RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 SKIDA1Q1XH10 827 aa15.71■□□□□ 0.1
ABCA3-202ENST00000382381 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.1
ABCA3-202ENST00000382381 MYBBP1AQ9BQG0 1328 aaKnown RBP15.71■□□□□ 0.1
ABCA3-202ENST00000382381 CCDC27Q2M243 656 aa15.7■□□□□ 0.1
ABCA3-202ENST00000382381 CPLX2Q6PUV4 134 aaKnown RBP15.7■□□□□ 0.1
ABCA3-202ENST00000382381 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
ABCA3-202ENST00000382381 AMOTL1Q8IY63 956 aa15.7■□□□□ 0.1
ABCA3-202ENST00000382381 PHLDB1Q86UU1 1377 aa15.7■□□□□ 0.1
ABCA3-202ENST00000382381 ATP2B1P20020 1258 aa15.69■□□□□ 0.1
ABCA3-202ENST00000382381 STK11IPQ8N1F8 1099 aa15.69■□□□□ 0.1
ABCA3-202ENST00000382381 CWC22Q9HCG8 908 aaKnown RBP15.69■□□□□ 0.1
ABCA3-202ENST00000382381 NCOA2Q15596 1464 aa15.69■□□□□ 0.1
ABCA3-202ENST00000382381 ATP6V1DQ9Y5K8 247 aa15.69■□□□□ 0.1
ABCA3-202ENST00000382381 IPO7O95373 1038 aaKnown RBP15.69■□□□□ 0.1
ABCA3-202ENST00000382381 FGD6Q6ZV73 1430 aa15.68■□□□□ 0.1
ABCA3-202ENST00000382381 TRDNQ13061 729 aa15.68■□□□□ 0.1
ABCA3-202ENST00000382381 CCDC43Q96MW1 224 aaKnown RBP15.68■□□□□ 0.1
ABCA3-202ENST00000382381 PDE3BQ13370 1112 aa15.68■□□□□ 0.1
ABCA3-202ENST00000382381 WASHC4Q2M389 1173 aa15.68■□□□□ 0.1
ABCA3-202ENST00000382381 STRN4Q9NRL3 753 aa15.68■□□□□ 0.1
ABCA3-202ENST00000382381 G3BP1Q13283 466 aaKnown RBP eCLIP15.68■□□□□ 0.1
ABCA3-202ENST00000382381 RNF214Q8ND24 703 aa15.68■□□□□ 0.1
ABCA3-202ENST00000382381 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
ABCA3-202ENST00000382381 ZFYVE27Q5T4F4 411 aa15.67■□□□□ 0.1
ABCA3-202ENST00000382381 NLRP2Q9NX02 1062 aa15.67■□□□□ 0.1
ABCA3-202ENST00000382381 ANKRD50Q9ULJ7 1429 aa15.67■□□□□ 0.1
ABCA3-202ENST00000382381 E9PSI1 815 aa15.67■□□□□ 0.1
ABCA3-202ENST00000382381 THEMISQ8N1K5 641 aaPredicted RBP15.66■□□□□ 0.1
ABCA3-202ENST00000382381 SETQ01105 290 aaPredicted RBP15.66■□□□□ 0.1
ABCA3-202ENST00000382381 PANK1Q8TE04 598 aa15.66■□□□□ 0.1
ABCA3-202ENST00000382381 KIF21BO75037 1637 aa15.66■□□□□ 0.1
ABCA3-202ENST00000382381 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
ABCA3-202ENST00000382381 LAMC3Q9Y6N6 1575 aa15.65■□□□□ 0.1
ABCA3-202ENST00000382381 CCDC70Q6NSX1 233 aa15.65■□□□□ 0.1
ABCA3-202ENST00000382381 RUFY2Q8WXA3 655 aa15.65■□□□□ 0.1
ABCA3-202ENST00000382381 TSPYL4Q9UJ04 414 aa15.65■□□□□ 0.1
ABCA3-202ENST00000382381 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
ABCA3-202ENST00000382381 CASKIN1Q8WXD9 1431 aa15.65■□□□□ 0.1
ABCA3-202ENST00000382381 SMC3Q9UQE7 1217 aa15.65■□□□□ 0.1
ABCA3-202ENST00000382381 DZIP1LQ8IYY4 767 aaKnown RBP15.65■□□□□ 0.1
ABCA3-202ENST00000382381 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
ABCA3-202ENST00000382381 XPCQ01831 940 aaPredicted RBP15.64■□□□□ 0.09
ABCA3-202ENST00000382381 PDILTQ8N807 584 aa15.64■□□□□ 0.09
ABCA3-202ENST00000382381 CEBPAP49715 358 aaPredicted RBP15.64■□□□□ 0.09
ABCA3-202ENST00000382381 PRKRIP1Q9H875 184 aaPredicted RBP15.64■□□□□ 0.09
ABCA3-202ENST00000382381 NLRP6P59044 892 aa15.64■□□□□ 0.09
ABCA3-202ENST00000382381 CT47A1Q5JQC4 288 aaPredicted RBP15.64■□□□□ 0.09
ABCA3-202ENST00000382381 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.64■□□□□ 0.093e-6■■■■■ 56.1
ABCA3-202ENST00000382381 REC8O95072 547 aa15.64■□□□□ 0.09
ABCA3-202ENST00000382381 CFAP70Q5T0N1 1121 aa15.64■□□□□ 0.09
ABCA3-202ENST00000382381 CHMP4CQ96CF2 233 aa15.64■□□□□ 0.09
ABCA3-202ENST00000382381 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.09
ABCA3-202ENST00000382381 ERICH2A1L162 156 aa15.63■□□□□ 0.09
ABCA3-202ENST00000382381 RIC3Q7Z5B4 369 aa15.63■□□□□ 0.09
ABCA3-202ENST00000382381 MPNDQ8N594 471 aa15.63■□□□□ 0.09
ABCA3-202ENST00000382381 IKQ13123 557 aaPredicted RBP15.63■□□□□ 0.09
ABCA3-202ENST00000382381 PPP1R1BQ9UD71 204 aaPredicted RBP15.63■□□□□ 0.09
ABCA3-202ENST00000382381 LRRC9Q6ZRR7 1453 aa15.63■□□□□ 0.09
ABCA3-202ENST00000382381 RBM33Q96EV2 1170 aaKnown RBP15.63■□□□□ 0.09
ABCA3-202ENST00000382381 ANKLE2Q86XL3 938 aa15.63■□□□□ 0.09
ABCA3-202ENST00000382381 ABTB2Q8N961 1025 aa15.63■□□□□ 0.09
ABCA3-202ENST00000382381 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
ABCA3-202ENST00000382381 ZNF608Q9ULD9 1512 aaPredicted RBP15.62■□□□□ 0.09
ABCA3-202ENST00000382381 SASS6Q6UVJ0 657 aa15.62■□□□□ 0.09
ABCA3-202ENST00000382381 ANKRD20A12PQ8NF67 263 aa15.62■□□□□ 0.09
ABCA3-202ENST00000382381 DHX37Q8IY37 1157 aaKnown RBP15.62■□□□□ 0.09
ABCA3-202ENST00000382381 USP47Q96K76 1375 aa15.61■□□□□ 0.09
ABCA3-202ENST00000382381 CCDC47Q96A33 483 aaKnown RBP15.61■□□□□ 0.09
ABCA3-202ENST00000382381 CEBPZQ03701 1054 aaKnown RBP15.61■□□□□ 0.09
ABCA3-202ENST00000382381 GPS2Q13227 327 aa15.61■□□□□ 0.09
ABCA3-202ENST00000382381 DDX19BQ9UMR2 479 aa15.61■□□□□ 0.09
ABCA3-202ENST00000382381 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
ABCA3-202ENST00000382381 TOP2BQ02880 1626 aa15.6■□□□□ 0.09
ABCA3-202ENST00000382381 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
ABCA3-202ENST00000382381 CD109Q6YHK3 1445 aa15.6■□□□□ 0.09
ABCA3-202ENST00000382381 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
ABCA3-202ENST00000382381 C1orf115Q9H7X2 142 aa15.59■□□□□ 0.09
ABCA3-202ENST00000382381 DDX58O95786 925 aaKnown RBP15.59■□□□□ 0.09
ABCA3-202ENST00000382381 BRPF1P55201 1214 aaPredicted RBP15.59■□□□□ 0.09
ABCA3-202ENST00000382381 ODF2Q5BJF6 829 aa15.59■□□□□ 0.09
ABCA3-202ENST00000382381 RALYLQ86SE5 291 aaKnown RBP15.59■□□□□ 0.09
ABCA3-202ENST00000382381 FYCO1Q9BQS8 1478 aa15.59■□□□□ 0.09
ABCA3-202ENST00000382381 CDK13Q14004 1512 aaKnown RBP15.59■□□□□ 0.09
ABCA3-202ENST00000382381 LRRFIP1Q32MZ4 808 aaKnown RBP15.59■□□□□ 0.09
ABCA3-202ENST00000382381 RAPGEF4Q8WZA2 1011 aa15.59■□□□□ 0.09
ABCA3-202ENST00000382381 DNAJC2Q99543 621 aaKnown RBP15.58■□□□□ 0.09
ABCA3-202ENST00000382381 RRP12Q5JTH9 1297 aaKnown RBP15.58■□□□□ 0.08
ABCA3-202ENST00000382381 RNF20Q5VTR2 975 aa15.58■□□□□ 0.08
ABCA3-202ENST00000382381 POGZQ7Z3K3 1410 aa15.57■□□□□ 0.08
ABCA3-202ENST00000382381 CCDC73Q6ZRK6 1079 aa15.57■□□□□ 0.08
ABCA3-202ENST00000382381 OFD1O75665 1012 aa15.57■□□□□ 0.08
ABCA3-202ENST00000382381 MNS1Q8NEH6 495 aa15.56■□□□□ 0.08
ABCA3-202ENST00000382381 SDF4Q9BRK5 362 aa15.56■□□□□ 0.08
ABCA3-202ENST00000382381 SAFBQ15424 915 aaKnown RBP eCLIP15.56■□□□□ 0.08
ABCA3-202ENST00000382381 R3HCC1Q9Y3T6 440 aaKnown RBP15.56■□□□□ 0.08
ABCA3-202ENST00000382381 GPRASP1Q5JY77 1395 aa15.56■□□□□ 0.08
ABCA3-202ENST00000382381 RUFY1Q96T51 708 aa15.56■□□□□ 0.08
ABCA3-202ENST00000382381 RSPH6AQ9H0K4 717 aa15.56■□□□□ 0.08
ABCA3-202ENST00000382381 C22orf23Q9BZE7 217 aa15.55■□□□□ 0.08
ABCA3-202ENST00000382381 C9orf84Q5VXU9 1444 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms