RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 MORC1Q86VD1 984 aa33.9■■■■□ 3.02
SMARCD3-203ENST00000392811 ALKQ9UM73 1620 aa33.89■■■■□ 3.02
SMARCD3-203ENST00000392811 CABP2Q9NPB3 220 aa33.89■■■■□ 3.02
SMARCD3-203ENST00000392811 YTHDC2Q9H6S0 1430 aaKnown RBP33.89■■■■□ 3.02
SMARCD3-203ENST00000392811 CCDC136Q96JN2 1154 aa33.89■■■■□ 3.02
SMARCD3-203ENST00000392811 ZNF521Q96K83 1311 aa33.89■■■■□ 3.02
SMARCD3-203ENST00000392811 POLR3AO14802 1390 aaPredicted RBP33.88■■■■□ 3.01
SMARCD3-203ENST00000392811 ANKRD36BQ8N2N9 1353 aa33.87■■■■□ 3.01
SMARCD3-203ENST00000392811 CCDC146Q8IYE0 955 aa33.87■■■■□ 3.01
SMARCD3-203ENST00000392811 A2ML1A8K2U0 1454 aa33.86■■■■□ 3.01
SMARCD3-203ENST00000392811 CGNL1Q0VF96 1302 aa33.85■■■■□ 3.01
SMARCD3-203ENST00000392811 PRAM1Q96QH2 718 aa33.82■■■■□ 3.01
SMARCD3-203ENST00000392811 TNNT2P45379 298 aaPredicted RBP33.8■■■■□ 3
SMARCD3-203ENST00000392811 GOLGA2Q08379 1002 aa33.8■■■■□ 3
SMARCD3-203ENST00000392811 EXOC6Q8TAG9 804 aa33.8■■■■□ 3
SMARCD3-203ENST00000392811 APAF1O14727 1248 aa33.79■■■■□ 3
SMARCD3-203ENST00000392811 SRPK2P78362 688 aaKnown RBP33.79■■■■□ 3
SMARCD3-203ENST00000392811 DUSP27Q5VZP5 1158 aa33.79■■■■□ 3
SMARCD3-203ENST00000392811 POGKQ9P215 609 aa33.79■■■■□ 3
SMARCD3-203ENST00000392811 SHPRHQ149N8 1683 aa33.78■■■■□ 3
SMARCD3-203ENST00000392811 MINK1Q8N4C8 1332 aaPredicted RBP33.78■■■■□ 3
SMARCD3-203ENST00000392811 NINLQ9Y2I6 1382 aa33.78■■■■□ 3
SMARCD3-203ENST00000392811 RIMS2Q9UQ26 1411 aa33.78■■■■□ 3
SMARCD3-203ENST00000392811 NSD2O96028 1365 aa33.76■■■■□ 3
SMARCD3-203ENST00000392811 A0A1W2PP64 1363 aa33.73■■■□□ 2.99
SMARCD3-203ENST00000392811 ATAD2Q6PL18 1390 aa33.73■■■□□ 2.99
SMARCD3-203ENST00000392811 SLFN5Q08AF3 891 aa33.72■■■□□ 2.99
SMARCD3-203ENST00000392811 ZMYM3Q14202 1370 aa33.72■■■□□ 2.99
SMARCD3-203ENST00000392811 PLIN1O60240 522 aa33.72■■■□□ 2.99
SMARCD3-203ENST00000392811 ESF1Q9H501 851 aaKnown RBP33.72■■■□□ 2.99
SMARCD3-203ENST00000392811 SETD1AO15047 1707 aaKnown RBP33.71■■■□□ 2.99
SMARCD3-203ENST00000392811 ABCC11Q96J66 1382 aa33.69■■■□□ 2.98
SMARCD3-203ENST00000392811 MTHFSP49914 203 aa33.69■■■□□ 2.98
SMARCD3-203ENST00000392811 TRMT2AQ8IZ69 625 aaKnown RBP33.68■■■□□ 2.98
SMARCD3-203ENST00000392811 NGEFQ8N5V2 710 aa33.68■■■□□ 2.98
SMARCD3-203ENST00000392811 DLC1Q96QB1 1528 aa33.67■■■□□ 2.98
SMARCD3-203ENST00000392811 CD163L1Q9NR16 1453 aa33.65■■■□□ 2.98
SMARCD3-203ENST00000392811 SPINK5Q9NQ38 1064 aaPredicted RBP33.64■■■□□ 2.98
SMARCD3-203ENST00000392811 CFAP53Q96M91 514 aa33.63■■■□□ 2.97
SMARCD3-203ENST00000392811 CDK19Q9BWU1 502 aa33.63■■■□□ 2.97
SMARCD3-203ENST00000392811 TERF2IPQ9NYB0 399 aa33.63■■■□□ 2.97
SMARCD3-203ENST00000392811 NRXN3Q9Y4C0 1643 aa33.63■■■□□ 2.97
SMARCD3-203ENST00000392811 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.6■■■□□ 2.97
SMARCD3-203ENST00000392811 CRBNQ96SW2 442 aa33.59■■■□□ 2.97
SMARCD3-203ENST00000392811 E9PSI1 815 aa33.58■■■□□ 2.97
SMARCD3-203ENST00000392811 WAPLQ7Z5K2 1190 aa33.58■■■□□ 2.97
SMARCD3-203ENST00000392811 RUNDC1Q96C34 613 aa33.58■■■□□ 2.97
SMARCD3-203ENST00000392811 DMRT2Q9Y5R5 561 aa33.58■■■□□ 2.97
SMARCD3-203ENST00000392811 NKTRP30414 1462 aaKnown RBP33.58■■■□□ 2.97
SMARCD3-203ENST00000392811 TNRQ92752 1358 aa33.57■■■□□ 2.96
SMARCD3-203ENST00000392811 GGNBP2Q9H3C7 697 aa33.57■■■□□ 2.96
SMARCD3-203ENST00000392811 IQSEC2Q5JU85 1478 aa33.56■■■□□ 2.96
SMARCD3-203ENST00000392811 ANKRD26Q9UPS8 1709 aa33.56■■■□□ 2.96
SMARCD3-203ENST00000392811 C20orf194Q5TEA3 1177 aa33.55■■■□□ 2.96
SMARCD3-203ENST00000392811 WWC1Q8IX03 1113 aa33.55■■■□□ 2.96
SMARCD3-203ENST00000392811 NLRP1Q9C000 1473 aa33.54■■■□□ 2.96
SMARCD3-203ENST00000392811 MED14O60244 1454 aa33.54■■■□□ 2.96
SMARCD3-203ENST00000392811 FYB1O15117 783 aa33.53■■■□□ 2.96
SMARCD3-203ENST00000392811 HDGFL2Q7Z4V5 671 aaPredicted RBP33.53■■■□□ 2.96
SMARCD3-203ENST00000392811 CABP1Q9NZU7 370 aa33.53■■■□□ 2.96
SMARCD3-203ENST00000392811 METP08581 1390 aa33.52■■■□□ 2.96
SMARCD3-203ENST00000392811 FANCIQ9NVI1 1328 aa33.52■■■□□ 2.96
SMARCD3-203ENST00000392811 TCP11L2Q8N4U5 519 aa33.5■■■□□ 2.95
SMARCD3-203ENST00000392811 RRP7AQ9Y3A4 280 aaKnown RBP33.48■■■□□ 2.95
SMARCD3-203ENST00000392811 UBR1Q8IWV7 1749 aa33.48■■■□□ 2.95
SMARCD3-203ENST00000392811 HDGFP51858 240 aaKnown RBP33.48■■■□□ 2.95
SMARCD3-203ENST00000392811 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.48■■■□□ 2.95
SMARCD3-203ENST00000392811 NEUROD2Q15784 382 aa33.46■■■□□ 2.95
SMARCD3-203ENST00000392811 KIF20BQ96Q89 1820 aa33.46■■■□□ 2.95
SMARCD3-203ENST00000392811 PHF23Q9BUL5 403 aaPredicted RBP33.45■■■□□ 2.95
SMARCD3-203ENST00000392811 U2AF1L5P0DN76 240 aaPredicted RBP33.45■■■□□ 2.94
SMARCD3-203ENST00000392811 U2AF1Q01081 240 aaKnown RBP eCLIP33.45■■■□□ 2.94
SMARCD3-203ENST00000392811 ATP7BP35670 1465 aa33.44■■■□□ 2.94
SMARCD3-203ENST00000392811 TMEM2Q9UHN6 1383 aa33.44■■■□□ 2.94
SMARCD3-203ENST00000392811 COL3A1P02461 1466 aaPredicted RBP33.44■■■□□ 2.94
SMARCD3-203ENST00000392811 KNDC1Q76NI1 1749 aa33.44■■■□□ 2.94
SMARCD3-203ENST00000392811 TXNDC2Q86VQ3 553 aa33.41■■■□□ 2.94
SMARCD3-203ENST00000392811 WASLO00401 505 aaPredicted RBP33.4■■■□□ 2.94
SMARCD3-203ENST00000392811 TECPR2O15040 1411 aa33.4■■■□□ 2.94
SMARCD3-203ENST00000392811 FAM135BQ49AJ0 1406 aa33.39■■■□□ 2.94
SMARCD3-203ENST00000392811 CCDC27Q2M243 656 aa33.39■■■□□ 2.94
SMARCD3-203ENST00000392811 ADGRB2O60241 1585 aa33.39■■■□□ 2.93
SMARCD3-203ENST00000392811 BCAR3O75815 825 aa33.38■■■□□ 2.93
SMARCD3-203ENST00000392811 WDR63Q8IWG1 891 aa33.38■■■□□ 2.93
SMARCD3-203ENST00000392811 SIRT1Q96EB6 747 aa33.37■■■□□ 2.93
SMARCD3-203ENST00000392811 NCBP3Q53F19 620 aaKnown RBP33.36■■■□□ 2.93
SMARCD3-203ENST00000392811 CPS1P31327 1500 aa33.36■■■□□ 2.93
SMARCD3-203ENST00000392811 MSH5O43196 834 aa33.35■■■□□ 2.93
SMARCD3-203ENST00000392811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.35■■■□□ 2.93
SMARCD3-203ENST00000392811 U2SURPO15042 1029 aaKnown RBP33.34■■■□□ 2.93
SMARCD3-203ENST00000392811 PPIP5K1Q6PFW1 1433 aa33.33■■■□□ 2.93
SMARCD3-203ENST00000392811 CPSF1Q10570 1443 aaKnown RBP33.32■■■□□ 2.92
SMARCD3-203ENST00000392811 ADAMTS13Q76LX8 1427 aa33.31■■■□□ 2.92
SMARCD3-203ENST00000392811 PNPLA6Q8IY17 1366 aa33.31■■■□□ 2.92
SMARCD3-203ENST00000392811 TCERG1O14776 1098 aaKnown RBP33.31■■■□□ 2.92
SMARCD3-203ENST00000392811 CEBPAP49715 358 aaPredicted RBP33.3■■■□□ 2.92
SMARCD3-203ENST00000392811 PLEKHF1Q96S99 279 aa33.3■■■□□ 2.92
SMARCD3-203ENST00000392811 NUDT16Q96DE0 195 aaKnown RBP33.28■■■□□ 2.92
SMARCD3-203ENST00000392811 EDC4Q6P2E9 1401 aaKnown RBP33.27■■■□□ 2.92
SMARCD3-203ENST00000392811 DIAPH1O60610 1272 aaKnown RBP33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms