RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 PPP1R3GB7ZBB8 358 aa8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 MYT1LQ9UL68 1186 aa8.44□□□□□ -1.06
TSPAN8-202ENST00000393330 CARMIL1Q5VZK9 1371 aa8.43□□□□□ -1.06
TSPAN8-202ENST00000393330 FRMPD1Q5SYB0 1578 aa8.43□□□□□ -1.06
TSPAN8-202ENST00000393330 BIVM-ERCC5R4GMW8 1640 aa8.43□□□□□ -1.06
TSPAN8-202ENST00000393330 ESF1Q9H501 851 aaKnown RBP8.43□□□□□ -1.06
TSPAN8-202ENST00000393330 EFCAB5A4FU69 1503 aa8.42□□□□□ -1.06
TSPAN8-202ENST00000393330 FER1L4A9Z1Z3 1794 aa8.42□□□□□ -1.06
TSPAN8-202ENST00000393330 PROX2Q3B8N5 592 aa8.42□□□□□ -1.06
TSPAN8-202ENST00000393330 SLC4A5Q9BY07 1137 aa8.41□□□□□ -1.06
TSPAN8-202ENST00000393330 ZFYVE16Q7Z3T8 1539 aa8.41□□□□□ -1.06
TSPAN8-202ENST00000393330 KIF27Q86VH2 1401 aa8.41□□□□□ -1.06
TSPAN8-202ENST00000393330 HRO43593 1189 aa8.4□□□□□ -1.06
TSPAN8-202ENST00000393330 ABCA9Q8IUA7 1624 aa8.4□□□□□ -1.07
TSPAN8-202ENST00000393330 UGGT2Q9NYU1 1516 aa8.4□□□□□ -1.07
TSPAN8-202ENST00000393330 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
TSPAN8-202ENST00000393330 RNF166Q96A37 237 aaPredicted RBP8.39□□□□□ -1.07
TSPAN8-202ENST00000393330 ARXQ96QS3 562 aa8.39□□□□□ -1.07
TSPAN8-202ENST00000393330 ATP10AO60312 1499 aa8.39□□□□□ -1.07
TSPAN8-202ENST00000393330 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
TSPAN8-202ENST00000393330 KIAA0556O60303 1618 aa8.38□□□□□ -1.07
TSPAN8-202ENST00000393330 CPS1P31327 1500 aa8.37□□□□□ -1.07
TSPAN8-202ENST00000393330 ZMYM4Q5VZL5 1548 aa8.37□□□□□ -1.07
TSPAN8-202ENST00000393330 C9orf84Q5VXU9 1444 aa8.37□□□□□ -1.07
TSPAN8-202ENST00000393330 KIAA1468Q9P260 1216 aa8.37□□□□□ -1.07
TSPAN8-202ENST00000393330 CAMSAP1Q5T5Y3 1602 aa8.36□□□□□ -1.07
TSPAN8-202ENST00000393330 TESPA1A2RU30 521 aaPredicted RBP8.36□□□□□ -1.07
TSPAN8-202ENST00000393330 SMYD5Q6GMV2 418 aa8.36□□□□□ -1.07
TSPAN8-202ENST00000393330 SRCAPQ6ZRS2 3230 aa8.36□□□□□ -1.07
TSPAN8-202ENST00000393330 PLA2R1Q13018 1463 aa8.35□□□□□ -1.07
TSPAN8-202ENST00000393330 NUTM2FA1L443 756 aa8.35□□□□□ -1.07
TSPAN8-202ENST00000393330 TRIM6-TRIM34B2RNG4 842 aa8.35□□□□□ -1.07
TSPAN8-202ENST00000393330 BHMG1C9JSJ3 638 aaPredicted RBP8.35□□□□□ -1.07
TSPAN8-202ENST00000393330 MRPL50Q8N5N7 158 aaKnown RBP8.35□□□□□ -1.07
TSPAN8-202ENST00000393330 RABGEF1Q9UJ41 708 aa8.35□□□□□ -1.07
TSPAN8-202ENST00000393330 ABCA8O94911 1581 aa8.35□□□□□ -1.07
TSPAN8-202ENST00000393330 GOLGA8CPA6NN73 597 aa8.34□□□□□ -1.07
TSPAN8-202ENST00000393330 CDCA7LQ96GN5 454 aa8.34□□□□□ -1.07
TSPAN8-202ENST00000393330 NBPF3Q9H094 633 aa8.34□□□□□ -1.07
TSPAN8-202ENST00000393330 ATP10BO94823 1461 aa8.34□□□□□ -1.07
TSPAN8-202ENST00000393330 SUPT5HO00267 1087 aaKnown RBP8.34□□□□□ -1.08
TSPAN8-202ENST00000393330 PRSS12P56730 875 aa8.34□□□□□ -1.08
TSPAN8-202ENST00000393330 TSKSQ9UJT2 592 aa8.34□□□□□ -1.08
TSPAN8-202ENST00000393330 GOLGA3Q08378 1498 aa8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 ARID3CA6NKF2 412 aa8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 RBM26Q5T8P6 1007 aaKnown RBP8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 PACS2Q86VP3 889 aa8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 KCTD12Q96CX2 325 aaKnown RBP8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 NPDC1Q9NQX5 325 aaPredicted RBP8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 NPATQ14207 1427 aa8.33□□□□□ -1.08
TSPAN8-202ENST00000393330 RICTORQ6R327 1708 aa8.32□□□□□ -1.08
TSPAN8-202ENST00000393330 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
TSPAN8-202ENST00000393330 CNTLNQ9NXG0 1405 aa8.32□□□□□ -1.08
TSPAN8-202ENST00000393330 TCOF1Q13428 1488 aaKnown RBP8.32□□□□□ -1.08
TSPAN8-202ENST00000393330 SHANK2Q9UPX8 1470 aa8.32□□□□□ -1.08
TSPAN8-202ENST00000393330 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
TSPAN8-202ENST00000393330 GTF3C3Q9Y5Q9 886 aa8.31□□□□□ -1.08
TSPAN8-202ENST00000393330 SIGLEC1Q9BZZ2 1709 aa8.31□□□□□ -1.08
TSPAN8-202ENST00000393330 SMAPO00193 183 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 FAM198AQ9UFP1 575 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 HECW1Q76N89 1606 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 SCAPERQ9BY12 1400 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 PLEKHD1A6NEE1 506 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 PTGDRQ13258 359 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 ZNF772Q68DY9 489 aaPredicted RBP8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 PADI6Q6TGC4 694 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 WNT2BQ93097 391 aa8.29□□□□□ -1.08
TSPAN8-202ENST00000393330 CFAP74Q9C0B2 1584 aa8.28□□□□□ -1.08
TSPAN8-202ENST00000393330 PNMA3Q9UL41 463 aa8.28□□□□□ -1.08
TSPAN8-202ENST00000393330 PTPN5P54829 565 aa8.27□□□□□ -1.09
TSPAN8-202ENST00000393330 LAPTM4BQ86VI4 370 aa8.27□□□□□ -1.09
TSPAN8-202ENST00000393330 TATDN2Q93075 761 aa8.27□□□□□ -1.09
TSPAN8-202ENST00000393330 TRIM52Q96A61 297 aa8.27□□□□□ -1.09
TSPAN8-202ENST00000393330 C3orf80F5H4A9 247 aa8.26□□□□□ -1.09
TSPAN8-202ENST00000393330 FCHSD2O94868 740 aa8.26□□□□□ -1.09
TSPAN8-202ENST00000393330 NUDT18Q6ZVK8 323 aa8.26□□□□□ -1.09
TSPAN8-202ENST00000393330 AGLP35573 1532 aa8.26□□□□□ -1.09
TSPAN8-202ENST00000393330 RXRBP28702 533 aa8.25□□□□□ -1.09
TSPAN8-202ENST00000393330 ZFRQ96KR1 1074 aaKnown RBP8.25□□□□□ -1.09
TSPAN8-202ENST00000393330 RBM27Q9P2N5 1060 aaKnown RBP8.25□□□□□ -1.09
TSPAN8-202ENST00000393330 ZMYM3Q14202 1370 aa8.25□□□□□ -1.09
TSPAN8-202ENST00000393330 C3P01024 1663 aa8.25□□□□□ -1.09
TSPAN8-202ENST00000393330 ALKQ9UM73 1620 aa8.25□□□□□ -1.09
TSPAN8-202ENST00000393330 NBPF26B4DH59 902 aa8.24□□□□□ -1.09
TSPAN8-202ENST00000393330 FAM98CQ17RN3 349 aaKnown RBP8.24□□□□□ -1.09
TSPAN8-202ENST00000393330 ANKK1Q8NFD2 765 aa8.24□□□□□ -1.09
TSPAN8-202ENST00000393330 HCSTQ9UBK5 93 aa8.24□□□□□ -1.09
TSPAN8-202ENST00000393330 SETD1AO15047 1707 aaKnown RBP8.24□□□□□ -1.09
TSPAN8-202ENST00000393330 THSD4Q6ZMP0 1018 aa8.24□□□□□ -1.09
TSPAN8-202ENST00000393330 TTC13Q8NBP0 860 aa8.24□□□□□ -1.09
TSPAN8-202ENST00000393330 FAM135BQ49AJ0 1406 aa8.23□□□□□ -1.09
TSPAN8-202ENST00000393330 EFCAB2Q5VUJ9 269 aa8.23□□□□□ -1.09
TSPAN8-202ENST00000393330 ANKLE2Q86XL3 938 aa8.23□□□□□ -1.09
TSPAN8-202ENST00000393330 GPIHBP1Q8IV16 184 aa8.23□□□□□ -1.09
TSPAN8-202ENST00000393330 BCAMP50895 628 aa8.22□□□□□ -1.09
TSPAN8-202ENST00000393330 FAM161AQ3B820 660 aa8.22□□□□□ -1.09
TSPAN8-202ENST00000393330 HIC1Q14526 733 aa8.21□□□□□ -1.1
TSPAN8-202ENST00000393330 CDK12Q9NYV4 1490 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms