RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 GOLGA2Q08379 1002 aa23.59■■□□□ 1.37
SREBF1-204ENST00000395756 GGNBP2Q9H3C7 697 aa23.59■■□□□ 1.37
SREBF1-204ENST00000395756 SPINK5Q9NQ38 1064 aaPredicted RBP23.58■■□□□ 1.37
SREBF1-204ENST00000395756 CGNL1Q0VF96 1302 aa23.57■■□□□ 1.36
SREBF1-204ENST00000395756 NPC1L1Q9UHC9 1359 aa23.57■■□□□ 1.36
SREBF1-204ENST00000395756 PIK3C2BO00750 1634 aa23.56■■□□□ 1.36
SREBF1-204ENST00000395756 SETBP1Q9Y6X0 1596 aa23.55■■□□□ 1.36
SREBF1-204ENST00000395756 C20orf194Q5TEA3 1177 aa23.54■■□□□ 1.36
SREBF1-204ENST00000395756 DMRT2Q9Y5R5 561 aa23.54■■□□□ 1.36
SREBF1-204ENST00000395756 DUSP27Q5VZP5 1158 aa23.54■■□□□ 1.36
SREBF1-204ENST00000395756 CDK19Q9BWU1 502 aa23.53■■□□□ 1.36
SREBF1-204ENST00000395756 CABP1Q9NZU7 370 aa23.52■■□□□ 1.36
SREBF1-204ENST00000395756 CRBNQ96SW2 442 aa23.51■■□□□ 1.35
SREBF1-204ENST00000395756 QRICH2Q9H0J4 1663 aa23.51■■□□□ 1.35
SREBF1-204ENST00000395756 CEBPAP49715 358 aaPredicted RBP23.51■■□□□ 1.35
SREBF1-204ENST00000395756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.5■■□□□ 1.35
SREBF1-204ENST00000395756 FBLN1P23142 703 aa23.49■■□□□ 1.35
SREBF1-204ENST00000395756 TXNDC2Q86VQ3 553 aa23.49■■□□□ 1.35
SREBF1-204ENST00000395756 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
SREBF1-204ENST00000395756 ZMYM3Q14202 1370 aa23.48■■□□□ 1.35
SREBF1-204ENST00000395756 U2AF1L5P0DN76 240 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-204ENST00000395756 U2AF1Q01081 240 aaKnown RBP eCLIP23.48■■□□□ 1.35
SREBF1-204ENST00000395756 PREX1Q8TCU6 1659 aa23.48■■□□□ 1.35
SREBF1-204ENST00000395756 MYO5BQ9ULV0 1848 aa23.47■■□□□ 1.35
SREBF1-204ENST00000395756 PPM1GO15355 546 aaPredicted RBP23.47■■□□□ 1.35
SREBF1-204ENST00000395756 ZMYM4Q5VZL5 1548 aa23.47■■□□□ 1.35
SREBF1-204ENST00000395756 TULP4Q9NRJ4 1543 aa23.47■■□□□ 1.35
SREBF1-204ENST00000395756 U2SURPO15042 1029 aaKnown RBP23.47■■□□□ 1.35
SREBF1-204ENST00000395756 SLFN5Q08AF3 891 aa23.47■■□□□ 1.35
SREBF1-204ENST00000395756 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
SREBF1-204ENST00000395756 SKAP1Q86WV1 359 aa23.46■■□□□ 1.35
SREBF1-204ENST00000395756 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
SREBF1-204ENST00000395756 ANKRD36BQ8N2N9 1353 aa23.45■■□□□ 1.35
SREBF1-204ENST00000395756 TMEM131LA2VDJ0 1609 aa23.45■■□□□ 1.35
SREBF1-204ENST00000395756 PPP6R1Q9UPN7 881 aa23.45■■□□□ 1.34
SREBF1-204ENST00000395756 ZNF521Q96K83 1311 aa23.45■■□□□ 1.34
SREBF1-204ENST00000395756 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
SREBF1-204ENST00000395756 TCP11L2Q8N4U5 519 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 ZFYVE9O95405 1425 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 RIMS2Q9UQ26 1411 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 MYO3AQ8NEV4 1616 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 NUTM2FA1L443 756 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 BCAR3O75815 825 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 TRHP20396 242 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-204ENST00000395756 ZC3H13Q5T200 1668 aaKnown RBP23.43■■□□□ 1.34
SREBF1-204ENST00000395756 INSRP06213 1382 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 NCKAP5LQ9HCH0 1330 aa23.43■■□□□ 1.34
SREBF1-204ENST00000395756 FYB1O15117 783 aa23.42■■□□□ 1.34
SREBF1-204ENST00000395756 CLTCQ00610 1675 aaKnown RBP23.42■■□□□ 1.34
SREBF1-204ENST00000395756 WWC1Q8IX03 1113 aa23.41■■□□□ 1.34
SREBF1-204ENST00000395756 POLR3AO14802 1390 aaPredicted RBP23.41■■□□□ 1.34
SREBF1-204ENST00000395756 HDGFL2Q7Z4V5 671 aaPredicted RBP23.41■■□□□ 1.34
SREBF1-204ENST00000395756 A2ML1A8K2U0 1454 aa23.4■■□□□ 1.34
SREBF1-204ENST00000395756 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
SREBF1-204ENST00000395756 PTPRMP28827 1452 aa23.38■■□□□ 1.33
SREBF1-204ENST00000395756 ARHGEF28Q8N1W1 1705 aaKnown RBP23.37■■□□□ 1.33
SREBF1-204ENST00000395756 PUS7Q96PZ0 661 aaKnown RBP23.37■■□□□ 1.33
SREBF1-204ENST00000395756 ALKQ9UM73 1620 aa23.36■■□□□ 1.33
SREBF1-204ENST00000395756 METP08581 1390 aa23.36■■□□□ 1.33
SREBF1-204ENST00000395756 E9PSI1 815 aa23.36■■□□□ 1.33
SREBF1-204ENST00000395756 ATAD2Q6PL18 1390 aa23.35■■□□□ 1.33
SREBF1-204ENST00000395756 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
SREBF1-204ENST00000395756 AGLP35573 1532 aa23.34■■□□□ 1.33
SREBF1-204ENST00000395756 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
SREBF1-204ENST00000395756 FRAT1Q92837 279 aaPredicted RBP23.33■■□□□ 1.33
SREBF1-204ENST00000395756 MSH5O43196 834 aa23.33■■□□□ 1.33
SREBF1-204ENST00000395756 CANXP27824 592 aaKnown RBP23.32■■□□□ 1.32
SREBF1-204ENST00000395756 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.32■■□□□ 1.32
SREBF1-204ENST00000395756 ZRANB1Q9UGI0 708 aa23.32■■□□□ 1.32
SREBF1-204ENST00000395756 TNRQ92752 1358 aa23.31■■□□□ 1.32
SREBF1-204ENST00000395756 TRMT2AQ8IZ69 625 aaKnown RBP23.3■■□□□ 1.32
SREBF1-204ENST00000395756 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.3■■□□□ 1.32
SREBF1-204ENST00000395756 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
SREBF1-204ENST00000395756 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
SREBF1-204ENST00000395756 WASLO00401 505 aaPredicted RBP23.28■■□□□ 1.32
SREBF1-204ENST00000395756 LTKP29376 864 aa23.28■■□□□ 1.32
SREBF1-204ENST00000395756 NME9Q86XW9 330 aa23.27■■□□□ 1.32
SREBF1-204ENST00000395756 KIF13AQ9H1H9 1805 aa23.27■■□□□ 1.31
SREBF1-204ENST00000395756 NUDT16Q96DE0 195 aaKnown RBP23.26■■□□□ 1.31
SREBF1-204ENST00000395756 NPM2Q86SE8 214 aaKnown RBP23.25■■□□□ 1.31
SREBF1-204ENST00000395756 NKTRP30414 1462 aaKnown RBP23.25■■□□□ 1.31
SREBF1-204ENST00000395756 SPATA31D1Q6ZQQ2 1576 aa23.25■■□□□ 1.31
SREBF1-204ENST00000395756 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
SREBF1-204ENST00000395756 PANK1Q8TE04 598 aa23.24■■□□□ 1.31
SREBF1-204ENST00000395756 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
SREBF1-204ENST00000395756 NSD2O96028 1365 aa23.24■■□□□ 1.31
SREBF1-204ENST00000395756 DIAPH1O60610 1272 aaKnown RBP23.24■■□□□ 1.31
SREBF1-204ENST00000395756 CD163L1Q9NR16 1453 aa23.23■■□□□ 1.31
SREBF1-204ENST00000395756 SOX12O15370 315 aa23.23■■□□□ 1.31
SREBF1-204ENST00000395756 MAPK8IP3Q9UPT6 1336 aa23.23■■□□□ 1.31
SREBF1-204ENST00000395756 HMOX1P09601 288 aa23.22■■□□□ 1.31
SREBF1-204ENST00000395756 CLUAP1Q96AJ1 413 aa23.22■■□□□ 1.31
SREBF1-204ENST00000395756 EMILIN1Q9Y6C2 1016 aa23.22■■□□□ 1.31
SREBF1-204ENST00000395756 NINLQ9Y2I6 1382 aa23.22■■□□□ 1.31
SREBF1-204ENST00000395756 REREQ9P2R6 1566 aa23.22■■□□□ 1.31
SREBF1-204ENST00000395756 COG6Q9Y2V7 657 aa23.22■■□□□ 1.31
SREBF1-204ENST00000395756 RRS1Q15050 365 aaKnown RBP23.2■■□□□ 1.3
SREBF1-204ENST00000395756 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
SREBF1-204ENST00000395756 TMEM2Q9UHN6 1383 aa23.2■■□□□ 1.3
SREBF1-204ENST00000395756 POLKQ9UBT6 870 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms