RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.82
PDZD4-202ENST00000393758 NPM1P06748 294 aaKnown RBP eCLIP20.14■□□□□ 0.81
PDZD4-202ENST00000393758 ASXL1Q8IXJ9 1541 aa20.14■□□□□ 0.81
PDZD4-202ENST00000393758 SCAF11Q99590 1463 aaKnown RBP20.14■□□□□ 0.81
PDZD4-202ENST00000393758 SHANK2Q9UPX8 1470 aa20.14■□□□□ 0.81
PDZD4-202ENST00000393758 POLR1AO95602 1720 aaPredicted RBP20.14■□□□□ 0.81
PDZD4-202ENST00000393758 MINK1Q8N4C8 1332 aaPredicted RBP20.14■□□□□ 0.81
PDZD4-202ENST00000393758 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
PDZD4-202ENST00000393758 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
PDZD4-202ENST00000393758 SSH1Q8WYL5 1049 aa20.13■□□□□ 0.81
PDZD4-202ENST00000393758 HSP90AA2PQ14568 343 aaPredicted RBP20.12■□□□□ 0.81
PDZD4-202ENST00000393758 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
PDZD4-202ENST00000393758 TMEM57Q8N5G2 664 aa20.11■□□□□ 0.81
PDZD4-202ENST00000393758 DDX49Q9Y6V7 483 aaKnown RBP20.11■□□□□ 0.81
PDZD4-202ENST00000393758 KDM5DQ9BY66 1539 aa20.1■□□□□ 0.81
PDZD4-202ENST00000393758 SOX12O15370 315 aa20.1■□□□□ 0.81
PDZD4-202ENST00000393758 HMOX1P09601 288 aa20.1■□□□□ 0.81
PDZD4-202ENST00000393758 MRE11P49959 708 aa20.1■□□□□ 0.81
PDZD4-202ENST00000393758 USP19O94966 1318 aa20.09■□□□□ 0.81
PDZD4-202ENST00000393758 TRIM27P14373 513 aa20.09■□□□□ 0.81
PDZD4-202ENST00000393758 ATF7IPQ6VMQ6 1270 aa20.09■□□□□ 0.81
PDZD4-202ENST00000393758 EVC2Q86UK5 1308 aa20.09■□□□□ 0.81
PDZD4-202ENST00000393758 SCAPERQ9BY12 1400 aa20.08■□□□□ 0.81
PDZD4-202ENST00000393758 STAC3Q96MF2 364 aa20.08■□□□□ 0.81
PDZD4-202ENST00000393758 CEP170Q5SW79 1584 aa20.08■□□□□ 0.81
PDZD4-202ENST00000393758 ABCC10Q5T3U5 1492 aa20.08■□□□□ 0.81
PDZD4-202ENST00000393758 TRMT2AQ8IZ69 625 aaKnown RBP20.08■□□□□ 0.8
PDZD4-202ENST00000393758 GRPEL1Q9HAV7 217 aa20.08■□□□□ 0.8
PDZD4-202ENST00000393758 PIK3C2GO75747 1445 aa20.07■□□□□ 0.8
PDZD4-202ENST00000393758 WDR7Q9Y4E6 1490 aa20.07■□□□□ 0.8
PDZD4-202ENST00000393758 MSNP26038 577 aaKnown RBP20.07■□□□□ 0.8
PDZD4-202ENST00000393758 NINLQ9Y2I6 1382 aa20.06■□□□□ 0.8
PDZD4-202ENST00000393758 NOL8Q76FK4 1167 aaKnown RBP20.06■□□□□ 0.8
PDZD4-202ENST00000393758 THUMPD2Q9BTF0 503 aaKnown RBP20.06■□□□□ 0.8
PDZD4-202ENST00000393758 EIF4G3O43432 1585 aaKnown RBP20.05■□□□□ 0.8
PDZD4-202ENST00000393758 AAMPQ13685 434 aa20.04■□□□□ 0.8
PDZD4-202ENST00000393758 DIAPH1O60610 1272 aaKnown RBP20.04■□□□□ 0.8
PDZD4-202ENST00000393758 FOXD4L6Q3SYB3 417 aaPredicted RBP20.04■□□□□ 0.8
PDZD4-202ENST00000393758 FOXD4L3Q6VB84 417 aaPredicted RBP20.04■□□□□ 0.8
PDZD4-202ENST00000393758 NUP160Q12769 1436 aa20.04■□□□□ 0.8
PDZD4-202ENST00000393758 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
PDZD4-202ENST00000393758 FBLN1P23142 703 aa20.03■□□□□ 0.8
PDZD4-202ENST00000393758 HDGFL2Q7Z4V5 671 aaPredicted RBP20.03■□□□□ 0.8
PDZD4-202ENST00000393758 PTMAP06454 111 aaKnown RBP20.02■□□□□ 0.8
PDZD4-202ENST00000393758 TERF2IPQ9NYB0 399 aa20.02■□□□□ 0.8
PDZD4-202ENST00000393758 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.8
PDZD4-202ENST00000393758 INSRP06213 1382 aa20.01■□□□□ 0.79
PDZD4-202ENST00000393758 CALD1Q05682 793 aaKnown RBP20.01■□□□□ 0.79
PDZD4-202ENST00000393758 ESPNB1AK53 854 aa20■□□□□ 0.79
PDZD4-202ENST00000393758 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
PDZD4-202ENST00000393758 MCTP1Q6DN14 999 aa20■□□□□ 0.79
PDZD4-202ENST00000393758 CHD1LQ86WJ1 897 aa19.99■□□□□ 0.79
PDZD4-202ENST00000393758 PRKAR2BP31323 418 aa19.99■□□□□ 0.79
PDZD4-202ENST00000393758 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
PDZD4-202ENST00000393758 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
PDZD4-202ENST00000393758 TRPM1Q7Z4N2 1603 aa19.98■□□□□ 0.79
PDZD4-202ENST00000393758 CASC1Q6TDU7 716 aa19.98■□□□□ 0.79
PDZD4-202ENST00000393758 PLCB2Q00722 1185 aa19.97■□□□□ 0.79
PDZD4-202ENST00000393758 DNTTIP2Q5QJE6 756 aaKnown RBP19.97■□□□□ 0.79
PDZD4-202ENST00000393758 CHMP4BQ9H444 224 aaKnown RBP19.97■□□□□ 0.79
PDZD4-202ENST00000393758 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
PDZD4-202ENST00000393758 UBE2Q2Q8WVN8 375 aa19.96■□□□□ 0.79
PDZD4-202ENST00000393758 PRDM15P57071 1507 aaPredicted RBP19.96■□□□□ 0.79
PDZD4-202ENST00000393758 ANTXR1Q9H6X2 564 aa19.96■□□□□ 0.79
PDZD4-202ENST00000393758 EIF2AK4Q9P2K8 1649 aaKnown RBP19.96■□□□□ 0.79
PDZD4-202ENST00000393758 VGFO15240 615 aaPredicted RBP19.96■□□□□ 0.79
PDZD4-202ENST00000393758 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
PDZD4-202ENST00000393758 NASPP49321 788 aaPredicted RBP19.95■□□□□ 0.78
PDZD4-202ENST00000393758 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.78
PDZD4-202ENST00000393758 SLC4A10Q6U841 1118 aa19.95■□□□□ 0.78
PDZD4-202ENST00000393758 NOS1P29475 1434 aa19.95■□□□□ 0.78
PDZD4-202ENST00000393758 SAMD9LQ8IVG5 1584 aa19.95■□□□□ 0.78
PDZD4-202ENST00000393758 CAVIN1Q6NZI2 390 aaKnown RBP19.94■□□□□ 0.78
PDZD4-202ENST00000393758 SSFA2P28290 1259 aa19.94■□□□□ 0.78
PDZD4-202ENST00000393758 SKOR2Q2VWA4 1001 aaPredicted RBP19.94■□□□□ 0.78
PDZD4-202ENST00000393758 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
PDZD4-202ENST00000393758 NUTM2FA1L443 756 aa19.93■□□□□ 0.78
PDZD4-202ENST00000393758 K7ELQ4 463 aaPredicted RBP19.91■□□□□ 0.78
PDZD4-202ENST00000393758 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
PDZD4-202ENST00000393758 PRAM1Q96QH2 718 aa19.9■□□□□ 0.78
PDZD4-202ENST00000393758 CROCC2H7BZ55 1655 aa19.9■□□□□ 0.78
PDZD4-202ENST00000393758 MLECQ14165 292 aa19.89■□□□□ 0.78
PDZD4-202ENST00000393758 RBM10P98175 930 aaKnown RBP19.89■□□□□ 0.77
PDZD4-202ENST00000393758 RNF214Q8ND24 703 aa19.89■□□□□ 0.77
PDZD4-202ENST00000393758 CABP1Q9NZU7 370 aa19.89■□□□□ 0.77
PDZD4-202ENST00000393758 NPC1L1Q9UHC9 1359 aa19.88■□□□□ 0.77
PDZD4-202ENST00000393758 MPNDQ8N594 471 aa19.88■□□□□ 0.77
PDZD4-202ENST00000393758 FAM13BQ9NYF5 915 aa19.88■□□□□ 0.77
PDZD4-202ENST00000393758 CDC45O75419 566 aa19.88■□□□□ 0.77
PDZD4-202ENST00000393758 HDAC1Q13547 482 aaPredicted RBP19.87■□□□□ 0.77
PDZD4-202ENST00000393758 TBC1D9Q6ZT07 1266 aa19.87■□□□□ 0.77
PDZD4-202ENST00000393758 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
PDZD4-202ENST00000393758 PRPF40AO75400 957 aaKnown RBP19.87■□□□□ 0.77
PDZD4-202ENST00000393758 DCTN1Q14203 1278 aa19.87■□□□□ 0.77
PDZD4-202ENST00000393758 PTMSP20962 102 aa19.86■□□□□ 0.77
PDZD4-202ENST00000393758 CLCN1P35523 988 aa19.86■□□□□ 0.77
PDZD4-202ENST00000393758 ABCA8O94911 1581 aa19.86■□□□□ 0.77
PDZD4-202ENST00000393758 ADCY10Q96PN6 1610 aa19.85■□□□□ 0.77
PDZD4-202ENST00000393758 TWISTNBQ3B726 338 aaPredicted RBP19.85■□□□□ 0.77
PDZD4-202ENST00000393758 R3HCC1Q9Y3T6 440 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms