RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 CCER2I3L3R5 266 aa10.4□□□□□ -0.74
LDHA-204ENST00000396222 C11orf95C9JLR9 678 aaPredicted RBP10.39□□□□□ -0.75
LDHA-204ENST00000396222 FER1L4A9Z1Z3 1794 aa10.39□□□□□ -0.75
LDHA-204ENST00000396222 A2ML1A8K2U0 1454 aa10.38□□□□□ -0.75
LDHA-204ENST00000396222 SBNO2Q9Y2G9 1366 aa10.38□□□□□ -0.75
LDHA-204ENST00000396222 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
LDHA-204ENST00000396222 TESK2Q96S53 571 aa10.37□□□□□ -0.75
LDHA-204ENST00000396222 KTN1Q86UP2 1357 aaKnown RBP10.37□□□□□ -0.75
LDHA-204ENST00000396222 RIMS2Q9UQ26 1411 aa10.37□□□□□ -0.75
LDHA-204ENST00000396222 CENPJQ9HC77 1338 aaPredicted RBP10.36□□□□□ -0.75
LDHA-204ENST00000396222 EID1Q9Y6B2 187 aa10.36□□□□□ -0.75
LDHA-204ENST00000396222 MYO3AQ8NEV4 1616 aa10.35□□□□□ -0.75
LDHA-204ENST00000396222 ADGRB1O14514 1584 aa10.34□□□□□ -0.75
LDHA-204ENST00000396222 THEMISQ8N1K5 641 aaPredicted RBP10.34□□□□□ -0.75
LDHA-204ENST00000396222 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
LDHA-204ENST00000396222 C3P01024 1663 aa10.34□□□□□ -0.75
LDHA-204ENST00000396222 MYO5BQ9ULV0 1848 aa10.34□□□□□ -0.75
LDHA-204ENST00000396222 TMEM2Q9UHN6 1383 aa10.34□□□□□ -0.75
LDHA-204ENST00000396222 NUTM2DQ5VT03 806 aaPredicted RBP10.34□□□□□ -0.75
LDHA-204ENST00000396222 PUS7Q96PZ0 661 aaKnown RBP10.34□□□□□ -0.75
LDHA-204ENST00000396222 TRAK1Q9UPV9 953 aa10.34□□□□□ -0.75
LDHA-204ENST00000396222 DISP3Q9P2K9 1392 aa10.32□□□□□ -0.76
LDHA-204ENST00000396222 SPOCK2Q92563 424 aa10.32□□□□□ -0.76
LDHA-204ENST00000396222 PRKRIP1Q9H875 184 aaPredicted RBP10.32□□□□□ -0.76
LDHA-204ENST00000396222 UBR1Q8IWV7 1749 aa10.32□□□□□ -0.76
LDHA-204ENST00000396222 TMEM132EQ6IEE7 984 aa10.31□□□□□ -0.76
LDHA-204ENST00000396222 ALKQ9UM73 1620 aa10.31□□□□□ -0.76
LDHA-204ENST00000396222 EVC2Q86UK5 1308 aa10.31□□□□□ -0.76
LDHA-204ENST00000396222 RALBP1Q15311 655 aa10.31□□□□□ -0.76
LDHA-204ENST00000396222 YTHDC2Q9H6S0 1430 aaKnown RBP10.3□□□□□ -0.76
LDHA-204ENST00000396222 CEBPAP49715 358 aaPredicted RBP10.3□□□□□ -0.76
LDHA-204ENST00000396222 POGKQ9P215 609 aa10.3□□□□□ -0.76
LDHA-204ENST00000396222 KNSTRNQ9Y448 316 aa10.29□□□□□ -0.76
LDHA-204ENST00000396222 PLEKHG1Q9ULL1 1385 aa10.29□□□□□ -0.76
LDHA-204ENST00000396222 SLIT1O75093 1534 aa10.29□□□□□ -0.76
LDHA-204ENST00000396222 RIMS1Q86UR5 1692 aaKnown RBP10.28□□□□□ -0.76
LDHA-204ENST00000396222 QRICH2Q9H0J4 1663 aa10.28□□□□□ -0.76
LDHA-204ENST00000396222 NINLQ9Y2I6 1382 aa10.28□□□□□ -0.76
LDHA-204ENST00000396222 DLC1Q96QB1 1528 aa10.28□□□□□ -0.76
LDHA-204ENST00000396222 ADAMTSL3P82987 1691 aa10.28□□□□□ -0.76
LDHA-204ENST00000396222 TXNDC2Q86VQ3 553 aa10.28□□□□□ -0.76
LDHA-204ENST00000396222 LRPPRCP42704 1394 aaKnown RBP10.28□□□□□ -0.76
LDHA-204ENST00000396222 ABCC11Q96J66 1382 aa10.28□□□□□ -0.76
LDHA-204ENST00000396222 ARHGEF28Q8N1W1 1705 aaKnown RBP10.27□□□□□ -0.76
LDHA-204ENST00000396222 SIRT1Q96EB6 747 aa10.27□□□□□ -0.77
LDHA-204ENST00000396222 PANK3Q9H999 370 aa10.27□□□□□ -0.77
LDHA-204ENST00000396222 STK26Q9P289 416 aa10.27□□□□□ -0.77
LDHA-204ENST00000396222 ARHGAP23Q9P227 1491 aa10.26□□□□□ -0.77
LDHA-204ENST00000396222 ATAD2Q6PL18 1390 aa10.26□□□□□ -0.77
LDHA-204ENST00000396222 CEP170BQ9Y4F5 1589 aaPredicted RBP10.26□□□□□ -0.77
LDHA-204ENST00000396222 DIP2AQ14689 1571 aa10.25□□□□□ -0.77
LDHA-204ENST00000396222 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
LDHA-204ENST00000396222 PRAM1Q96QH2 718 aa10.25□□□□□ -0.77
LDHA-204ENST00000396222 MRS2Q9HD23 443 aa10.25□□□□□ -0.77
LDHA-204ENST00000396222 ASXL1Q8IXJ9 1541 aa10.25□□□□□ -0.77
LDHA-204ENST00000396222 PTPRMP28827 1452 aa10.25□□□□□ -0.77
LDHA-204ENST00000396222 FAM135BQ49AJ0 1406 aa10.24□□□□□ -0.77
LDHA-204ENST00000396222 PER1O15534 1290 aaPredicted RBP10.24□□□□□ -0.77
LDHA-204ENST00000396222 SPINK5Q9NQ38 1064 aaPredicted RBP10.24□□□□□ -0.77
LDHA-204ENST00000396222 SETD1BQ9UPS6 1966 aaKnown RBP10.24□□□□□ -0.77
LDHA-204ENST00000396222 NPC1L1Q9UHC9 1359 aa10.24□□□□□ -0.77
LDHA-204ENST00000396222 SRPK2P78362 688 aaKnown RBP10.24□□□□□ -0.77
LDHA-204ENST00000396222 ANKLE2Q86XL3 938 aa10.24□□□□□ -0.77
LDHA-204ENST00000396222 KLHL34Q8N239 644 aa10.24□□□□□ -0.77
LDHA-204ENST00000396222 TMC1Q8TDI8 760 aa10.24□□□□□ -0.77
LDHA-204ENST00000396222 TBX22Q9Y458 520 aa10.24□□□□□ -0.77
LDHA-204ENST00000396222 TECPR2O15040 1411 aa10.23□□□□□ -0.77
LDHA-204ENST00000396222 ZNF142P52746 1687 aaPredicted RBP10.23□□□□□ -0.77
LDHA-204ENST00000396222 BRD4O60885 1362 aaPredicted RBP10.22□□□□□ -0.77
LDHA-204ENST00000396222 NRXN3Q9Y4C0 1643 aa10.22□□□□□ -0.77
LDHA-204ENST00000396222 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
LDHA-204ENST00000396222 SETD1AO15047 1707 aaKnown RBP10.22□□□□□ -0.77
LDHA-204ENST00000396222 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
LDHA-204ENST00000396222 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
LDHA-204ENST00000396222 PIK3R4Q99570 1358 aa10.22□□□□□ -0.77
LDHA-204ENST00000396222 LTKP29376 864 aa10.21□□□□□ -0.77
LDHA-204ENST00000396222 TERF2IPQ9NYB0 399 aa10.21□□□□□ -0.77
LDHA-204ENST00000396222 METP08581 1390 aa10.21□□□□□ -0.77
LDHA-204ENST00000396222 CPS1P31327 1500 aa10.21□□□□□ -0.78
LDHA-204ENST00000396222 SAFB2Q14151 953 aaKnown RBP eCLIP10.21□□□□□ -0.78
LDHA-204ENST00000396222 MYOM1P52179 1685 aa10.2□□□□□ -0.78
LDHA-204ENST00000396222 MINK1Q8N4C8 1332 aaPredicted RBP10.2□□□□□ -0.78
LDHA-204ENST00000396222 ADAMTS13Q76LX8 1427 aa10.2□□□□□ -0.78
LDHA-204ENST00000396222 ANKRD36BQ8N2N9 1353 aa10.2□□□□□ -0.78
LDHA-204ENST00000396222 CNGB1Q14028 1251 aaPredicted RBP10.19□□□□□ -0.78
LDHA-204ENST00000396222 CCDC184Q52MB2 194 aa10.19□□□□□ -0.78
LDHA-204ENST00000396222 HDGFL2Q7Z4V5 671 aaPredicted RBP10.19□□□□□ -0.78
LDHA-204ENST00000396222 TULP4Q9NRJ4 1543 aa10.19□□□□□ -0.78
LDHA-204ENST00000396222 MED14O60244 1454 aa10.19□□□□□ -0.78
LDHA-204ENST00000396222 CGNL1Q0VF96 1302 aa10.19□□□□□ -0.78
LDHA-204ENST00000396222 POLA2Q14181 598 aa10.19□□□□□ -0.78
LDHA-204ENST00000396222 CC2D1BQ5T0F9 858 aaKnown RBP10.19□□□□□ -0.78
LDHA-204ENST00000396222 NSD2O96028 1365 aa10.18□□□□□ -0.78
LDHA-204ENST00000396222 CDK19Q9BWU1 502 aa10.18□□□□□ -0.78
LDHA-204ENST00000396222 CABP2Q9NPB3 220 aa10.18□□□□□ -0.78
LDHA-204ENST00000396222 PTCH1Q13635 1447 aa10.17□□□□□ -0.78
LDHA-204ENST00000396222 WASLO00401 505 aaPredicted RBP10.17□□□□□ -0.78
LDHA-204ENST00000396222 SLC26A8Q96RN1 970 aa10.17□□□□□ -0.78
LDHA-204ENST00000396222 WAPLQ7Z5K2 1190 aa10.16□□□□□ -0.78
LDHA-204ENST00000396222 FAM9BQ8IZU0 186 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms