RNA–Protein interactions for RNA: ENST00000393543.7

MDM1-203, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best) BASIC

Gene MDM1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-203ENST00000393543 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.32
MDM1-203ENST00000393543 SAMD9LQ8IVG5 1584 aa17.08■□□□□ 0.32
MDM1-203ENST00000393543 PREX2Q70Z35 1606 aa17.08■□□□□ 0.32
MDM1-203ENST00000393543 BECN1Q14457 450 aa17.08■□□□□ 0.32
MDM1-203ENST00000393543 L1TD1Q5T7N2 865 aaKnown RBP17.08■□□□□ 0.32
MDM1-203ENST00000393543 CDC42BPBQ9Y5S2 1711 aa17.07■□□□□ 0.32
MDM1-203ENST00000393543 MAPK8IP3Q9UPT6 1336 aa17.07■□□□□ 0.32
MDM1-203ENST00000393543 ZMYM3Q14202 1370 aa17.07■□□□□ 0.32
MDM1-203ENST00000393543 ATP10BO94823 1461 aa17.07■□□□□ 0.32
MDM1-203ENST00000393543 VGFO15240 615 aaPredicted RBP17.06■□□□□ 0.32
MDM1-203ENST00000393543 NGEFQ8N5V2 710 aa17.06■□□□□ 0.32
MDM1-203ENST00000393543 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
MDM1-203ENST00000393543 ASXL1Q8IXJ9 1541 aa17.06■□□□□ 0.32
MDM1-203ENST00000393543 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
MDM1-203ENST00000393543 WWC1Q8IX03 1113 aa17.06■□□□□ 0.32
MDM1-203ENST00000393543 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
MDM1-203ENST00000393543 AMER1Q5JTC6 1135 aaPredicted RBP17.05■□□□□ 0.32
MDM1-203ENST00000393543 CGNL1Q0VF96 1302 aa17.05■□□□□ 0.32
MDM1-203ENST00000393543 DMTNQ08495 405 aa17.05■□□□□ 0.32
MDM1-203ENST00000393543 JPH4Q96JJ6 628 aa17.05■□□□□ 0.32
MDM1-203ENST00000393543 KNSTRNQ9Y448 316 aa17.04■□□□□ 0.32
MDM1-203ENST00000393543 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
MDM1-203ENST00000393543 PRDM10Q9NQV6 1147 aa17.03■□□□□ 0.32
MDM1-203ENST00000393543 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
MDM1-203ENST00000393543 MYOM1P52179 1685 aa17.02■□□□□ 0.32
MDM1-203ENST00000393543 HNRNPMP52272 730 aaKnown RBP eCLIP17.02■□□□□ 0.32
MDM1-203ENST00000393543 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
MDM1-203ENST00000393543 MADDQ8WXG6 1647 aa17.02■□□□□ 0.32
MDM1-203ENST00000393543 E9PSI1 815 aa17.01■□□□□ 0.31
MDM1-203ENST00000393543 IRX3P78415 501 aaPredicted RBP17.01■□□□□ 0.31
MDM1-203ENST00000393543 CDCA8Q53HL2 280 aa17.01■□□□□ 0.31
MDM1-203ENST00000393543 POGKQ9P215 609 aa17.01■□□□□ 0.31
MDM1-203ENST00000393543 FBXO3Q9UK99 471 aa17.01■□□□□ 0.31
MDM1-203ENST00000393543 ANTXR1Q9H6X2 564 aa17.01■□□□□ 0.31
MDM1-203ENST00000393543 PPRC1Q5VV67 1664 aaKnown RBP17.01■□□□□ 0.31
MDM1-203ENST00000393543 IGHDP01880 384 aa17■□□□□ 0.31
MDM1-203ENST00000393543 ANP32BQ92688 251 aaKnown RBP16.98■□□□□ 0.31
MDM1-203ENST00000393543 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
MDM1-203ENST00000393543 SLC52A1Q9NWF4 448 aa16.98■□□□□ 0.31
MDM1-203ENST00000393543 SPHKAPQ2M3C7 1700 aa16.98■□□□□ 0.31
MDM1-203ENST00000393543 SCAPERQ9BY12 1400 aa16.98■□□□□ 0.31
MDM1-203ENST00000393543 FBXO41Q8TF61 875 aa16.98■□□□□ 0.31
MDM1-203ENST00000393543 MMP14P50281 582 aa16.97■□□□□ 0.31
MDM1-203ENST00000393543 CLUAP1Q96AJ1 413 aa16.97■□□□□ 0.31
MDM1-203ENST00000393543 MAP7D2Q96T17 732 aa16.97■□□□□ 0.31
MDM1-203ENST00000393543 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
MDM1-203ENST00000393543 KDM5AP29375 1690 aaKnown RBP16.96■□□□□ 0.31
MDM1-203ENST00000393543 BCAR3O75815 825 aa16.96■□□□□ 0.3
MDM1-203ENST00000393543 SEC24BO95487 1268 aa16.95■□□□□ 0.3
MDM1-203ENST00000393543 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
MDM1-203ENST00000393543 SCAF11Q99590 1463 aaKnown RBP16.95■□□□□ 0.3
MDM1-203ENST00000393543 KIAA1210Q9ULL0 1709 aa16.95■□□□□ 0.3
MDM1-203ENST00000393543 SYCP2Q9BX26 1530 aa16.93■□□□□ 0.3
MDM1-203ENST00000393543 FSD2A1L4K1 749 aa16.93■□□□□ 0.3
MDM1-203ENST00000393543 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
MDM1-203ENST00000393543 CEP152O94986 1710 aa16.93■□□□□ 0.3
MDM1-203ENST00000393543 ZSCAN20P17040 1043 aaPredicted RBP16.93■□□□□ 0.3
MDM1-203ENST00000393543 UHRF1BP1LA0JNW5 1464 aa16.93■□□□□ 0.3
MDM1-203ENST00000393543 APAF1O14727 1248 aa16.92■□□□□ 0.3
MDM1-203ENST00000393543 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
MDM1-203ENST00000393543 PMFBP1Q8TBY8 1022 aa16.92■□□□□ 0.3
MDM1-203ENST00000393543 UPF2Q9HAU5 1272 aaKnown RBP16.92■□□□□ 0.3
MDM1-203ENST00000393543 TTC37Q6PGP7 1564 aa16.92■□□□□ 0.3
MDM1-203ENST00000393543 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
MDM1-203ENST00000393543 MAP3K4Q9Y6R4 1608 aa16.91■□□□□ 0.3
MDM1-203ENST00000393543 RIPK4P57078 832 aa16.9■□□□□ 0.3
MDM1-203ENST00000393543 HDAC5Q9UQL6 1122 aa16.9■□□□□ 0.3
MDM1-203ENST00000393543 KIF20AO95235 890 aa16.9■□□□□ 0.3
MDM1-203ENST00000393543 CCDC146Q8IYE0 955 aa16.9■□□□□ 0.3
MDM1-203ENST00000393543 SLKQ9H2G2 1235 aaPredicted RBP16.9■□□□□ 0.3
MDM1-203ENST00000393543 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
MDM1-203ENST00000393543 TBC1D2Q9BYX2 928 aa16.89■□□□□ 0.29
MDM1-203ENST00000393543 CLGNO14967 610 aa16.88■□□□□ 0.29
MDM1-203ENST00000393543 ZBTB22O15209 634 aa16.88■□□□□ 0.29
MDM1-203ENST00000393543 XRCC6P12956 609 aaKnown RBP eCLIP16.88■□□□□ 0.29
MDM1-203ENST00000393543 FAM193AP78312 1265 aa16.87■□□□□ 0.29
MDM1-203ENST00000393543 TRPM2O94759 1503 aa16.87■□□□□ 0.29
MDM1-203ENST00000393543 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
MDM1-203ENST00000393543 PSEN1P49768 467 aa16.87■□□□□ 0.29
MDM1-203ENST00000393543 POLR3AO14802 1390 aaPredicted RBP16.86■□□□□ 0.29
MDM1-203ENST00000393543 MCM4P33991 863 aa16.86■□□□□ 0.29
MDM1-203ENST00000393543 DNTTIP2Q5QJE6 756 aaKnown RBP16.86■□□□□ 0.29
MDM1-203ENST00000393543 COG6Q9Y2V7 657 aa16.86■□□□□ 0.29
MDM1-203ENST00000393543 NEURL4Q96JN8 1562 aa16.86■□□□□ 0.29
MDM1-203ENST00000393543 TNNT2P45379 298 aaPredicted RBP16.85■□□□□ 0.29
MDM1-203ENST00000393543 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
MDM1-203ENST00000393543 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
MDM1-203ENST00000393543 ARHGAP5Q13017 1502 aa16.85■□□□□ 0.29
MDM1-203ENST00000393543 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
MDM1-203ENST00000393543 PANK1Q8TE04 598 aa16.84■□□□□ 0.29
MDM1-203ENST00000393543 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
MDM1-203ENST00000393543 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
MDM1-203ENST00000393543 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.29
MDM1-203ENST00000393543 CERS3Q8IU89 383 aa16.83■□□□□ 0.29
MDM1-203ENST00000393543 ESPNB1AK53 854 aa16.83■□□□□ 0.28
MDM1-203ENST00000393543 CHMP5Q9NZZ3 219 aa16.83■□□□□ 0.28
MDM1-203ENST00000393543 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
MDM1-203ENST00000393543 MRE11P49959 708 aa16.82■□□□□ 0.28
MDM1-203ENST00000393543 FAM43BQ6ZT52 329 aaPredicted RBP16.82■□□□□ 0.28
MDM1-203ENST00000393543 FAM13BQ9NYF5 915 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms