RNA–Protein interactions for RNA: ENST00000388835.3

KRT18-201, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT18, Length 1,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-201ENST00000388835 CDC42BPGQ6DT37 1551 aa37.73■■■■□ 3.63
KRT18-201ENST00000388835 ZNF772Q68DY9 489 aaPredicted RBP37.73■■■■□ 3.63
KRT18-201ENST00000388835 KNDC1Q76NI1 1749 aa37.73■■■■□ 3.63
KRT18-201ENST00000388835 ABCC11Q96J66 1382 aa37.72■■■■□ 3.63
KRT18-201ENST00000388835 LAMC1P11047 1609 aa37.72■■■■□ 3.63
KRT18-201ENST00000388835 PLEKHH1Q9ULM0 1364 aa37.71■■■■□ 3.63
KRT18-201ENST00000388835 YTHDC2Q9H6S0 1430 aaKnown RBP37.7■■■■□ 3.63
KRT18-201ENST00000388835 ESCO1Q5FWF5 840 aa37.68■■■■□ 3.62
KRT18-201ENST00000388835 NUTM2FA1L443 756 aa37.68■■■■□ 3.62
KRT18-201ENST00000388835 C14orf93Q9H972 538 aaKnown RBP37.68■■■■□ 3.62
KRT18-201ENST00000388835 SOS2Q07890 1332 aaPredicted RBP37.67■■■■□ 3.62
KRT18-201ENST00000388835 MYOM2P54296 1465 aa37.67■■■■□ 3.62
KRT18-201ENST00000388835 CFAP70Q5T0N1 1121 aa37.67■■■■□ 3.62
KRT18-201ENST00000388835 NRXN1Q9ULB1 1477 aa37.66■■■■□ 3.62
KRT18-201ENST00000388835 AFF2P51816 1311 aa37.64■■■■□ 3.62
KRT18-201ENST00000388835 C8orf37Q96NL8 207 aa37.62■■■■□ 3.61
KRT18-201ENST00000388835 DHX57Q6P158 1386 aaKnown RBP37.59■■■■□ 3.61
KRT18-201ENST00000388835 ADAMTS2O95450 1211 aa37.59■■■■□ 3.61
KRT18-201ENST00000388835 NPHP3Q7Z494 1330 aa37.57■■■■□ 3.6
KRT18-201ENST00000388835 FOXO3O43524 673 aa37.56■■■■□ 3.6
KRT18-201ENST00000388835 XPCQ01831 940 aaPredicted RBP37.56■■■■□ 3.6
KRT18-201ENST00000388835 FMN2Q9NZ56 1722 aa37.56■■■■□ 3.6
KRT18-201ENST00000388835 RXRBP28702 533 aa37.55■■■■□ 3.6
KRT18-201ENST00000388835 KDM2AQ9Y2K7 1162 aa37.55■■■■□ 3.6
KRT18-201ENST00000388835 HRCP23327 699 aa37.54■■■■□ 3.6
KRT18-201ENST00000388835 SIRT1Q96EB6 747 aa37.54■■■■□ 3.6
KRT18-201ENST00000388835 SAFB2Q14151 953 aaKnown RBP eCLIP37.52■■■■□ 3.6
KRT18-201ENST00000388835 PXDNQ92626 1479 aa37.51■■■■□ 3.6
KRT18-201ENST00000388835 DCAF11Q8TEB1 546 aa37.51■■■■□ 3.59
KRT18-201ENST00000388835 NGLY1Q96IV0 654 aa37.51■■■■□ 3.59
KRT18-201ENST00000388835 PRAM1Q96QH2 718 aa37.5■■■■□ 3.59
KRT18-201ENST00000388835 COL22A1Q8NFW1 1626 aaPredicted RBP37.47■■■■□ 3.59
KRT18-201ENST00000388835 RGPD8O14715 1765 aaPredicted RBP37.46■■■■□ 3.59
KRT18-201ENST00000388835 QTRT2Q9H974 415 aaKnown RBP37.46■■■■□ 3.59
KRT18-201ENST00000388835 POGKQ9P215 609 aa37.45■■■■□ 3.59
KRT18-201ENST00000388835 KIF1AQ12756 1690 aa37.42■■■■□ 3.58
KRT18-201ENST00000388835 ADGRB1O14514 1584 aa37.42■■■■□ 3.58
KRT18-201ENST00000388835 TRAK1Q9UPV9 953 aa37.41■■■■□ 3.58
KRT18-201ENST00000388835 DLC1Q96QB1 1528 aa37.41■■■■□ 3.58
KRT18-201ENST00000388835 CDK12Q9NYV4 1490 aaPredicted RBP37.38■■■■□ 3.57
KRT18-201ENST00000388835 RBM6P78332 1123 aaKnown RBP37.37■■■■□ 3.57
KRT18-201ENST00000388835 USP21Q9UK80 565 aa37.36■■■■□ 3.57
KRT18-201ENST00000388835 PHF8Q9UPP1 1060 aa37.36■■■■□ 3.57
KRT18-201ENST00000388835 KRT28Q7Z3Y7 464 aa37.35■■■■□ 3.57
KRT18-201ENST00000388835 STAC3Q96MF2 364 aa37.32■■■■□ 3.56
KRT18-201ENST00000388835 HIRIP3Q9BW71 556 aaPredicted RBP37.32■■■■□ 3.56
KRT18-201ENST00000388835 SPATA31A3Q5VYP0 1347 aa37.31■■■■□ 3.56
KRT18-201ENST00000388835 MARF1Q9Y4F3 1742 aaKnown RBP37.31■■■■□ 3.56
KRT18-201ENST00000388835 RGS12O14924 1447 aa37.31■■■■□ 3.56
KRT18-201ENST00000388835 UPF1Q92900 1129 aaKnown RBP eCLIP37.3■■■■□ 3.56
KRT18-201ENST00000388835 MINK1Q8N4C8 1332 aaPredicted RBP37.3■■■■□ 3.56
KRT18-201ENST00000388835 FNBP4Q8N3X1 1017 aaPredicted RBP37.29■■■■□ 3.56
KRT18-201ENST00000388835 ADGRB2O60241 1585 aa37.28■■■■□ 3.56
KRT18-201ENST00000388835 USP32Q8NFA0 1604 aa37.27■■■■□ 3.56
KRT18-201ENST00000388835 TRPC5Q9UL62 973 aaPredicted RBP37.26■■■■□ 3.56
KRT18-201ENST00000388835 PMFBP1Q8TBY8 1022 aa37.25■■■■□ 3.55
KRT18-201ENST00000388835 PSME1Q06323 249 aa37.25■■■■□ 3.55
KRT18-201ENST00000388835 ANKARQ7Z5J8 1434 aa37.24■■■■□ 3.55
KRT18-201ENST00000388835 PLEKHG5O94827 1062 aa37.23■■■■□ 3.55
KRT18-201ENST00000388835 TNS3Q68CZ2 1445 aa37.22■■■■□ 3.55
KRT18-201ENST00000388835 ATRNO75882 1429 aa37.2■■■■□ 3.55
KRT18-201ENST00000388835 LMOD2Q6P5Q4 547 aa37.2■■■■□ 3.55
KRT18-201ENST00000388835 ARHGEF28Q8N1W1 1705 aaKnown RBP37.19■■■■□ 3.54
KRT18-201ENST00000388835 BCL9LQ86UU0 1499 aa37.18■■■■□ 3.54
KRT18-201ENST00000388835 HAP1P54257 671 aaPredicted RBP37.17■■■■□ 3.54
KRT18-201ENST00000388835 CABLES1Q8TDN4 633 aa37.17■■■■□ 3.54
KRT18-201ENST00000388835 WASLO00401 505 aaPredicted RBP37.16■■■■□ 3.54
KRT18-201ENST00000388835 SBNO1A3KN83 1393 aa37.15■■■■□ 3.54
KRT18-201ENST00000388835 PRR36Q9H6K5 1346 aa37.15■■■■□ 3.54
KRT18-201ENST00000388835 TULP4Q9NRJ4 1543 aa37.14■■■■□ 3.54
KRT18-201ENST00000388835 EIF3AQ14152 1382 aaKnown RBP37.14■■■■□ 3.54
KRT18-201ENST00000388835 ARHGEF10O15013 1369 aa37.09■■■■□ 3.53
KRT18-201ENST00000388835 KIAA1210Q9ULL0 1709 aa37.08■■■■□ 3.53
KRT18-201ENST00000388835 ABCA3Q99758 1704 aa37.07■■■■□ 3.52
KRT18-201ENST00000388835 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.07■■■■□ 3.52
KRT18-201ENST00000388835 GPRASP1Q5JY77 1395 aa37.07■■■■□ 3.52
KRT18-201ENST00000388835 SLIT2O94813 1529 aa37.06■■■■□ 3.52
KRT18-201ENST00000388835 TRPM3Q9HCF6 1732 aaPredicted RBP37.06■■■■□ 3.52
KRT18-201ENST00000388835 UNC5CLQ8IV45 518 aa37.06■■■■□ 3.52
KRT18-201ENST00000388835 GJD4Q96KN9 370 aaPredicted RBP37.05■■■■□ 3.52
KRT18-201ENST00000388835 NBPF1Q3BBV0 1214 aa37.04■■■■□ 3.52
KRT18-201ENST00000388835 NGDNQ8NEJ9 315 aaKnown RBP37.04■■■■□ 3.52
KRT18-201ENST00000388835 ATAD2Q6PL18 1390 aa37.01■■■■□ 3.51
KRT18-201ENST00000388835 NUDT16Q96DE0 195 aaKnown RBP37■■■■□ 3.51
KRT18-201ENST00000388835 ITSN1Q15811 1721 aa37■■■■□ 3.51
KRT18-201ENST00000388835 PLCH1Q4KWH8 1693 aa36.99■■■■□ 3.51
KRT18-201ENST00000388835 ALS2Q96Q42 1657 aa36.99■■■■□ 3.51
KRT18-201ENST00000388835 ATP7BP35670 1465 aa36.98■■■■□ 3.51
KRT18-201ENST00000388835 CDK19Q9BWU1 502 aa36.98■■■■□ 3.51
KRT18-201ENST00000388835 PAK3O75914 559 aaPredicted RBP36.97■■■■□ 3.51
KRT18-201ENST00000388835 RALGAPBQ86X10 1494 aa36.97■■■■□ 3.51
KRT18-201ENST00000388835 GLI3P10071 1580 aa36.96■■■■□ 3.51
KRT18-201ENST00000388835 SIN3AQ96ST3 1273 aa36.94■■■■□ 3.5
KRT18-201ENST00000388835 NWD2Q9ULI1 1742 aa36.93■■■■□ 3.5
KRT18-201ENST00000388835 FAM83GA6ND36 823 aa36.92■■■■□ 3.5
KRT18-201ENST00000388835 L3MBTL2Q969R5 705 aa36.92■■■■□ 3.5
KRT18-201ENST00000388835 CCDC9Q9Y3X0 531 aaKnown RBP36.91■■■■□ 3.5
KRT18-201ENST00000388835 NEUROD1Q13562 356 aa36.88■■■■□ 3.49
KRT18-201ENST00000388835 VPS72Q15906 364 aa36.88■■■■□ 3.49
KRT18-201ENST00000388835 TOPAZ1Q8N9V7 1692 aa36.86■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms