RNA–Protein interactions for RNA: ENST00000389005.5

NCBP3-201, Transcript of nuclear cap binding subunit 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NCBP3, Length 12,770 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-201ENST00000389005 EID1Q9Y6B2 187 aa9.7□□□□□ -0.86
NCBP3-201ENST00000389005 IFIT2P09913 472 aaKnown RBP9.7□□□□□ -0.86
NCBP3-201ENST00000389005 WDR63Q8IWG1 891 aa9.7□□□□□ -0.86
NCBP3-201ENST00000389005 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
NCBP3-201ENST00000389005 CT47B1P0C2W7 299 aaPredicted RBP9.69□□□□□ -0.86
NCBP3-201ENST00000389005 NCOA1Q15788 1441 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 MVPQ14764 893 aaKnown RBP9.69□□□□□ -0.86
NCBP3-201ENST00000389005 RNF20Q5VTR2 975 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 CCAR2Q8N163 923 aaKnown RBP9.69□□□□□ -0.86
NCBP3-201ENST00000389005 CIZ1Q9ULV3 898 aaPredicted RBP9.69□□□□□ -0.86
NCBP3-201ENST00000389005 MAP3K1Q13233 1512 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 HECW1Q76N89 1606 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 CREBRFQ8IUR6 639 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 NECTIN2Q92692 538 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 GCC1Q96CN9 775 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 ESPNB1AK53 854 aa9.69□□□□□ -0.86
NCBP3-201ENST00000389005 ANKRD30BQ9BXX2 1392 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 IFT57Q9NWB7 429 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 EIF2S2P20042 333 aaKnown RBP9.68□□□□□ -0.86
NCBP3-201ENST00000389005 NOB1Q9ULX3 412 aaKnown RBP9.68□□□□□ -0.86
NCBP3-201ENST00000389005 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 NOC3LQ8WTT2 800 aaKnown RBP9.68□□□□□ -0.86
NCBP3-201ENST00000389005 TEFQ10587 303 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 TOMM22Q9NS69 142 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
NCBP3-201ENST00000389005 NEK4P51957 841 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 RASSF8Q8NHQ8 419 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 PRPF40AO75400 957 aaKnown RBP9.68□□□□□ -0.86
NCBP3-201ENST00000389005 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
NCBP3-201ENST00000389005 TSPYL4Q9UJ04 414 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 SLFN5Q08AF3 891 aa9.68□□□□□ -0.86
NCBP3-201ENST00000389005 HMGN5P82970 282 aaKnown RBP9.68□□□□□ -0.86
NCBP3-201ENST00000389005 TROQ12816 1431 aaPredicted RBP9.67□□□□□ -0.86
NCBP3-201ENST00000389005 C1orf115Q9H7X2 142 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 MCM2P49736 904 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 HSP90AB4PQ58FF6 505 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 SKAP1Q86WV1 359 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 ERC2O15083 957 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 TSPY26PQ9H489 355 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 CCDC73Q6ZRK6 1079 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.67□□□□□ -0.86
NCBP3-201ENST00000389005 ARHGAP5Q13017 1502 aa9.67□□□□□ -0.86
NCBP3-201ENST00000389005 K7ELQ4 463 aaPredicted RBP9.67□□□□□ -0.86
NCBP3-201ENST00000389005 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 SASS6Q6UVJ0 657 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 C20orf194Q5TEA3 1177 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 NEXNQ0ZGT2 675 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 G3BP1Q13283 466 aaKnown RBP eCLIP9.66□□□□□ -0.86
NCBP3-201ENST00000389005 ATF7IPQ6VMQ6 1270 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 HOMER1Q86YM7 354 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 SLC12A5Q9H2X9 1139 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 GRIN2BQ13224 1484 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 C1orf141Q5JVX7 400 aa9.66□□□□□ -0.86
NCBP3-201ENST00000389005 CPLX1O14810 134 aa9.65□□□□□ -0.86
NCBP3-201ENST00000389005 PRG4Q92954 1404 aaPredicted RBP9.65□□□□□ -0.86
NCBP3-201ENST00000389005 CWC22Q9HCG8 908 aaKnown RBP9.65□□□□□ -0.86
NCBP3-201ENST00000389005 PLEKHH2Q8IVE3 1493 aa9.65□□□□□ -0.86
NCBP3-201ENST00000389005 UBTFL1P0CB47 393 aaPredicted RBP9.65□□□□□ -0.87
NCBP3-201ENST00000389005 CPLX2Q6PUV4 134 aaKnown RBP9.65□□□□□ -0.87
NCBP3-201ENST00000389005 GPS2Q13227 327 aa9.65□□□□□ -0.87
NCBP3-201ENST00000389005 PTPN23Q9H3S7 1636 aa9.65□□□□□ -0.87
NCBP3-201ENST00000389005 TPM1P09493 284 aa9.65□□□□□ -0.87
NCBP3-201ENST00000389005 RRP9O43818 475 aaKnown RBP9.64□□□□□ -0.87
NCBP3-201ENST00000389005 TWISTNBQ3B726 338 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-201ENST00000389005 TEX35Q5T0J7 233 aa9.64□□□□□ -0.87
NCBP3-201ENST00000389005 EPRSP07814 1512 aaKnown RBP9.64□□□□□ -0.87
NCBP3-201ENST00000389005 A0A0U1RQG5 324 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-201ENST00000389005 TPD52L1Q16890 204 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-201ENST00000389005 LRRFIP1Q32MZ4 808 aaKnown RBP9.64□□□□□ -0.87
NCBP3-201ENST00000389005 FIBPO43427 364 aa9.64□□□□□ -0.87
NCBP3-201ENST00000389005 CHD1LQ86WJ1 897 aa9.64□□□□□ -0.87
NCBP3-201ENST00000389005 TOPBP1Q92547 1522 aa9.63□□□□□ -0.87
NCBP3-201ENST00000389005 PKNOX2Q96KN3 472 aa9.63□□□□□ -0.87
NCBP3-201ENST00000389005 LETM1O95202 739 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-201ENST00000389005 GNAI3P08754 354 aa9.63□□□□□ -0.87
NCBP3-201ENST00000389005 RBM10P98175 930 aaKnown RBP9.63□□□□□ -0.87
NCBP3-201ENST00000389005 WWC1Q8IX03 1113 aa9.63□□□□□ -0.87
NCBP3-201ENST00000389005 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
NCBP3-201ENST00000389005 AFAP1Q8N556 730 aa9.63□□□□□ -0.87
NCBP3-201ENST00000389005 PES1O00541 588 aaKnown RBP9.63□□□□□ -0.87
NCBP3-201ENST00000389005 POLA1P09884 1462 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-201ENST00000389005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-201ENST00000389005 TRIM5Q9C035 493 aa9.63□□□□□ -0.87
NCBP3-201ENST00000389005 TSR1Q2NL82 804 aaKnown RBP9.62□□□□□ -0.87
NCBP3-201ENST00000389005 CNTROBQ8N137 903 aa9.62□□□□□ -0.87
NCBP3-201ENST00000389005 SYNJ2O15056 1496 aa9.62□□□□□ -0.87
NCBP3-201ENST00000389005 MAPKBP1O60336 1514 aa9.62□□□□□ -0.87
NCBP3-201ENST00000389005 AKAP17AQ02040 695 aaKnown RBP9.62□□□□□ -0.87
NCBP3-201ENST00000389005 CCDC27Q2M243 656 aa9.62□□□□□ -0.87
NCBP3-201ENST00000389005 CLSTN1O94985 981 aa9.62□□□□□ -0.87
NCBP3-201ENST00000389005 MNS1Q8NEH6 495 aa9.62□□□□□ -0.87
NCBP3-201ENST00000389005 ARGLU1Q9NWB6 273 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-201ENST00000389005 PDCP20941 246 aa9.62□□□□□ -0.87
NCBP3-201ENST00000389005 HMGXB3Q12766 1538 aa9.61□□□□□ -0.87
NCBP3-201ENST00000389005 SURF6O75683 361 aaKnown RBP9.61□□□□□ -0.87
NCBP3-201ENST00000389005 DDX58O95786 925 aaKnown RBP9.61□□□□□ -0.87
NCBP3-201ENST00000389005 CDK13Q14004 1512 aaKnown RBP9.61□□□□□ -0.87
NCBP3-201ENST00000389005 PRKCSHP14314 528 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-201ENST00000389005 FOSBP53539 338 aa9.61□□□□□ -0.87
NCBP3-201ENST00000389005 SYNE3Q6ZMZ3 975 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms