RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 CDC42BPGQ6DT37 1551 aa23.98■■□□□ 1.43
CXCL12-206ENST00000395795 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
CXCL12-206ENST00000395795 YTHDC2Q9H6S0 1430 aaKnown RBP23.96■■□□□ 1.43
CXCL12-206ENST00000395795 PNPLA6Q8IY17 1366 aa23.95■■□□□ 1.42
CXCL12-206ENST00000395795 STK26Q9P289 416 aa23.95■■□□□ 1.42
CXCL12-206ENST00000395795 SOS2Q07890 1332 aaPredicted RBP23.94■■□□□ 1.42
CXCL12-206ENST00000395795 CFAP70Q5T0N1 1121 aa23.93■■□□□ 1.42
CXCL12-206ENST00000395795 LRRC59Q96AG4 307 aaKnown RBP23.92■■□□□ 1.42
CXCL12-206ENST00000395795 SIRT1Q96EB6 747 aa23.9■■□□□ 1.42
CXCL12-206ENST00000395795 ADGRB1O14514 1584 aa23.89■■□□□ 1.41
CXCL12-206ENST00000395795 DHX57Q6P158 1386 aaKnown RBP23.87■■□□□ 1.41
CXCL12-206ENST00000395795 NUTM2BA6NNL0 878 aaPredicted RBP23.86■■□□□ 1.41
CXCL12-206ENST00000395795 NUTM2EB1AL46 878 aaPredicted RBP23.86■■□□□ 1.41
CXCL12-206ENST00000395795 NUTM2AQ8IVF1 878 aaPredicted RBP23.86■■□□□ 1.41
CXCL12-206ENST00000395795 PXDNQ92626 1479 aa23.86■■□□□ 1.41
CXCL12-206ENST00000395795 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
CXCL12-206ENST00000395795 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
CXCL12-206ENST00000395795 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
CXCL12-206ENST00000395795 DLC1Q96QB1 1528 aa23.82■■□□□ 1.4
CXCL12-206ENST00000395795 NUTM2FA1L443 756 aa23.8■■□□□ 1.4
CXCL12-206ENST00000395795 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
CXCL12-206ENST00000395795 COL22A1Q8NFW1 1626 aaPredicted RBP23.8■■□□□ 1.4
CXCL12-206ENST00000395795 AFF2P51816 1311 aa23.79■■□□□ 1.4
CXCL12-206ENST00000395795 FOXO3O43524 673 aa23.78■■□□□ 1.4
CXCL12-206ENST00000395795 DCAF11Q8TEB1 546 aa23.78■■□□□ 1.4
CXCL12-206ENST00000395795 PRAM1Q96QH2 718 aa23.78■■□□□ 1.4
CXCL12-206ENST00000395795 NPHP3Q7Z494 1330 aa23.78■■□□□ 1.4
CXCL12-206ENST00000395795 KDM2AQ9Y2K7 1162 aa23.77■■□□□ 1.4
CXCL12-206ENST00000395795 XPCQ01831 940 aaPredicted RBP23.76■■□□□ 1.39
CXCL12-206ENST00000395795 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
CXCL12-206ENST00000395795 USP32Q8NFA0 1604 aa23.73■■□□□ 1.39
CXCL12-206ENST00000395795 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
CXCL12-206ENST00000395795 SAFB2Q14151 953 aaKnown RBP eCLIP23.73■■□□□ 1.39
CXCL12-206ENST00000395795 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
CXCL12-206ENST00000395795 C8orf37Q96NL8 207 aa23.73■■□□□ 1.39
CXCL12-206ENST00000395795 KIF1AQ12756 1690 aa23.71■■□□□ 1.39
CXCL12-206ENST00000395795 ADAMTS2O95450 1211 aa23.71■■□□□ 1.39
CXCL12-206ENST00000395795 CDK12Q9NYV4 1490 aaPredicted RBP23.7■■□□□ 1.38
CXCL12-206ENST00000395795 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
CXCL12-206ENST00000395795 SPATA31A3Q5VYP0 1347 aa23.69■■□□□ 1.38
CXCL12-206ENST00000395795 RXRBP28702 533 aa23.68■■□□□ 1.38
CXCL12-206ENST00000395795 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
CXCL12-206ENST00000395795 PRR36Q9H6K5 1346 aa23.66■■□□□ 1.38
CXCL12-206ENST00000395795 PHF8Q9UPP1 1060 aa23.66■■□□□ 1.38
CXCL12-206ENST00000395795 ANKARQ7Z5J8 1434 aa23.66■■□□□ 1.38
CXCL12-206ENST00000395795 NGLY1Q96IV0 654 aa23.65■■□□□ 1.38
CXCL12-206ENST00000395795 QTRT2Q9H974 415 aaKnown RBP23.65■■□□□ 1.38
CXCL12-206ENST00000395795 POGKQ9P215 609 aa23.65■■□□□ 1.38
CXCL12-206ENST00000395795 KRT28Q7Z3Y7 464 aa23.64■■□□□ 1.37
CXCL12-206ENST00000395795 HIRIP3Q9BW71 556 aaPredicted RBP23.64■■□□□ 1.37
CXCL12-206ENST00000395795 RGS12O14924 1447 aa23.64■■□□□ 1.37
CXCL12-206ENST00000395795 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.37
CXCL12-206ENST00000395795 BCL9LQ86UU0 1499 aa23.62■■□□□ 1.37
CXCL12-206ENST00000395795 MINK1Q8N4C8 1332 aaPredicted RBP23.62■■□□□ 1.37
CXCL12-206ENST00000395795 RBM6P78332 1123 aaKnown RBP23.61■■□□□ 1.37
CXCL12-206ENST00000395795 ATRNO75882 1429 aa23.6■■□□□ 1.37
CXCL12-206ENST00000395795 TNS3Q68CZ2 1445 aa23.6■■□□□ 1.37
CXCL12-206ENST00000395795 MARF1Q9Y4F3 1742 aaKnown RBP23.6■■□□□ 1.37
CXCL12-206ENST00000395795 SBNO1A3KN83 1393 aa23.6■■□□□ 1.37
CXCL12-206ENST00000395795 TULP4Q9NRJ4 1543 aa23.59■■□□□ 1.37
CXCL12-206ENST00000395795 KIAA1210Q9ULL0 1709 aa23.59■■□□□ 1.37
CXCL12-206ENST00000395795 WASLO00401 505 aaPredicted RBP23.59■■□□□ 1.37
CXCL12-206ENST00000395795 NBPF1Q3BBV0 1214 aa23.59■■□□□ 1.37
CXCL12-206ENST00000395795 UPF1Q92900 1129 aaKnown RBP eCLIP23.59■■□□□ 1.37
CXCL12-206ENST00000395795 USP21Q9UK80 565 aa23.59■■□□□ 1.37
CXCL12-206ENST00000395795 PMFBP1Q8TBY8 1022 aa23.58■■□□□ 1.37
CXCL12-206ENST00000395795 TRPM3Q9HCF6 1732 aaPredicted RBP23.57■■□□□ 1.36
CXCL12-206ENST00000395795 SLIT2O94813 1529 aa23.56■■□□□ 1.36
CXCL12-206ENST00000395795 ATP7BP35670 1465 aa23.55■■□□□ 1.36
CXCL12-206ENST00000395795 TRPC5Q9UL62 973 aaPredicted RBP23.54■■□□□ 1.36
CXCL12-206ENST00000395795 ABCA3Q99758 1704 aa23.53■■□□□ 1.36
CXCL12-206ENST00000395795 CABLES1Q8TDN4 633 aa23.53■■□□□ 1.36
CXCL12-206ENST00000395795 PSME1Q06323 249 aa23.52■■□□□ 1.36
CXCL12-206ENST00000395795 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
CXCL12-206ENST00000395795 SIN3AQ96ST3 1273 aa23.52■■□□□ 1.36
CXCL12-206ENST00000395795 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
CXCL12-206ENST00000395795 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
CXCL12-206ENST00000395795 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.5■■□□□ 1.35
CXCL12-206ENST00000395795 NUDT16Q96DE0 195 aaKnown RBP23.48■■□□□ 1.35
CXCL12-206ENST00000395795 ARHGEF10O15013 1369 aa23.48■■□□□ 1.35
CXCL12-206ENST00000395795 GLI3P10071 1580 aa23.46■■□□□ 1.35
CXCL12-206ENST00000395795 UNC5CLQ8IV45 518 aa23.46■■□□□ 1.35
CXCL12-206ENST00000395795 TOPAZ1Q8N9V7 1692 aa23.46■■□□□ 1.35
CXCL12-206ENST00000395795 CDK19Q9BWU1 502 aa23.46■■□□□ 1.35
CXCL12-206ENST00000395795 CRYBG1Q9Y4K1 1723 aa23.45■■□□□ 1.34
CXCL12-206ENST00000395795 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
CXCL12-206ENST00000395795 RALGAPBQ86X10 1494 aa23.43■■□□□ 1.34
CXCL12-206ENST00000395795 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
CXCL12-206ENST00000395795 GPRASP1Q5JY77 1395 aa23.42■■□□□ 1.34
CXCL12-206ENST00000395795 FAM83GA6ND36 823 aa23.42■■□□□ 1.34
CXCL12-206ENST00000395795 ITSN1Q15811 1721 aa23.42■■□□□ 1.34
CXCL12-206ENST00000395795 PLCH1Q4KWH8 1693 aa23.41■■□□□ 1.34
CXCL12-206ENST00000395795 LMOD2Q6P5Q4 547 aa23.41■■□□□ 1.34
CXCL12-206ENST00000395795 TRPM1Q7Z4N2 1603 aa23.41■■□□□ 1.34
CXCL12-206ENST00000395795 PLEKHG5O94827 1062 aa23.4■■□□□ 1.34
CXCL12-206ENST00000395795 NGDNQ8NEJ9 315 aaKnown RBP23.4■■□□□ 1.34
CXCL12-206ENST00000395795 NWD2Q9ULI1 1742 aa23.39■■□□□ 1.34
CXCL12-206ENST00000395795 PLEKHG3A1L390 1219 aa23.39■■□□□ 1.33
CXCL12-206ENST00000395795 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
CXCL12-206ENST00000395795 CCDC61Q9Y6R9 512 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms