RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 PREX1Q8TCU6 1659 aa27.89■■■□□ 2.06
CLDND1-202ENST00000394180 CHGAP10645 457 aaKnown RBP27.88■■■□□ 2.05
CLDND1-202ENST00000394180 SKAP1Q86WV1 359 aa27.88■■■□□ 2.05
CLDND1-202ENST00000394180 ERVK-7P63135 1459 aa27.86■■■□□ 2.05
CLDND1-202ENST00000394180 IDI1Q13907 227 aa27.86■■■□□ 2.05
CLDND1-202ENST00000394180 MAPK8IP3Q9UPT6 1336 aa27.85■■■□□ 2.05
CLDND1-202ENST00000394180 CEBPAP49715 358 aaPredicted RBP27.84■■■□□ 2.05
CLDND1-202ENST00000394180 PLPPR3Q6T4P5 718 aa27.84■■■□□ 2.05
CLDND1-202ENST00000394180 POLR3GLQ9BT43 218 aa27.83■■■□□ 2.05
CLDND1-202ENST00000394180 KIF1BO60333 1816 aa27.83■■■□□ 2.05
CLDND1-202ENST00000394180 ESPNB1AK53 854 aa27.82■■■□□ 2.04
CLDND1-202ENST00000394180 MROH2AA6NES4 1674 aa27.82■■■□□ 2.04
CLDND1-202ENST00000394180 TERF1P54274 439 aa27.82■■■□□ 2.04
CLDND1-202ENST00000394180 PIK3C2BO00750 1634 aa27.81■■■□□ 2.04
CLDND1-202ENST00000394180 NLRP1Q9C000 1473 aa27.81■■■□□ 2.04
CLDND1-202ENST00000394180 FER1L4A9Z1Z3 1794 aa27.79■■■□□ 2.04
CLDND1-202ENST00000394180 SLC52A1Q9NWF4 448 aa27.79■■■□□ 2.04
CLDND1-202ENST00000394180 C20orf194Q5TEA3 1177 aa27.79■■■□□ 2.04
CLDND1-202ENST00000394180 SPATA31D1Q6ZQQ2 1576 aa27.78■■■□□ 2.04
CLDND1-202ENST00000394180 ADGRB3O60242 1522 aa27.77■■■□□ 2.04
CLDND1-202ENST00000394180 MCM4P33991 863 aa27.77■■■□□ 2.04
CLDND1-202ENST00000394180 MAP7D2Q96T17 732 aa27.77■■■□□ 2.04
CLDND1-202ENST00000394180 MYH16Q9H6N6 1097 aa27.77■■■□□ 2.04
CLDND1-202ENST00000394180 SENP3-EIF4A1A0A087X0R7 540 aa27.76■■■□□ 2.03
CLDND1-202ENST00000394180 CNGB1Q14028 1251 aaPredicted RBP27.75■■■□□ 2.03
CLDND1-202ENST00000394180 PRAG1Q86YV5 1406 aa27.74■■■□□ 2.03
CLDND1-202ENST00000394180 CARD11Q9BXL7 1154 aa27.74■■■□□ 2.03
CLDND1-202ENST00000394180 MADDQ8WXG6 1647 aa27.73■■■□□ 2.03
CLDND1-202ENST00000394180 NEURL4Q96JN8 1562 aa27.73■■■□□ 2.03
CLDND1-202ENST00000394180 PER1O15534 1290 aaPredicted RBP27.72■■■□□ 2.03
CLDND1-202ENST00000394180 NINLQ9Y2I6 1382 aa27.72■■■□□ 2.03
CLDND1-202ENST00000394180 DUSP27Q5VZP5 1158 aa27.71■■■□□ 2.03
CLDND1-202ENST00000394180 C3P01024 1663 aa27.71■■■□□ 2.03
CLDND1-202ENST00000394180 RGS3P49796 1198 aa27.71■■■□□ 2.03
CLDND1-202ENST00000394180 NUTM2DQ5VT03 806 aaPredicted RBP27.71■■■□□ 2.03
CLDND1-202ENST00000394180 UPF2Q9HAU5 1272 aaKnown RBP27.7■■■□□ 2.02
CLDND1-202ENST00000394180 MYO5BQ9ULV0 1848 aa27.69■■■□□ 2.02
CLDND1-202ENST00000394180 ZNF521Q96K83 1311 aa27.69■■■□□ 2.02
CLDND1-202ENST00000394180 AAMPQ13685 434 aa27.68■■■□□ 2.02
CLDND1-202ENST00000394180 GRPEL1Q9HAV7 217 aa27.68■■■□□ 2.02
CLDND1-202ENST00000394180 TNRQ92752 1358 aa27.68■■■□□ 2.02
CLDND1-202ENST00000394180 PANK2Q9BZ23 570 aa27.68■■■□□ 2.02
CLDND1-202ENST00000394180 STAG3Q9UJ98 1225 aa27.68■■■□□ 2.02
CLDND1-202ENST00000394180 ADGRF5Q8IZF2 1346 aa27.68■■■□□ 2.02
CLDND1-202ENST00000394180 TMEM131LA2VDJ0 1609 aa27.67■■■□□ 2.02
CLDND1-202ENST00000394180 NBPF1Q3BBV0 1214 aa27.67■■■□□ 2.02
CLDND1-202ENST00000394180 DDX11L8A8MPP1 907 aa27.67■■■□□ 2.02
CLDND1-202ENST00000394180 SLKQ9H2G2 1235 aaPredicted RBP27.67■■■□□ 2.02
CLDND1-202ENST00000394180 PRDM4Q9UKN5 801 aa27.67■■■□□ 2.02
CLDND1-202ENST00000394180 RIMS1Q86UR5 1692 aaKnown RBP27.66■■■□□ 2.02
CLDND1-202ENST00000394180 TBC1D32Q96NH3 1257 aa27.66■■■□□ 2.02
CLDND1-202ENST00000394180 ST20-MTHFSA0A0A6YYL1 179 aa27.65■■■□□ 2.02
CLDND1-202ENST00000394180 CHMP5Q9NZZ3 219 aa27.65■■■□□ 2.02
CLDND1-202ENST00000394180 ADAMTSL3P82987 1691 aa27.65■■■□□ 2.02
CLDND1-202ENST00000394180 TRAK2O60296 914 aa27.65■■■□□ 2.02
CLDND1-202ENST00000394180 IFT172Q9UG01 1749 aa27.64■■■□□ 2.02
CLDND1-202ENST00000394180 LAMC1P11047 1609 aa27.64■■■□□ 2.01
CLDND1-202ENST00000394180 TRIM44Q96DX7 344 aaPredicted RBP27.63■■■□□ 2.01
CLDND1-202ENST00000394180 SENP3Q9H4L4 574 aaPredicted RBP27.63■■■□□ 2.01
CLDND1-202ENST00000394180 TRPM1Q7Z4N2 1603 aa27.63■■■□□ 2.01
CLDND1-202ENST00000394180 CGNL1Q0VF96 1302 aa27.63■■■□□ 2.01
CLDND1-202ENST00000394180 PTMSP20962 102 aa27.62■■■□□ 2.01
CLDND1-202ENST00000394180 TRMT2AQ8IZ69 625 aaKnown RBP27.61■■■□□ 2.01
CLDND1-202ENST00000394180 TBC1D2Q9BYX2 928 aa27.61■■■□□ 2.01
CLDND1-202ENST00000394180 PPLO60437 1756 aa27.61■■■□□ 2.01
CLDND1-202ENST00000394180 GOLGA2Q08379 1002 aa27.6■■■□□ 2.01
CLDND1-202ENST00000394180 NEXMIFQ5QGS0 1516 aa27.6■■■□□ 2.01
CLDND1-202ENST00000394180 MYOM2P54296 1465 aa27.6■■■□□ 2.01
CLDND1-202ENST00000394180 RPGRIP1LQ68CZ1 1315 aa27.59■■■□□ 2.01
CLDND1-202ENST00000394180 MTERF4Q7Z6M4 381 aaKnown RBP27.59■■■□□ 2.01
CLDND1-202ENST00000394180 STAC3Q96MF2 364 aa27.59■■■□□ 2.01
CLDND1-202ENST00000394180 A2ML1A8K2U0 1454 aa27.59■■■□□ 2.01
CLDND1-202ENST00000394180 PDE3AQ14432 1141 aa27.58■■■□□ 2.01
CLDND1-202ENST00000394180 ERBB4Q15303 1308 aa27.57■■■□□ 2
CLDND1-202ENST00000394180 CFAP70Q5T0N1 1121 aa27.56■■■□□ 2
CLDND1-202ENST00000394180 NGEFQ8N5V2 710 aa27.55■■■□□ 2
CLDND1-202ENST00000394180 OFD1O75665 1012 aa27.55■■■□□ 2
CLDND1-202ENST00000394180 SLFN5Q08AF3 891 aa27.55■■■□□ 2
CLDND1-202ENST00000394180 NKTRP30414 1462 aaKnown RBP27.54■■■□□ 2
CLDND1-202ENST00000394180 NRXN1Q9ULB1 1477 aa27.54■■■□□ 2
CLDND1-202ENST00000394180 SEC24BO95487 1268 aa27.53■■■□□ 2
CLDND1-202ENST00000394180 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.53■■■□□ 2
CLDND1-202ENST00000394180 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
CLDND1-202ENST00000394180 VGFO15240 615 aaPredicted RBP27.53■■■□□ 2
CLDND1-202ENST00000394180 PLEKHG5O94827 1062 aa27.52■■■□□ 2
CLDND1-202ENST00000394180 SKOR2Q2VWA4 1001 aaPredicted RBP27.52■■■□□ 2
CLDND1-202ENST00000394180 SMAP1Q8IYB5 467 aaPredicted RBP27.52■■■□□ 2
CLDND1-202ENST00000394180 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
CLDND1-202ENST00000394180 PIK3C2GO75747 1445 aa27.51■■□□□ 1.99
CLDND1-202ENST00000394180 CCDC173Q0VFZ6 552 aa27.51■■□□□ 1.99
CLDND1-202ENST00000394180 KIAA1211Q6ZU35 1233 aa27.51■■□□□ 1.99
CLDND1-202ENST00000394180 PPP1R9BQ96SB3 815 aa27.51■■□□□ 1.99
CLDND1-202ENST00000394180 UBR1Q8IWV7 1749 aa27.48■■□□□ 1.99
CLDND1-202ENST00000394180 RBM10P98175 930 aaKnown RBP27.48■■□□□ 1.99
CLDND1-202ENST00000394180 RIMS2Q9UQ26 1411 aa27.48■■□□□ 1.99
CLDND1-202ENST00000394180 IGHDP01880 384 aa27.47■■□□□ 1.99
CLDND1-202ENST00000394180 HS1BP3Q53T59 392 aa27.47■■□□□ 1.99
CLDND1-202ENST00000394180 ZSCAN30Q86W11 494 aa27.47■■□□□ 1.99
CLDND1-202ENST00000394180 PMFBP1Q8TBY8 1022 aa27.46■■□□□ 1.99
CLDND1-202ENST00000394180 ADAMTS8Q9UP79 889 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms