RNA–Protein interactions for RNA: ENST00000391945.8

ERCC2-204, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC2, Length 4,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-204ENST00000391945 PRKAR2BP31323 418 aa16.37■□□□□ 0.21
ERCC2-204ENST00000391945 CDC42BPBQ9Y5S2 1711 aa16.37■□□□□ 0.21
ERCC2-204ENST00000391945 TNRQ92752 1358 aa16.36■□□□□ 0.21
ERCC2-204ENST00000391945 ESCO1Q5FWF5 840 aa16.36■□□□□ 0.21
ERCC2-204ENST00000391945 AMOTL2Q9Y2J4 779 aa16.36■□□□□ 0.21
ERCC2-204ENST00000391945 ZMYM3Q14202 1370 aa16.35■□□□□ 0.21
ERCC2-204ENST00000391945 UGGT1Q9NYU2 1555 aa16.35■□□□□ 0.21
ERCC2-204ENST00000391945 ABTB2Q8N961 1025 aa16.35■□□□□ 0.21
ERCC2-204ENST00000391945 CARD14Q9BXL6 1004 aa16.35■□□□□ 0.21
ERCC2-204ENST00000391945 NME9Q86XW9 330 aa16.35■□□□□ 0.21
ERCC2-204ENST00000391945 APBB1O00213 710 aa16.34■□□□□ 0.21
ERCC2-204ENST00000391945 WASLO00401 505 aaPredicted RBP16.34■□□□□ 0.21
ERCC2-204ENST00000391945 LMOD3Q0VAK6 560 aa16.34■□□□□ 0.21
ERCC2-204ENST00000391945 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
ERCC2-204ENST00000391945 HSP90AA1P07900 732 aaKnown RBP16.33■□□□□ 0.2
ERCC2-204ENST00000391945 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.2
ERCC2-204ENST00000391945 NGEFQ8N5V2 710 aa16.32■□□□□ 0.2
ERCC2-204ENST00000391945 BCAR3O75815 825 aa16.32■□□□□ 0.2
ERCC2-204ENST00000391945 ZNF692Q9BU19 519 aaPredicted RBP16.32■□□□□ 0.2
ERCC2-204ENST00000391945 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
ERCC2-204ENST00000391945 ZFYVE16Q7Z3T8 1539 aa16.31■□□□□ 0.2
ERCC2-204ENST00000391945 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
ERCC2-204ENST00000391945 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
ERCC2-204ENST00000391945 SLC4A10Q6U841 1118 aa16.3■□□□□ 0.2
ERCC2-204ENST00000391945 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
ERCC2-204ENST00000391945 SHROOM2Q13796 1616 aa16.3■□□□□ 0.2
ERCC2-204ENST00000391945 TSPOAP1O95153 1857 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 SULT6B1Q6IMI4 303 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 EMILIN1Q9Y6C2 1016 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 PARD3Q8TEW0 1356 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 SMG6Q86US8 1419 aaKnown RBP16.29■□□□□ 0.2
ERCC2-204ENST00000391945 MLH3Q9UHC1 1453 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 ZKSCAN2Q63HK3 967 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 NCKAP5LQ9HCH0 1330 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 ATF3P18847 181 aa16.29■□□□□ 0.2
ERCC2-204ENST00000391945 EIF2AK4Q9P2K8 1649 aaKnown RBP16.28■□□□□ 0.2
ERCC2-204ENST00000391945 COL17A1Q9UMD9 1497 aaPredicted RBP16.28■□□□□ 0.2
ERCC2-204ENST00000391945 EXOSC9Q06265 439 aaKnown RBP16.27■□□□□ 0.2
ERCC2-204ENST00000391945 NECTIN2Q92692 538 aa16.27■□□□□ 0.2
ERCC2-204ENST00000391945 RWDD1Q9H446 243 aaPredicted RBP16.27■□□□□ 0.2
ERCC2-204ENST00000391945 WWC1Q8IX03 1113 aa16.27■□□□□ 0.2
ERCC2-204ENST00000391945 CHMP4BQ9H444 224 aaKnown RBP16.27■□□□□ 0.2
ERCC2-204ENST00000391945 STK31Q9BXU1 1019 aa16.27■□□□□ 0.19
ERCC2-204ENST00000391945 FYB1O15117 783 aa16.26■□□□□ 0.19
ERCC2-204ENST00000391945 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
ERCC2-204ENST00000391945 ZRANB1Q9UGI0 708 aa16.24■□□□□ 0.19
ERCC2-204ENST00000391945 SLFN5Q08AF3 891 aa16.24■□□□□ 0.19
ERCC2-204ENST00000391945 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
ERCC2-204ENST00000391945 KDM5DQ9BY66 1539 aa16.24■□□□□ 0.19
ERCC2-204ENST00000391945 PRDM15P57071 1507 aaPredicted RBP16.23■□□□□ 0.19
ERCC2-204ENST00000391945 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
ERCC2-204ENST00000391945 TMPOP42166 694 aaKnown RBP16.23■□□□□ 0.19
ERCC2-204ENST00000391945 PLXNC1O60486 1568 aa16.23■□□□□ 0.19
ERCC2-204ENST00000391945 CROCC2H7BZ55 1655 aa16.22■□□□□ 0.19
ERCC2-204ENST00000391945 PTPRTO14522 1441 aa16.22■□□□□ 0.19
ERCC2-204ENST00000391945 ASXL1Q8IXJ9 1541 aa16.22■□□□□ 0.19
ERCC2-204ENST00000391945 GNAI1P63096 354 aa16.21■□□□□ 0.19
ERCC2-204ENST00000391945 YTHDC2Q9H6S0 1430 aaKnown RBP16.21■□□□□ 0.19
ERCC2-204ENST00000391945 ARAP3Q8WWN8 1544 aa16.21■□□□□ 0.19
ERCC2-204ENST00000391945 FOXO3O43524 673 aa16.21■□□□□ 0.19
ERCC2-204ENST00000391945 CENPQQ7L2Z9 268 aaPredicted RBP16.21■□□□□ 0.19
ERCC2-204ENST00000391945 ANKRD36BQ8N2N9 1353 aa16.21■□□□□ 0.18
ERCC2-204ENST00000391945 TEFQ10587 303 aa16.2■□□□□ 0.18
ERCC2-204ENST00000391945 C20orf194Q5TEA3 1177 aa16.2■□□□□ 0.18
ERCC2-204ENST00000391945 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
ERCC2-204ENST00000391945 ACEP12821 1306 aa16.2■□□□□ 0.18
ERCC2-204ENST00000391945 PDE4AP27815 886 aa16.2■□□□□ 0.18
ERCC2-204ENST00000391945 EIF2S2P20042 333 aaKnown RBP16.2■□□□□ 0.18
ERCC2-204ENST00000391945 IPO9Q96P70 1041 aaKnown RBP16.2■□□□□ 0.18
ERCC2-204ENST00000391945 TRPM2O94759 1503 aa16.2■□□□□ 0.18
ERCC2-204ENST00000391945 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
ERCC2-204ENST00000391945 HECW2Q9P2P5 1572 aa16.19■□□□□ 0.18
ERCC2-204ENST00000391945 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
ERCC2-204ENST00000391945 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
ERCC2-204ENST00000391945 CFAP74Q9C0B2 1584 aa16.19■□□□□ 0.18
ERCC2-204ENST00000391945 FCHSD2O94868 740 aa16.18■□□□□ 0.18
ERCC2-204ENST00000391945 ABCA9Q8IUA7 1624 aa16.18■□□□□ 0.18
ERCC2-204ENST00000391945 KDM5CP41229 1560 aa16.18■□□□□ 0.18
ERCC2-204ENST00000391945 C1orf141Q5JVX7 400 aa16.18■□□□□ 0.18
ERCC2-204ENST00000391945 DUSP27Q5VZP5 1158 aa16.18■□□□□ 0.18
ERCC2-204ENST00000391945 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
ERCC2-204ENST00000391945 FANCIQ9NVI1 1328 aa16.17■□□□□ 0.18
ERCC2-204ENST00000391945 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
ERCC2-204ENST00000391945 A0A1W2PP64 1363 aa16.17■□□□□ 0.18
ERCC2-204ENST00000391945 LTKP29376 864 aa16.17■□□□□ 0.18
ERCC2-204ENST00000391945 IQGAP3Q86VI3 1631 aa16.17■□□□□ 0.18
ERCC2-204ENST00000391945 PHF8Q9UPP1 1060 aa16.15■□□□□ 0.18
ERCC2-204ENST00000391945 KCNA6P17658 529 aa16.15■□□□□ 0.18
ERCC2-204ENST00000391945 BECN1Q14457 450 aa16.15■□□□□ 0.18
ERCC2-204ENST00000391945 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
ERCC2-204ENST00000391945 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
ERCC2-204ENST00000391945 PPIP5K1Q6PFW1 1433 aa16.14■□□□□ 0.17
ERCC2-204ENST00000391945 DDX19BQ9UMR2 479 aa16.14■□□□□ 0.17
ERCC2-204ENST00000391945 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
ERCC2-204ENST00000391945 UNC13BO14795 1591 aa16.13■□□□□ 0.17
ERCC2-204ENST00000391945 DEKP35659 375 aaKnown RBP16.13■□□□□ 0.17
ERCC2-204ENST00000391945 TWISTNBQ3B726 338 aaPredicted RBP16.13■□□□□ 0.17
ERCC2-204ENST00000391945 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
ERCC2-204ENST00000391945 NFE2L2Q16236 605 aa16.12■□□□□ 0.17
ERCC2-204ENST00000391945 NOB1Q9ULX3 412 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms