RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SLC12A5Q9H2X9 1139 aa26.75■■□□□ 1.87
RAB5C-202ENST00000393860 ABCC11Q96J66 1382 aa26.74■■□□□ 1.87
RAB5C-202ENST00000393860 SRPK2P78362 688 aaKnown RBP26.73■■□□□ 1.87
RAB5C-202ENST00000393860 CARD14Q9BXL6 1004 aa26.73■■□□□ 1.87
RAB5C-202ENST00000393860 AMER1Q5JTC6 1135 aaPredicted RBP26.73■■□□□ 1.87
RAB5C-202ENST00000393860 SLC26A8Q96RN1 970 aa26.73■■□□□ 1.87
RAB5C-202ENST00000393860 KNDC1Q76NI1 1749 aa26.72■■□□□ 1.87
RAB5C-202ENST00000393860 HNRNPUQ00839 825 aaKnown RBP eCLIP26.71■■□□□ 1.87
RAB5C-202ENST00000393860 BRD4O60885 1362 aaPredicted RBP26.69■■□□□ 1.86
RAB5C-202ENST00000393860 ZNF142P52746 1687 aaPredicted RBP26.68■■□□□ 1.86
RAB5C-202ENST00000393860 CPS1P31327 1500 aa26.67■■□□□ 1.86
RAB5C-202ENST00000393860 NSD3Q9BZ95 1437 aa26.67■■□□□ 1.86
RAB5C-202ENST00000393860 NLRP13Q86W25 1043 aa26.67■■□□□ 1.86
RAB5C-202ENST00000393860 MED14O60244 1454 aa26.66■■□□□ 1.86
RAB5C-202ENST00000393860 PUS7Q96PZ0 661 aaKnown RBP26.66■■□□□ 1.86
RAB5C-202ENST00000393860 CDK19Q9BWU1 502 aa26.66■■□□□ 1.86
RAB5C-202ENST00000393860 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
RAB5C-202ENST00000393860 TECPR2O15040 1411 aa26.65■■□□□ 1.86
RAB5C-202ENST00000393860 PTPRUQ92729 1446 aa26.63■■□□□ 1.85
RAB5C-202ENST00000393860 ROBO2Q9HCK4 1378 aa26.63■■□□□ 1.85
RAB5C-202ENST00000393860 PNISRQ8TF01 805 aaKnown RBP26.62■■□□□ 1.85
RAB5C-202ENST00000393860 FAM135BQ49AJ0 1406 aa26.61■■□□□ 1.85
RAB5C-202ENST00000393860 ATAD2Q6PL18 1390 aa26.61■■□□□ 1.85
RAB5C-202ENST00000393860 NPC1L1Q9UHC9 1359 aa26.61■■□□□ 1.85
RAB5C-202ENST00000393860 ANKRD36BQ8N2N9 1353 aa26.59■■□□□ 1.85
RAB5C-202ENST00000393860 GTF3C3Q9Y5Q9 886 aa26.59■■□□□ 1.85
RAB5C-202ENST00000393860 PPP2R1AP30153 589 aa26.59■■□□□ 1.85
RAB5C-202ENST00000393860 SETD1BQ9UPS6 1966 aaKnown RBP26.58■■□□□ 1.85
RAB5C-202ENST00000393860 TBX22Q9Y458 520 aa26.57■■□□□ 1.84
RAB5C-202ENST00000393860 DIP2AQ14689 1571 aa26.57■■□□□ 1.84
RAB5C-202ENST00000393860 A0A1W2PP64 1363 aa26.56■■□□□ 1.84
RAB5C-202ENST00000393860 SIRT1Q96EB6 747 aa26.56■■□□□ 1.84
RAB5C-202ENST00000393860 AMOTL2Q9Y2J4 779 aa26.55■■□□□ 1.84
RAB5C-202ENST00000393860 SENP3-EIF4A1A0A087X0R7 540 aa26.55■■□□□ 1.84
RAB5C-202ENST00000393860 NINLQ9Y2I6 1382 aa26.54■■□□□ 1.84
RAB5C-202ENST00000393860 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.54■■□□□ 1.84
RAB5C-202ENST00000393860 USP32Q8NFA0 1604 aa26.54■■□□□ 1.84
RAB5C-202ENST00000393860 WASLO00401 505 aaPredicted RBP26.54■■□□□ 1.84
RAB5C-202ENST00000393860 ANKLE2Q86XL3 938 aa26.53■■□□□ 1.84
RAB5C-202ENST00000393860 CD163L1Q9NR16 1453 aa26.53■■□□□ 1.84
RAB5C-202ENST00000393860 CABP1Q9NZU7 370 aa26.53■■□□□ 1.84
RAB5C-202ENST00000393860 CGNL1Q0VF96 1302 aa26.49■■□□□ 1.83
RAB5C-202ENST00000393860 TNNT2P45379 298 aaPredicted RBP26.48■■□□□ 1.83
RAB5C-202ENST00000393860 TERF2IPQ9NYB0 399 aa26.48■■□□□ 1.83
RAB5C-202ENST00000393860 XRN1Q8IZH2 1706 aaKnown RBP26.48■■□□□ 1.83
RAB5C-202ENST00000393860 NCKAP5LQ9HCH0 1330 aa26.48■■□□□ 1.83
RAB5C-202ENST00000393860 MORC1Q86VD1 984 aa26.47■■□□□ 1.83
RAB5C-202ENST00000393860 ADGRB2O60241 1585 aa26.46■■□□□ 1.83
RAB5C-202ENST00000393860 PPIP5K1Q6PFW1 1433 aa26.45■■□□□ 1.83
RAB5C-202ENST00000393860 HDGFL2Q7Z4V5 671 aaPredicted RBP26.45■■□□□ 1.83
RAB5C-202ENST00000393860 PTCH1Q13635 1447 aa26.45■■□□□ 1.82
RAB5C-202ENST00000393860 NUDT16Q96DE0 195 aaKnown RBP26.45■■□□□ 1.82
RAB5C-202ENST00000393860 ZBED9Q6R2W3 1325 aa26.44■■□□□ 1.82
RAB5C-202ENST00000393860 NUTM2FA1L443 756 aa26.43■■□□□ 1.82
RAB5C-202ENST00000393860 KCNA6P17658 529 aa26.43■■□□□ 1.82
RAB5C-202ENST00000393860 PRR36Q9H6K5 1346 aa26.42■■□□□ 1.82
RAB5C-202ENST00000393860 ATP7BP35670 1465 aa26.42■■□□□ 1.82
RAB5C-202ENST00000393860 NPHP4O75161 1426 aaPredicted RBP26.4■■□□□ 1.82
RAB5C-202ENST00000393860 GGNBP2Q9H3C7 697 aa26.4■■□□□ 1.82
RAB5C-202ENST00000393860 NSD2O96028 1365 aa26.38■■□□□ 1.81
RAB5C-202ENST00000393860 PIK3R4Q99570 1358 aa26.38■■□□□ 1.81
RAB5C-202ENST00000393860 CHD2O14647 1828 aaKnown RBP26.38■■□□□ 1.81
RAB5C-202ENST00000393860 KIF20BQ96Q89 1820 aa26.38■■□□□ 1.81
RAB5C-202ENST00000393860 CCDC61Q9Y6R9 512 aa26.37■■□□□ 1.81
RAB5C-202ENST00000393860 CDC42BPGQ6DT37 1551 aa26.36■■□□□ 1.81
RAB5C-202ENST00000393860 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.36■■□□□ 1.81
RAB5C-202ENST00000393860 ANKRD26Q9UPS8 1709 aa26.36■■□□□ 1.81
RAB5C-202ENST00000393860 FYB1O15117 783 aa26.35■■□□□ 1.81
RAB5C-202ENST00000393860 WDR43Q15061 677 aaKnown RBP eCLIP26.35■■□□□ 1.81
RAB5C-202ENST00000393860 ITSN1Q15811 1721 aa26.35■■□□□ 1.81
RAB5C-202ENST00000393860 ADAMTS8Q9UP79 889 aa26.35■■□□□ 1.81
RAB5C-202ENST00000393860 TOPAZ1Q8N9V7 1692 aa26.34■■□□□ 1.81
RAB5C-202ENST00000393860 CPSF1Q10570 1443 aaKnown RBP26.34■■□□□ 1.81
RAB5C-202ENST00000393860 BLMP54132 1417 aaPredicted RBP26.33■■□□□ 1.81
RAB5C-202ENST00000393860 SALL2Q9Y467 1007 aaPredicted RBP26.33■■□□□ 1.81
RAB5C-202ENST00000393860 AKAP12Q02952 1782 aa26.32■■□□□ 1.8
RAB5C-202ENST00000393860 RBM33Q96EV2 1170 aaKnown RBP26.32■■□□□ 1.8
RAB5C-202ENST00000393860 MON2Q7Z3U7 1717 aa26.31■■□□□ 1.8
RAB5C-202ENST00000393860 KDM4FA0A1W2PPD8 638 aa26.31■■□□□ 1.8
RAB5C-202ENST00000393860 NKTRP30414 1462 aaKnown RBP26.3■■□□□ 1.8
RAB5C-202ENST00000393860 RGPD8O14715 1765 aaPredicted RBP26.29■■□□□ 1.8
RAB5C-202ENST00000393860 MTHFSP49914 203 aa26.29■■□□□ 1.8
RAB5C-202ENST00000393860 EDC4Q6P2E9 1401 aaKnown RBP26.28■■□□□ 1.8
RAB5C-202ENST00000393860 POLR3AO14802 1390 aaPredicted RBP26.28■■□□□ 1.8
RAB5C-202ENST00000393860 NALCNQ8IZF0 1738 aa26.28■■□□□ 1.8
RAB5C-202ENST00000393860 SHPRHQ149N8 1683 aa26.26■■□□□ 1.79
RAB5C-202ENST00000393860 HSPA2P54652 639 aa26.26■■□□□ 1.79
RAB5C-202ENST00000393860 NME9Q86XW9 330 aa26.25■■□□□ 1.79
RAB5C-202ENST00000393860 ACEP12821 1306 aa26.25■■□□□ 1.79
RAB5C-202ENST00000393860 INSRP06213 1382 aa26.24■■□□□ 1.79
RAB5C-202ENST00000393860 ZRANB1Q9UGI0 708 aa26.24■■□□□ 1.79
RAB5C-202ENST00000393860 FMN2Q9NZ56 1722 aa26.23■■□□□ 1.79
RAB5C-202ENST00000393860 CCDC146Q8IYE0 955 aa26.23■■□□□ 1.79
RAB5C-202ENST00000393860 PMFBP1Q8TBY8 1022 aa26.23■■□□□ 1.79
RAB5C-202ENST00000393860 PLEKHG3A1L390 1219 aa26.21■■□□□ 1.79
RAB5C-202ENST00000393860 NRKQ7Z2Y5 1582 aa26.2■■□□□ 1.79
RAB5C-202ENST00000393860 FBLN1P23142 703 aa26.2■■□□□ 1.78
RAB5C-202ENST00000393860 CFAP53Q96M91 514 aa26.2■■□□□ 1.78
RAB5C-202ENST00000393860 ZNF692Q9BU19 519 aaPredicted RBP26.2■■□□□ 1.78
RAB5C-202ENST00000393860 NWD1Q149M9 1564 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms