RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 WAPLQ7Z5K2 1190 aa27.07■■□□□ 1.92
PDLIM7-205ENST00000393551 KNDC1Q76NI1 1749 aa27.07■■□□□ 1.92
PDLIM7-205ENST00000393551 CDC42BPGQ6DT37 1551 aa27.06■■□□□ 1.92
PDLIM7-205ENST00000393551 ABCC11Q96J66 1382 aa27.06■■□□□ 1.92
PDLIM7-205ENST00000393551 NRXN1Q9ULB1 1477 aa27.06■■□□□ 1.92
PDLIM7-205ENST00000393551 PLEKHH1Q9ULM0 1364 aa27.05■■□□□ 1.92
PDLIM7-205ENST00000393551 SOS2Q07890 1332 aaPredicted RBP27.04■■□□□ 1.92
PDLIM7-205ENST00000393551 YTHDC2Q9H6S0 1430 aaKnown RBP27.02■■□□□ 1.92
PDLIM7-205ENST00000393551 ZNF772Q68DY9 489 aaPredicted RBP27.02■■□□□ 1.92
PDLIM7-205ENST00000393551 C14orf93Q9H972 538 aaKnown RBP27.02■■□□□ 1.92
PDLIM7-205ENST00000393551 MYOM2P54296 1465 aa27.01■■□□□ 1.91
PDLIM7-205ENST00000393551 CFAP70Q5T0N1 1121 aa26.98■■□□□ 1.91
PDLIM7-205ENST00000393551 AFF2P51816 1311 aa26.96■■□□□ 1.91
PDLIM7-205ENST00000393551 ESCO1Q5FWF5 840 aa26.96■■□□□ 1.91
PDLIM7-205ENST00000393551 FMN2Q9NZ56 1722 aa26.95■■□□□ 1.9
PDLIM7-205ENST00000393551 NUTM2FA1L443 756 aa26.94■■□□□ 1.9
PDLIM7-205ENST00000393551 PXDNQ92626 1479 aa26.93■■□□□ 1.9
PDLIM7-205ENST00000393551 SIRT1Q96EB6 747 aa26.93■■□□□ 1.9
PDLIM7-205ENST00000393551 C8orf37Q96NL8 207 aa26.92■■□□□ 1.9
PDLIM7-205ENST00000393551 COL22A1Q8NFW1 1626 aaPredicted RBP26.91■■□□□ 1.9
PDLIM7-205ENST00000393551 HRCP23327 699 aa26.91■■□□□ 1.9
PDLIM7-205ENST00000393551 FOXO3O43524 673 aa26.9■■□□□ 1.9
PDLIM7-205ENST00000393551 NPHP3Q7Z494 1330 aa26.9■■□□□ 1.9
PDLIM7-205ENST00000393551 DHX57Q6P158 1386 aaKnown RBP26.89■■□□□ 1.9
PDLIM7-205ENST00000393551 ADAMTS2O95450 1211 aa26.89■■□□□ 1.9
PDLIM7-205ENST00000393551 RXRBP28702 533 aa26.89■■□□□ 1.9
PDLIM7-205ENST00000393551 XPCQ01831 940 aaPredicted RBP26.89■■□□□ 1.9
PDLIM7-205ENST00000393551 RGPD8O14715 1765 aaPredicted RBP26.89■■□□□ 1.89
PDLIM7-205ENST00000393551 ADGRB1O14514 1584 aa26.88■■□□□ 1.89
PDLIM7-205ENST00000393551 PRAM1Q96QH2 718 aa26.84■■□□□ 1.89
PDLIM7-205ENST00000393551 CDK12Q9NYV4 1490 aaPredicted RBP26.84■■□□□ 1.89
PDLIM7-205ENST00000393551 DLC1Q96QB1 1528 aa26.84■■□□□ 1.89
PDLIM7-205ENST00000393551 NGLY1Q96IV0 654 aa26.83■■□□□ 1.89
PDLIM7-205ENST00000393551 QTRT2Q9H974 415 aaKnown RBP26.83■■□□□ 1.89
PDLIM7-205ENST00000393551 SAFB2Q14151 953 aaKnown RBP eCLIP26.82■■□□□ 1.88
PDLIM7-205ENST00000393551 DCAF11Q8TEB1 546 aa26.82■■□□□ 1.88
PDLIM7-205ENST00000393551 KDM2AQ9Y2K7 1162 aa26.82■■□□□ 1.88
PDLIM7-205ENST00000393551 KIF1AQ12756 1690 aa26.82■■□□□ 1.88
PDLIM7-205ENST00000393551 MARF1Q9Y4F3 1742 aaKnown RBP26.79■■□□□ 1.88
PDLIM7-205ENST00000393551 FNBP4Q8N3X1 1017 aaPredicted RBP26.78■■□□□ 1.88
PDLIM7-205ENST00000393551 USP32Q8NFA0 1604 aa26.78■■□□□ 1.88
PDLIM7-205ENST00000393551 RGS12O14924 1447 aa26.77■■□□□ 1.88
PDLIM7-205ENST00000393551 RBM6P78332 1123 aaKnown RBP26.77■■□□□ 1.88
PDLIM7-205ENST00000393551 UPF1Q92900 1129 aaKnown RBP eCLIP26.77■■□□□ 1.88
PDLIM7-205ENST00000393551 SPATA31A3Q5VYP0 1347 aa26.76■■□□□ 1.87
PDLIM7-205ENST00000393551 TRAK1Q9UPV9 953 aa26.76■■□□□ 1.87
PDLIM7-205ENST00000393551 ADGRB2O60241 1585 aa26.75■■□□□ 1.87
PDLIM7-205ENST00000393551 USP21Q9UK80 565 aa26.75■■□□□ 1.87
PDLIM7-205ENST00000393551 KRT28Q7Z3Y7 464 aa26.74■■□□□ 1.87
PDLIM7-205ENST00000393551 POGKQ9P215 609 aa26.74■■□□□ 1.87
PDLIM7-205ENST00000393551 PHF8Q9UPP1 1060 aa26.74■■□□□ 1.87
PDLIM7-205ENST00000393551 STAC3Q96MF2 364 aa26.72■■□□□ 1.87
PDLIM7-205ENST00000393551 BCL9LQ86UU0 1499 aa26.72■■□□□ 1.87
PDLIM7-205ENST00000393551 HIRIP3Q9BW71 556 aaPredicted RBP26.7■■□□□ 1.86
PDLIM7-205ENST00000393551 ATRNO75882 1429 aa26.7■■□□□ 1.86
PDLIM7-205ENST00000393551 ANKARQ7Z5J8 1434 aa26.68■■□□□ 1.86
PDLIM7-205ENST00000393551 TRPC5Q9UL62 973 aaPredicted RBP26.68■■□□□ 1.86
PDLIM7-205ENST00000393551 MINK1Q8N4C8 1332 aaPredicted RBP26.67■■□□□ 1.86
PDLIM7-205ENST00000393551 ARHGEF28Q8N1W1 1705 aaKnown RBP26.67■■□□□ 1.86
PDLIM7-205ENST00000393551 PRR36Q9H6K5 1346 aa26.66■■□□□ 1.86
PDLIM7-205ENST00000393551 TNS3Q68CZ2 1445 aa26.66■■□□□ 1.86
PDLIM7-205ENST00000393551 PMFBP1Q8TBY8 1022 aa26.66■■□□□ 1.86
PDLIM7-205ENST00000393551 EP400Q96L91 3159 aa26.64■■□□□ 1.86
PDLIM7-205ENST00000393551 SBNO1A3KN83 1393 aa26.63■■□□□ 1.85
PDLIM7-205ENST00000393551 CABLES1Q8TDN4 633 aa26.63■■□□□ 1.85
PDLIM7-205ENST00000393551 ABCA3Q99758 1704 aa26.62■■□□□ 1.85
PDLIM7-205ENST00000393551 TRPM3Q9HCF6 1732 aaPredicted RBP26.62■■□□□ 1.85
PDLIM7-205ENST00000393551 SLIT2O94813 1529 aa26.62■■□□□ 1.85
PDLIM7-205ENST00000393551 PSME1Q06323 249 aa26.62■■□□□ 1.85
PDLIM7-205ENST00000393551 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.62■■□□□ 1.85
PDLIM7-205ENST00000393551 TULP4Q9NRJ4 1543 aa26.61■■□□□ 1.85
PDLIM7-205ENST00000393551 WASLO00401 505 aaPredicted RBP26.61■■□□□ 1.85
PDLIM7-205ENST00000393551 KIAA1210Q9ULL0 1709 aa26.59■■□□□ 1.85
PDLIM7-205ENST00000393551 UNC5CLQ8IV45 518 aa26.56■■□□□ 1.84
PDLIM7-205ENST00000393551 GJD4Q96KN9 370 aaPredicted RBP26.56■■□□□ 1.84
PDLIM7-205ENST00000393551 ALS2Q96Q42 1657 aa26.56■■□□□ 1.84
PDLIM7-205ENST00000393551 GLI3P10071 1580 aa26.55■■□□□ 1.84
PDLIM7-205ENST00000393551 PLEKHG5O94827 1062 aa26.55■■□□□ 1.84
PDLIM7-205ENST00000393551 NBPF1Q3BBV0 1214 aa26.55■■□□□ 1.84
PDLIM7-205ENST00000393551 ARHGEF10O15013 1369 aa26.55■■□□□ 1.84
PDLIM7-205ENST00000393551 EIF3AQ14152 1382 aaKnown RBP26.55■■□□□ 1.84
PDLIM7-205ENST00000393551 LMOD2Q6P5Q4 547 aa26.54■■□□□ 1.84
PDLIM7-205ENST00000393551 ATP7BP35670 1465 aa26.54■■□□□ 1.84
PDLIM7-205ENST00000393551 PLCH1Q4KWH8 1693 aa26.53■■□□□ 1.84
PDLIM7-205ENST00000393551 RALGAPBQ86X10 1494 aa26.52■■□□□ 1.84
PDLIM7-205ENST00000393551 ITSN1Q15811 1721 aa26.5■■□□□ 1.83
PDLIM7-205ENST00000393551 GPRASP1Q5JY77 1395 aa26.49■■□□□ 1.83
PDLIM7-205ENST00000393551 ATAD2Q6PL18 1390 aa26.49■■□□□ 1.83
PDLIM7-205ENST00000393551 NWD2Q9ULI1 1742 aa26.49■■□□□ 1.83
PDLIM7-205ENST00000393551 HAP1P54257 671 aaPredicted RBP26.49■■□□□ 1.83
PDLIM7-205ENST00000393551 NUDT16Q96DE0 195 aaKnown RBP26.49■■□□□ 1.83
PDLIM7-205ENST00000393551 CRYBG1Q9Y4K1 1723 aa26.48■■□□□ 1.83
PDLIM7-205ENST00000393551 FAM83GA6ND36 823 aa26.48■■□□□ 1.83
PDLIM7-205ENST00000393551 CDK19Q9BWU1 502 aa26.48■■□□□ 1.83
PDLIM7-205ENST00000393551 NGDNQ8NEJ9 315 aaKnown RBP26.46■■□□□ 1.83
PDLIM7-205ENST00000393551 TOPAZ1Q8N9V7 1692 aa26.46■■□□□ 1.83
PDLIM7-205ENST00000393551 BRWD3Q6RI45 1802 aa26.45■■□□□ 1.82
PDLIM7-205ENST00000393551 SIN3AQ96ST3 1273 aa26.45■■□□□ 1.82
PDLIM7-205ENST00000393551 L3MBTL2Q969R5 705 aa26.44■■□□□ 1.82
PDLIM7-205ENST00000393551 NRAPQ86VF7 1730 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms