19Q9BWU1 502 aa27.09■■□□□ 1.93
HOXA9-202ENST00000396345 ORAI2Q96SN7 254 aa27.08■■□□□ 1.93
HOXA9-202ENST00000396345 ST20-MTHFSA0A0A6YYL1 179 aa27.07■■□□□ 1.92
HOXA9-202ENST00000396345 ESCO1Q5FWF5 840 aa27.07■■□□□ 1.92
HOXA9-202ENST00000396345 ANKARQ7Z5J8 1434 aa27.06■■□□□ 1.92
HOXA9-202ENST00000396345 TULP4Q9NRJ4 1543 aa27.06■■□□□ 1.92
HOXA9-202ENST00000396345 RGPD8O14715 1765 aaPredicted RBP27.05■■□□□ 1.92
HOXA9-202ENST00000396345 SBNO2Q9Y2G9 1366 aa27.05■■□□□ 1.92
HOXA9-202ENST00000396345 HSPA1LP34931 641 aa27.04■■□□□ 1.92
HOXA9-202ENST00000396345 EVC2Q86UK5 1308 aa27.04■■□□□ 1.92
HOXA9-202ENST00000396345 USP32Q8NFA0 1604 aa27.04■■□□□ 1.92
HOXA9-202ENST00000396345 SRPK2P78362 688 aaKnown RBP27.03■■□□□ 1.92
HOXA9-202ENST00000396345 ILDR2Q71H61 639 aa27.03■■□□□ 1.92
HOXA9-202ENST00000396345 PRR36Q9H6K5 1346 aa27.02■■□□□ 1.92
HOXA9-202ENST00000396345 NUDT16Q96DE0 195 aaKnown RBP27.01■■□□□ 1.91
HOXA9-202ENST00000396345 TESK2Q96S53 571 aa27■■□□□ 1.91
HOXA9-202ENST00000396345 CABP2Q9NPB3 220 aa27■■□□□ 1.91
HOXA9-202ENST00000396345 PHF8Q9UPP1 1060 aa26.99■■□□□ 1.91
HOXA9-202ENST00000396345 ATP7BP35670 1465 aa26.99■■□□□ 1.91
HOXA9-202ENST00000396345 AHDC1Q5TGY3 1603 aaPredicted RBP26.98■■□□□ 1.91
HOXA9-202ENST00000396345 SLC24A1O60721 1099 aa26.98■■□□□ 1.91
HOXA9-202ENST00000396345 EIF4G2P78344 907 aaKnown RBP eCLIP26.98■■□□□ 1.91
HOXA9-202ENST00000396345 PHLPP1O60346 1717 aa26.98■■□□□ 1.91
HOXA9-202ENST00000396345 NHSL1Q5SYE7 1610 aa26.98■■□□□ 1.91
HOXA9-202ENST00000396345 DDX17Q92841 729 aaKnown RBP26.97■■□□□ 1.91
HOXA9-202ENST00000396345 KIF1AQ12756 1690 aa26.97■■□□□ 1.91
HOXA9-202ENST00000396345 ITSN1Q15811 1721 aa26.96■■□□□ 1.91
HOXA9-202ENST00000396345 CCDC61Q9Y6R9 512 aa26.95■■□□□ 1.9
HOXA9-202ENST00000396345 FOXO3O43524 673 aa26.94■■□□□ 1.9
HOXA9-202ENST00000396345 HSPA5P11021 654 aaKnown RBP26.94■■□□□ 1.9
HOXA9-202ENST00000396345 PMFBP1Q8TBY8 1022 aa26.94■■□□□ 1.9
HOXA9-202ENST00000396345 NPHP3Q7Z494 1330 aa26.93■■□□□ 1.9
HOXA9-202ENST00000396345 TOPAZ1Q8N9V7 1692 aa26.92■■□□□ 1.9
HOXA9-202ENST00000396345 TMF1P82094 1093 aa26.91■■□□□ 1.9
HOXA9-202ENST00000396345 COL16A1Q07092 1604 aaPredicted RBP26.9■■□□□ 1.9
HOXA9-202ENST00000396345 PPIP5K1Q6PFW1 1433 aa26.89■■□□□ 1.89
HOXA9-202ENST00000396345 SOS2Q07890 1332 aaPredicted RBP26.89■■□□□ 1.89
HOXA9-202ENST00000396345 ATAD2Q6PL18 1390 aa26.88■■□□□ 1.89
HOXA9-202ENST00000396345 ZEB1P37275 1124 aaPredicted RBP26.88■■□□□ 1.89
HOXA9-202ENST00000396345 NGDNQ8NEJ9 315 aaKnown RBP26.88■■□□□ 1.89
HOXA9-202ENST00000396345 PUS7Q96PZ0 661 aaKnown RBP26.88■■□□□ 1.89
HOXA9-202ENST00000396345 PLEKHG3A1L390 1219 aa26.87■■□□□ 1.89
HOXA9-202ENST00000396345 XPCQ01831 940 aaPredicted RBP26.87■■□□□ 1.89
HOXA9-202ENST00000396345 SOCS7O14512 581 aa26.86■■□□□ 1.89
HOXA9-202ENST00000396345 PSME1Q06323 249 aa26.86■■□□□ 1.89
HOXA9-202ENST00000396345 KRT28Q7Z3Y7 464 aa26.86■■□□□ 1.89
HOXA9-202ENST00000396345 CABP1Q9NZU7 370 aa26.86■■□□□ 1.89
HOXA9-202ENST00000396345 PXDNQ92626 1479 aa26.86■■□□□ 1.89
HOXA9-202ENST00000396345 LRRC59Q96AG4 307 aaKnown RBP26.85■■□□□ 1.89
HOXA9-202ENST00000396345 ACEP12821 1306 aa26.84■■□□□ 1.89
HOXA9-202ENST00000396345 CDCA8Q53HL2 280 aa26.83■■□□□ 1.89
HOXA9-202ENST00000396345 POLR3AO14802 1390 aaPredicted RBP26.82■■□□□ 1.88
HOXA9-202ENST00000396345 JCADQ9P266 1359 aa26.81■■□□□ 1.88
HOXA9-202ENST00000396345 TMC1Q8TDI8 760 aa26.8■■□□□ 1.88
HOXA9-202ENST00000396345 MED1Q15648 1581 aaPredicted RBP26.8■■□□□ 1.88
HOXA9-202ENST00000396345 SBNO1A3KN83 1393 aa26.76■■□□□ 1.87
HOXA9-202ENST00000396345 SLC12A5Q9H2X9 1139 aa26.76■■□□□ 1.87
HOXA9-202ENST00000396345 SHPRHQ149N8 1683 aa26.76■■□□□ 1.87
HOXA9-202ENST00000396345 SPATA31A3Q5VYP0 1347 aa26.75■■□□□ 1.87
HOXA9-202ENST00000396345 TNS3Q68CZ2 1445 aa26.73■■□□□ 1.87
HOXA9-202ENST00000396345 TRPM3Q9HCF6 1732 aaPredicted RBP26.73■■□□□ 1.87
HOXA9-202ENST00000396345 PNPLA6Q8IY17 1366 aa26.73■■□□□ 1.87
HOXA9-202ENST00000396345 NINLQ9Y2I6 1382 aa26.73■■□□□ 1.87
HOXA9-202ENST00000396345 PAK3O75914 559 aaPredicted RBP26.73■■□□□ 1.87
HOXA9-202ENST00000396345 ZNF692Q9BU19 519 aaPredicted RBP26.73■■□□□ 1.87
HOXA9-202ENST00000396345 AKAP12Q02952 1782 aa26.71■■□□□ 1.87
HOXA9-202ENST00000396345 LMOD2Q6P5Q4 547 aa26.71■■□□□ 1.87
HOXA9-202ENST00000396345 POLR3GLQ9BT43 218 aa26.71■■□□□ 1.87
HOXA9-202ENST00000396345 CPSF1Q10570 1443 aaKnown RBP26.71■■□□□ 1.87
HOXA9-202ENST00000396345 HDGFL2Q7Z4V5 671 aaPredicted RBP26.7■■□□□ 1.86
HOXA9-202ENST00000396345 TERF2IPQ9NYB0 399 aa26.7■■□□□ 1.86
HOXA9-202ENST00000396345 USP6P35125 1406 aa26.7■■□□□ 1.86
HOXA9-202ENST00000396345 SPATA31A6Q5VVP1 1343 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms