RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CDC42BPGQ6DT37 1551 aa39.17■■■■□ 3.86
NPHP3-202ENST00000383282 TECPR2O15040 1411 aa39.17■■■■□ 3.86
NPHP3-202ENST00000383282 ESCO1Q5FWF5 840 aa39.16■■■■□ 3.86
NPHP3-202ENST00000383282 PIK3C2GO75747 1445 aa39.15■■■■□ 3.86
NPHP3-202ENST00000383282 IFT172Q9UG01 1749 aa39.15■■■■□ 3.86
NPHP3-202ENST00000383282 CDK12Q9NYV4 1490 aaPredicted RBP39.15■■■■□ 3.86
NPHP3-202ENST00000383282 ABCC11Q96J66 1382 aa39.14■■■■□ 3.86
NPHP3-202ENST00000383282 NPHP3Q7Z494 1330 aa39.14■■■■□ 3.86
NPHP3-202ENST00000383282 ADAMTS2O95450 1211 aa39.13■■■■□ 3.85
NPHP3-202ENST00000383282 WAPLQ7Z5K2 1190 aa39.13■■■■□ 3.85
NPHP3-202ENST00000383282 TMEM132EQ6IEE7 984 aa39.12■■■■□ 3.85
NPHP3-202ENST00000383282 NGLY1Q96IV0 654 aa39.11■■■■□ 3.85
NPHP3-202ENST00000383282 QTRT2Q9H974 415 aaKnown RBP39.1■■■■□ 3.85
NPHP3-202ENST00000383282 UPF1Q92900 1129 aaKnown RBP eCLIP39.08■■■■□ 3.85
NPHP3-202ENST00000383282 RBM6P78332 1123 aaKnown RBP39.07■■■■□ 3.85
NPHP3-202ENST00000383282 YTHDC2Q9H6S0 1430 aaKnown RBP39.06■■■■□ 3.84
NPHP3-202ENST00000383282 KNDC1Q76NI1 1749 aa39.05■■■■□ 3.84
NPHP3-202ENST00000383282 NUTM2FA1L443 756 aa39.03■■■■□ 3.84
NPHP3-202ENST00000383282 PLEKHH1Q9ULM0 1364 aa39.03■■■■□ 3.84
NPHP3-202ENST00000383282 FOXO3O43524 673 aa39.02■■■■□ 3.84
NPHP3-202ENST00000383282 C14orf93Q9H972 538 aaKnown RBP39.02■■■■□ 3.84
NPHP3-202ENST00000383282 RAB3GAP2Q9H2M9 1393 aa39.01■■■■□ 3.84
NPHP3-202ENST00000383282 SIRT1Q96EB6 747 aa38.99■■■■□ 3.83
NPHP3-202ENST00000383282 USP21Q9UK80 565 aa38.98■■■■□ 3.83
NPHP3-202ENST00000383282 MYOM2P54296 1465 aa38.98■■■■□ 3.83
NPHP3-202ENST00000383282 PXDNQ92626 1479 aa38.98■■■■□ 3.83
NPHP3-202ENST00000383282 DHX57Q6P158 1386 aaKnown RBP38.97■■■■□ 3.83
NPHP3-202ENST00000383282 COL22A1Q8NFW1 1626 aaPredicted RBP38.97■■■■□ 3.83
NPHP3-202ENST00000383282 XPCQ01831 940 aaPredicted RBP38.96■■■■□ 3.83
NPHP3-202ENST00000383282 NRXN1Q9ULB1 1477 aa38.96■■■■□ 3.83
NPHP3-202ENST00000383282 RGS12O14924 1447 aa38.96■■■■□ 3.83
NPHP3-202ENST00000383282 CFAP70Q5T0N1 1121 aa38.94■■■■□ 3.82
NPHP3-202ENST00000383282 TRPC5Q9UL62 973 aaPredicted RBP38.93■■■■□ 3.82
NPHP3-202ENST00000383282 FNBP4Q8N3X1 1017 aaPredicted RBP38.92■■■■□ 3.82
NPHP3-202ENST00000383282 FMN2Q9NZ56 1722 aa38.89■■■■□ 3.82
NPHP3-202ENST00000383282 KIF1AQ12756 1690 aa38.85■■■■□ 3.81
NPHP3-202ENST00000383282 PRAM1Q96QH2 718 aa38.84■■■■□ 3.81
NPHP3-202ENST00000383282 SAFB2Q14151 953 aaKnown RBP eCLIP38.81■■■■□ 3.8
NPHP3-202ENST00000383282 KRT28Q7Z3Y7 464 aa38.81■■■■□ 3.8
NPHP3-202ENST00000383282 POGKQ9P215 609 aa38.81■■■■□ 3.8
NPHP3-202ENST00000383282 SPATA31A3Q5VYP0 1347 aa38.81■■■■□ 3.8
NPHP3-202ENST00000383282 ATRNO75882 1429 aa38.8■■■■□ 3.8
NPHP3-202ENST00000383282 PHF8Q9UPP1 1060 aa38.8■■■■□ 3.8
NPHP3-202ENST00000383282 PSME1Q06323 249 aa38.77■■■■□ 3.8
NPHP3-202ENST00000383282 DLC1Q96QB1 1528 aa38.77■■■■□ 3.8
NPHP3-202ENST00000383282 ATAD2Q6PL18 1390 aa38.74■■■■□ 3.79
NPHP3-202ENST00000383282 HRCP23327 699 aa38.73■■■■□ 3.79
NPHP3-202ENST00000383282 KDM2AQ9Y2K7 1162 aa38.73■■■■□ 3.79
NPHP3-202ENST00000383282 BCL9LQ86UU0 1499 aa38.73■■■■□ 3.79
NPHP3-202ENST00000383282 DCAF11Q8TEB1 546 aa38.71■■■■□ 3.79
NPHP3-202ENST00000383282 STAC3Q96MF2 364 aa38.71■■■■□ 3.79
NPHP3-202ENST00000383282 MARF1Q9Y4F3 1742 aaKnown RBP38.71■■■■□ 3.79
NPHP3-202ENST00000383282 HAP1P54257 671 aaPredicted RBP38.7■■■■□ 3.79
NPHP3-202ENST00000383282 TNS3Q68CZ2 1445 aa38.7■■■■□ 3.79
NPHP3-202ENST00000383282 TRAK1Q9UPV9 953 aa38.69■■■■□ 3.78
NPHP3-202ENST00000383282 ADGRB1O14514 1584 aa38.69■■■■□ 3.78
NPHP3-202ENST00000383282 ANKARQ7Z5J8 1434 aa38.67■■■■□ 3.78
NPHP3-202ENST00000383282 GJD4Q96KN9 370 aaPredicted RBP38.66■■■■□ 3.78
NPHP3-202ENST00000383282 SBNO1A3KN83 1393 aa38.65■■■■□ 3.78
NPHP3-202ENST00000383282 RGPD8O14715 1765 aaPredicted RBP38.65■■■■□ 3.78
NPHP3-202ENST00000383282 UNC5CLQ8IV45 518 aa38.64■■■■□ 3.78
NPHP3-202ENST00000383282 LMOD2Q6P5Q4 547 aa38.63■■■■□ 3.77
NPHP3-202ENST00000383282 ADGRB2O60241 1585 aa38.62■■■■□ 3.77
NPHP3-202ENST00000383282 EIF3AQ14152 1382 aaKnown RBP38.62■■■■□ 3.77
NPHP3-202ENST00000383282 ARHGEF10O15013 1369 aa38.61■■■■□ 3.77
NPHP3-202ENST00000383282 PMFBP1Q8TBY8 1022 aa38.61■■■■□ 3.77
NPHP3-202ENST00000383282 SLIT2O94813 1529 aa38.61■■■■□ 3.77
NPHP3-202ENST00000383282 USP32Q8NFA0 1604 aa38.6■■■■□ 3.77
NPHP3-202ENST00000383282 HIRIP3Q9BW71 556 aaPredicted RBP38.6■■■■□ 3.77
NPHP3-202ENST00000383282 MINK1Q8N4C8 1332 aaPredicted RBP38.59■■■■□ 3.77
NPHP3-202ENST00000383282 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.58■■■■□ 3.77
NPHP3-202ENST00000383282 PLEKHG5O94827 1062 aa38.56■■■■□ 3.76
NPHP3-202ENST00000383282 CABLES1Q8TDN4 633 aa38.56■■■■□ 3.76
NPHP3-202ENST00000383282 WASLO00401 505 aaPredicted RBP38.52■■■■□ 3.76
NPHP3-202ENST00000383282 GPRASP1Q5JY77 1395 aa38.52■■■■□ 3.76
NPHP3-202ENST00000383282 RALGAPBQ86X10 1494 aa38.52■■■■□ 3.76
NPHP3-202ENST00000383282 TULP4Q9NRJ4 1543 aa38.5■■■■□ 3.75
NPHP3-202ENST00000383282 PRR36Q9H6K5 1346 aa38.47■■■■□ 3.75
NPHP3-202ENST00000383282 CCDC125Q86Z20 511 aa38.47■■■■□ 3.75
NPHP3-202ENST00000383282 GLI3P10071 1580 aa38.45■■■■□ 3.75
NPHP3-202ENST00000383282 VPS72Q15906 364 aa38.44■■■■□ 3.74
NPHP3-202ENST00000383282 NGDNQ8NEJ9 315 aaKnown RBP38.43■■■■□ 3.74
NPHP3-202ENST00000383282 CCDC9Q9Y3X0 531 aaKnown RBP38.43■■■■□ 3.74
NPHP3-202ENST00000383282 ABCA3Q99758 1704 aa38.41■■■■□ 3.74
NPHP3-202ENST00000383282 TRPM3Q9HCF6 1732 aaPredicted RBP38.38■■■■□ 3.74
NPHP3-202ENST00000383282 NWD2Q9ULI1 1742 aa38.38■■■■□ 3.74
NPHP3-202ENST00000383282 PLCH1Q4KWH8 1693 aa38.38■■■■□ 3.73
NPHP3-202ENST00000383282 EP400Q96L91 3159 aa38.37■■■■□ 3.73
NPHP3-202ENST00000383282 FAM83GA6ND36 823 aa38.37■■■■□ 3.73
NPHP3-202ENST00000383282 SEPT12Q8IYM1 358 aa38.36■■■■□ 3.73
NPHP3-202ENST00000383282 ARHGEF28Q8N1W1 1705 aaKnown RBP38.35■■■■□ 3.73
NPHP3-202ENST00000383282 PAK3O75914 559 aaPredicted RBP38.35■■■■□ 3.73
NPHP3-202ENST00000383282 NUDT16Q96DE0 195 aaKnown RBP38.33■■■■□ 3.73
NPHP3-202ENST00000383282 ALS2Q96Q42 1657 aa38.32■■■■□ 3.72
NPHP3-202ENST00000383282 ZRANB1Q9UGI0 708 aa38.31■■■■□ 3.72
NPHP3-202ENST00000383282 ATP7BP35670 1465 aa38.3■■■■□ 3.72
NPHP3-202ENST00000383282 BTG4Q9NY30 223 aa38.3■■■■□ 3.72
NPHP3-202ENST00000383282 ONECUT3O60422 494 aaPredicted RBP38.29■■■■□ 3.72
NPHP3-202ENST00000383282 BLMP54132 1417 aaPredicted RBP38.29■■■■□ 3.72
NPHP3-202ENST00000383282 CDK19Q9BWU1 502 aa38.28■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms