RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 PLEKHH1Q9ULM0 1364 aa19.13■□□□□ 0.65
RNF41-202ENST00000394013 TSHZ2Q9NRE2 1034 aa19.12■□□□□ 0.65
RNF41-202ENST00000394013 B4GALNT3Q6L9W6 998 aa19.12■□□□□ 0.65
RNF41-202ENST00000394013 WDR43Q15061 677 aaKnown RBP eCLIP19.11■□□□□ 0.65
RNF41-202ENST00000394013 NPC1L1Q9UHC9 1359 aa19.1■□□□□ 0.65
RNF41-202ENST00000394013 SLC24A1O60721 1099 aa19.1■□□□□ 0.65
RNF41-202ENST00000394013 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
RNF41-202ENST00000394013 METP08581 1390 aa19.07■□□□□ 0.64
RNF41-202ENST00000394013 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
RNF41-202ENST00000394013 TNRQ92752 1358 aa19.06■□□□□ 0.64
RNF41-202ENST00000394013 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
RNF41-202ENST00000394013 TXNDC2Q86VQ3 553 aa19.05■□□□□ 0.64
RNF41-202ENST00000394013 NRXN3Q9Y4C0 1643 aa19.05■□□□□ 0.64
RNF41-202ENST00000394013 SETD1AO15047 1707 aaKnown RBP19.04■□□□□ 0.64
RNF41-202ENST00000394013 GGNBP2Q9H3C7 697 aa19.04■□□□□ 0.64
RNF41-202ENST00000394013 ANKRD36BQ8N2N9 1353 aa19.03■□□□□ 0.64
RNF41-202ENST00000394013 RNF123Q5XPI4 1314 aa19.03■□□□□ 0.64
RNF41-202ENST00000394013 NCKAP5LQ9HCH0 1330 aa19.03■□□□□ 0.64
RNF41-202ENST00000394013 APAF1O14727 1248 aa19.03■□□□□ 0.64
RNF41-202ENST00000394013 PPP4R2Q9NY27 417 aa19.02■□□□□ 0.64
RNF41-202ENST00000394013 CABP1Q9NZU7 370 aa19.02■□□□□ 0.64
RNF41-202ENST00000394013 PLIN1O60240 522 aa19.01■□□□□ 0.63
RNF41-202ENST00000394013 MTHFSP49914 203 aa19.01■□□□□ 0.63
RNF41-202ENST00000394013 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
RNF41-202ENST00000394013 LTKP29376 864 aa19.01■□□□□ 0.63
RNF41-202ENST00000394013 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
RNF41-202ENST00000394013 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
RNF41-202ENST00000394013 FBLN1P23142 703 aa19■□□□□ 0.63
RNF41-202ENST00000394013 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
RNF41-202ENST00000394013 CD163L1Q9NR16 1453 aa19■□□□□ 0.63
RNF41-202ENST00000394013 PELP1Q8IZL8 1130 aaKnown RBP18.99■□□□□ 0.63
RNF41-202ENST00000394013 UBR1Q8IWV7 1749 aa18.97■□□□□ 0.63
RNF41-202ENST00000394013 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
RNF41-202ENST00000394013 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
RNF41-202ENST00000394013 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
RNF41-202ENST00000394013 SLC26A8Q96RN1 970 aa18.96■□□□□ 0.63
RNF41-202ENST00000394013 PDE3BQ13370 1112 aa18.96■□□□□ 0.63
RNF41-202ENST00000394013 NEUROD2Q15784 382 aa18.96■□□□□ 0.63
RNF41-202ENST00000394013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.96■□□□□ 0.63
RNF41-202ENST00000394013 SHPRHQ149N8 1683 aa18.96■□□□□ 0.63
RNF41-202ENST00000394013 FYB1O15117 783 aa18.95■□□□□ 0.62
RNF41-202ENST00000394013 ZNF521Q96K83 1311 aa18.95■□□□□ 0.62
RNF41-202ENST00000394013 INSRP06213 1382 aa18.95■□□□□ 0.62
RNF41-202ENST00000394013 PUS7Q96PZ0 661 aaKnown RBP18.95■□□□□ 0.62
RNF41-202ENST00000394013 POLR3AO14802 1390 aaPredicted RBP18.95■□□□□ 0.62
RNF41-202ENST00000394013 NUTM2FA1L443 756 aa18.94■□□□□ 0.62
RNF41-202ENST00000394013 EXOC6Q8TAG9 804 aa18.94■□□□□ 0.62
RNF41-202ENST00000394013 DUSP27Q5VZP5 1158 aa18.93■□□□□ 0.62
RNF41-202ENST00000394013 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
RNF41-202ENST00000394013 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
RNF41-202ENST00000394013 ABCC11Q96J66 1382 aa18.93■□□□□ 0.62
RNF41-202ENST00000394013 USP32Q8NFA0 1604 aa18.93■□□□□ 0.62
RNF41-202ENST00000394013 C3P01024 1663 aa18.92■□□□□ 0.62
RNF41-202ENST00000394013 ZRANB1Q9UGI0 708 aa18.92■□□□□ 0.62
RNF41-202ENST00000394013 ERICH6BQ5W0A0 696 aa18.91■□□□□ 0.62
RNF41-202ENST00000394013 ADAMTS13Q76LX8 1427 aa18.91■□□□□ 0.62
RNF41-202ENST00000394013 ROBO2Q9HCK4 1378 aa18.91■□□□□ 0.62
RNF41-202ENST00000394013 TERF2IPQ9NYB0 399 aa18.9■□□□□ 0.62
RNF41-202ENST00000394013 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
RNF41-202ENST00000394013 C20orf194Q5TEA3 1177 aa18.9■□□□□ 0.62
RNF41-202ENST00000394013 NLRP1Q9C000 1473 aa18.89■□□□□ 0.62
RNF41-202ENST00000394013 WASLO00401 505 aaPredicted RBP18.89■□□□□ 0.61
RNF41-202ENST00000394013 DLC1Q96QB1 1528 aa18.89■□□□□ 0.61
RNF41-202ENST00000394013 FER1L4A9Z1Z3 1794 aa18.88■□□□□ 0.61
RNF41-202ENST00000394013 SLFN5Q08AF3 891 aa18.87■□□□□ 0.61
RNF41-202ENST00000394013 HDGFL2Q7Z4V5 671 aaPredicted RBP18.87■□□□□ 0.61
RNF41-202ENST00000394013 CCDC136Q96JN2 1154 aa18.86■□□□□ 0.61
RNF41-202ENST00000394013 PRR36Q9H6K5 1346 aa18.86■□□□□ 0.61
RNF41-202ENST00000394013 U2AF1L5P0DN76 240 aaPredicted RBP18.86■□□□□ 0.61
RNF41-202ENST00000394013 U2AF1Q01081 240 aaKnown RBP eCLIP18.86■□□□□ 0.61
RNF41-202ENST00000394013 TCP11L2Q8N4U5 519 aa18.85■□□□□ 0.61
RNF41-202ENST00000394013 NUDT16Q96DE0 195 aaKnown RBP18.85■□□□□ 0.61
RNF41-202ENST00000394013 PTPRUQ92729 1446 aa18.85■□□□□ 0.61
RNF41-202ENST00000394013 NINLQ9Y2I6 1382 aa18.85■□□□□ 0.61
RNF41-202ENST00000394013 PPM1GO15355 546 aaPredicted RBP18.85■□□□□ 0.61
RNF41-202ENST00000394013 NME9Q86XW9 330 aa18.85■□□□□ 0.61
RNF41-202ENST00000394013 PPIP5K1Q6PFW1 1433 aa18.85■□□□□ 0.61
RNF41-202ENST00000394013 U2SURPO15042 1029 aaKnown RBP18.84■□□□□ 0.61
RNF41-202ENST00000394013 NSD2O96028 1365 aa18.84■□□□□ 0.61
RNF41-202ENST00000394013 HDGFP51858 240 aaKnown RBP18.83■□□□□ 0.61
RNF41-202ENST00000394013 WWC1Q8IX03 1113 aa18.83■□□□□ 0.61
RNF41-202ENST00000394013 CFAP53Q96M91 514 aa18.82■□□□□ 0.6
RNF41-202ENST00000394013 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
RNF41-202ENST00000394013 RBM19Q9Y4C8 960 aaKnown RBP18.82■□□□□ 0.6
RNF41-202ENST00000394013 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.81■□□□□ 0.6
RNF41-202ENST00000394013 RUNDC1Q96C34 613 aa18.81■□□□□ 0.6
RNF41-202ENST00000394013 TRMT2AQ8IZ69 625 aaKnown RBP18.81■□□□□ 0.6
RNF41-202ENST00000394013 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
RNF41-202ENST00000394013 BCAR3O75815 825 aa18.8■□□□□ 0.6
RNF41-202ENST00000394013 SKAP1Q86WV1 359 aa18.79■□□□□ 0.6
RNF41-202ENST00000394013 TECPR2O15040 1411 aa18.79■□□□□ 0.6
RNF41-202ENST00000394013 CPS1P31327 1500 aa18.79■□□□□ 0.6
RNF41-202ENST00000394013 KIF20BQ96Q89 1820 aa18.79■□□□□ 0.6
RNF41-202ENST00000394013 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
RNF41-202ENST00000394013 EID1Q9Y6B2 187 aa18.79■□□□□ 0.6
RNF41-202ENST00000394013 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
RNF41-202ENST00000394013 IQSEC2Q5JU85 1478 aa18.78■□□□□ 0.6
RNF41-202ENST00000394013 EMILIN1Q9Y6C2 1016 aa18.78■□□□□ 0.6
RNF41-202ENST00000394013 KNDC1Q76NI1 1749 aa18.78■□□□□ 0.6
RNF41-202ENST00000394013 ANKRD26Q9UPS8 1709 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms