RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TECPR2O15040 1411 aa20.27■□□□□ 0.84
CCT4-201ENST00000394440 ADAMTS13Q76LX8 1427 aa20.27■□□□□ 0.84
CCT4-201ENST00000394440 CPS1P31327 1500 aa20.26■□□□□ 0.83
CCT4-201ENST00000394440 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
CCT4-201ENST00000394440 ZBED9Q6R2W3 1325 aa20.25■□□□□ 0.83
CCT4-201ENST00000394440 MED14O60244 1454 aa20.24■□□□□ 0.83
CCT4-201ENST00000394440 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCT4-201ENST00000394440 SLC12A5Q9H2X9 1139 aa20.24■□□□□ 0.83
CCT4-201ENST00000394440 NINLQ9Y2I6 1382 aa20.24■□□□□ 0.83
CCT4-201ENST00000394440 LMTK3Q96Q04 1460 aa20.23■□□□□ 0.83
CCT4-201ENST00000394440 LTKP29376 864 aa20.23■□□□□ 0.83
CCT4-201ENST00000394440 POGKQ9P215 609 aa20.23■□□□□ 0.83
CCT4-201ENST00000394440 CEP170BQ9Y4F5 1589 aaPredicted RBP20.23■□□□□ 0.83
CCT4-201ENST00000394440 ANKRD36BQ8N2N9 1353 aa20.22■□□□□ 0.83
CCT4-201ENST00000394440 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
CCT4-201ENST00000394440 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
CCT4-201ENST00000394440 ZNF142P52746 1687 aaPredicted RBP20.21■□□□□ 0.83
CCT4-201ENST00000394440 FAM135BQ49AJ0 1406 aa20.21■□□□□ 0.83
CCT4-201ENST00000394440 PLEKHH1Q9ULM0 1364 aa20.21■□□□□ 0.83
CCT4-201ENST00000394440 CABP2Q9NPB3 220 aa20.21■□□□□ 0.83
CCT4-201ENST00000394440 ATAD2Q6PL18 1390 aa20.21■□□□□ 0.83
CCT4-201ENST00000394440 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
CCT4-201ENST00000394440 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
CCT4-201ENST00000394440 INSRP06213 1382 aa20.2■□□□□ 0.82
CCT4-201ENST00000394440 SIRT1Q96EB6 747 aa20.19■□□□□ 0.82
CCT4-201ENST00000394440 DIP2AQ14689 1571 aa20.17■□□□□ 0.82
CCT4-201ENST00000394440 TXNDC2Q86VQ3 553 aa20.17■□□□□ 0.82
CCT4-201ENST00000394440 CD163L1Q9NR16 1453 aa20.17■□□□□ 0.82
CCT4-201ENST00000394440 WAPLQ7Z5K2 1190 aa20.17■□□□□ 0.82
CCT4-201ENST00000394440 SRPK2P78362 688 aaKnown RBP20.16■□□□□ 0.82
CCT4-201ENST00000394440 SETD1BQ9UPS6 1966 aaKnown RBP20.16■□□□□ 0.82
CCT4-201ENST00000394440 THEMISQ8N1K5 641 aaPredicted RBP20.16■□□□□ 0.82
CCT4-201ENST00000394440 EID1Q9Y6B2 187 aa20.15■□□□□ 0.82
CCT4-201ENST00000394440 A0A1W2PP64 1363 aa20.15■□□□□ 0.82
CCT4-201ENST00000394440 BLMP54132 1417 aaPredicted RBP20.15■□□□□ 0.82
CCT4-201ENST00000394440 ADGRB2O60241 1585 aa20.14■□□□□ 0.81
CCT4-201ENST00000394440 CDK19Q9BWU1 502 aa20.14■□□□□ 0.81
CCT4-201ENST00000394440 ANKRD26Q9UPS8 1709 aa20.13■□□□□ 0.81
CCT4-201ENST00000394440 NSD2O96028 1365 aa20.12■□□□□ 0.81
CCT4-201ENST00000394440 PTPRUQ92729 1446 aa20.12■□□□□ 0.81
CCT4-201ENST00000394440 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
CCT4-201ENST00000394440 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.11■□□□□ 0.81
CCT4-201ENST00000394440 BCANQ96GW7 911 aa20.11■□□□□ 0.81
CCT4-201ENST00000394440 CGNL1Q0VF96 1302 aa20.11■□□□□ 0.81
CCT4-201ENST00000394440 ATP7BP35670 1465 aa20.1■□□□□ 0.81
CCT4-201ENST00000394440 XRN1Q8IZH2 1706 aaKnown RBP20.09■□□□□ 0.81
CCT4-201ENST00000394440 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
CCT4-201ENST00000394440 ILDR1Q86SU0 546 aaPredicted RBP20.09■□□□□ 0.81
CCT4-201ENST00000394440 KIF20BQ96Q89 1820 aa20.08■□□□□ 0.81
CCT4-201ENST00000394440 WASLO00401 505 aaPredicted RBP20.07■□□□□ 0.8
CCT4-201ENST00000394440 HSPA2P54652 639 aa20.07■□□□□ 0.8
CCT4-201ENST00000394440 PTCH1Q13635 1447 aa20.07■□□□□ 0.8
CCT4-201ENST00000394440 SLC26A8Q96RN1 970 aa20.07■□□□□ 0.8
CCT4-201ENST00000394440 TERF2IPQ9NYB0 399 aa20.07■□□□□ 0.8
CCT4-201ENST00000394440 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
CCT4-201ENST00000394440 POLR3AO14802 1390 aaPredicted RBP20.05■□□□□ 0.8
CCT4-201ENST00000394440 SMG6Q86US8 1419 aaKnown RBP20.05■□□□□ 0.8
CCT4-201ENST00000394440 TOPAZ1Q8N9V7 1692 aa20.04■□□□□ 0.8
CCT4-201ENST00000394440 MORC1Q86VD1 984 aa20.04■□□□□ 0.8
CCT4-201ENST00000394440 AKAP12Q02952 1782 aa20.04■□□□□ 0.8
CCT4-201ENST00000394440 MON2Q7Z3U7 1717 aa20.04■□□□□ 0.8
CCT4-201ENST00000394440 CABP1Q9NZU7 370 aa20.04■□□□□ 0.8
CCT4-201ENST00000394440 CDC42BPGQ6DT37 1551 aa20.03■□□□□ 0.8
CCT4-201ENST00000394440 SUPT16HQ9Y5B9 1047 aaKnown RBP20.03■□□□□ 0.8
CCT4-201ENST00000394440 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
CCT4-201ENST00000394440 CPSF1Q10570 1443 aaKnown RBP20.02■□□□□ 0.8
CCT4-201ENST00000394440 PIK3R4Q99570 1358 aa20.02■□□□□ 0.79
CCT4-201ENST00000394440 ITSN1Q15811 1721 aa20.02■□□□□ 0.79
CCT4-201ENST00000394440 HDGFL2Q7Z4V5 671 aaPredicted RBP20.01■□□□□ 0.79
CCT4-201ENST00000394440 PPIP5K1Q6PFW1 1433 aa20.01■□□□□ 0.79
CCT4-201ENST00000394440 CHD2O14647 1828 aaKnown RBP20■□□□□ 0.79
CCT4-201ENST00000394440 WDR43Q15061 677 aaKnown RBP eCLIP20■□□□□ 0.79
CCT4-201ENST00000394440 AMOTL2Q9Y2J4 779 aa20■□□□□ 0.79
CCT4-201ENST00000394440 NUDT16Q96DE0 195 aaKnown RBP19.98■□□□□ 0.79
CCT4-201ENST00000394440 SENP3-EIF4A1A0A087X0R7 540 aa19.98■□□□□ 0.79
CCT4-201ENST00000394440 FYB1O15117 783 aa19.98■□□□□ 0.79
CCT4-201ENST00000394440 NUDCQ9Y266 331 aa19.98■□□□□ 0.79
CCT4-201ENST00000394440 PRR36Q9H6K5 1346 aa19.98■□□□□ 0.79
CCT4-201ENST00000394440 CCDC61Q9Y6R9 512 aa19.96■□□□□ 0.79
CCT4-201ENST00000394440 EDC4Q6P2E9 1401 aaKnown RBP19.96■□□□□ 0.79
CCT4-201ENST00000394440 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
CCT4-201ENST00000394440 NRKQ7Z2Y5 1582 aa19.95■□□□□ 0.78
CCT4-201ENST00000394440 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
CCT4-201ENST00000394440 TNNT2P45379 298 aaPredicted RBP19.94■□□□□ 0.78
CCT4-201ENST00000394440 FKBP8Q14318 412 aa19.94■□□□□ 0.78
CCT4-201ENST00000394440 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
CCT4-201ENST00000394440 STRCQ7RTU9 1775 aa19.93■□□□□ 0.78
CCT4-201ENST00000394440 NEFLP07196 543 aa19.93■□□□□ 0.78
CCT4-201ENST00000394440 MTHFSP49914 203 aa19.93■□□□□ 0.78
CCT4-201ENST00000394440 NCKAP5LQ9HCH0 1330 aa19.92■□□□□ 0.78
CCT4-201ENST00000394440 COL3A1P02461 1466 aaPredicted RBP19.91■□□□□ 0.78
CCT4-201ENST00000394440 NKTRP30414 1462 aaKnown RBP19.91■□□□□ 0.78
CCT4-201ENST00000394440 RGPD8O14715 1765 aaPredicted RBP19.91■□□□□ 0.78
CCT4-201ENST00000394440 KCNA6P17658 529 aa19.9■□□□□ 0.78
CCT4-201ENST00000394440 FMN2Q9NZ56 1722 aa19.89■□□□□ 0.78
CCT4-201ENST00000394440 NALCNQ8IZF0 1738 aa19.89■□□□□ 0.77
CCT4-201ENST00000394440 NPHP4O75161 1426 aaPredicted RBP19.88■□□□□ 0.77
CCT4-201ENST00000394440 FBXO41Q8TF61 875 aa19.88■□□□□ 0.77
CCT4-201ENST00000394440 SALL2Q9Y467 1007 aaPredicted RBP19.88■□□□□ 0.77
CCT4-201ENST00000394440 MAP2P11137 1827 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms