RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 CDK12Q9NYV4 1490 aaPredicted RBP27.89■■■□□ 2.06
TMEM41A-202ENST00000382227 STK26Q9P289 416 aa27.89■■■□□ 2.06
TMEM41A-202ENST00000382227 TECPR2O15040 1411 aa27.89■■■□□ 2.06
TMEM41A-202ENST00000382227 LRPPRCP42704 1394 aaKnown RBP27.88■■■□□ 2.05
TMEM41A-202ENST00000382227 PIK3C2GO75747 1445 aa27.87■■■□□ 2.05
TMEM41A-202ENST00000382227 ADAMTS2O95450 1211 aa27.86■■■□□ 2.05
TMEM41A-202ENST00000382227 ESCO1Q5FWF5 840 aa27.86■■■□□ 2.05
TMEM41A-202ENST00000382227 ABCC11Q96J66 1382 aa27.86■■■□□ 2.05
TMEM41A-202ENST00000382227 TMEM132EQ6IEE7 984 aa27.85■■■□□ 2.05
TMEM41A-202ENST00000382227 WAPLQ7Z5K2 1190 aa27.85■■■□□ 2.05
TMEM41A-202ENST00000382227 UPF1Q92900 1129 aaKnown RBP eCLIP27.84■■■□□ 2.056e-8■■■■■ 28.8
TMEM41A-202ENST00000382227 NGLY1Q96IV0 654 aa27.84■■■□□ 2.05
TMEM41A-202ENST00000382227 QTRT2Q9H974 415 aaKnown RBP27.84■■■□□ 2.05
TMEM41A-202ENST00000382227 NPHP3Q7Z494 1330 aa27.83■■■□□ 2.05
TMEM41A-202ENST00000382227 RBM6P78332 1123 aaKnown RBP27.81■■■□□ 2.04
TMEM41A-202ENST00000382227 PLEKHH1Q9ULM0 1364 aa27.8■■■□□ 2.04
TMEM41A-202ENST00000382227 YTHDC2Q9H6S0 1430 aaKnown RBP27.8■■■□□ 2.04
TMEM41A-202ENST00000382227 KNDC1Q76NI1 1749 aa27.8■■■□□ 2.04
TMEM41A-202ENST00000382227 COL22A1Q8NFW1 1626 aaPredicted RBP27.78■■■□□ 2.04
TMEM41A-202ENST00000382227 PXDNQ92626 1479 aa27.78■■■□□ 2.04
TMEM41A-202ENST00000382227 FOXO3O43524 673 aa27.78■■■□□ 2.04
TMEM41A-202ENST00000382227 NUTM2FA1L443 756 aa27.77■■■□□ 2.04
TMEM41A-202ENST00000382227 C14orf93Q9H972 538 aaKnown RBP27.77■■■□□ 2.04
TMEM41A-202ENST00000382227 RGS12O14924 1447 aa27.76■■■□□ 2.04
TMEM41A-202ENST00000382227 NRXN1Q9ULB1 1477 aa27.76■■■□□ 2.03
TMEM41A-202ENST00000382227 SIRT1Q96EB6 747 aa27.75■■■□□ 2.03
TMEM41A-202ENST00000382227 RAB3GAP2Q9H2M9 1393 aa27.74■■■□□ 2.03
TMEM41A-202ENST00000382227 XPCQ01831 940 aaPredicted RBP27.74■■■□□ 2.03
TMEM41A-202ENST00000382227 USP21Q9UK80 565 aa27.74■■■□□ 2.03
TMEM41A-202ENST00000382227 MYOM2P54296 1465 aa27.74■■■□□ 2.03
TMEM41A-202ENST00000382227 FNBP4Q8N3X1 1017 aaPredicted RBP27.73■■■□□ 2.03
TMEM41A-202ENST00000382227 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
TMEM41A-202ENST00000382227 FMN2Q9NZ56 1722 aa27.71■■■□□ 2.03
TMEM41A-202ENST00000382227 DHX57Q6P158 1386 aaKnown RBP27.71■■■□□ 2.03
TMEM41A-202ENST00000382227 TRPC5Q9UL62 973 aaPredicted RBP27.7■■■□□ 2.02
TMEM41A-202ENST00000382227 KIF1AQ12756 1690 aa27.66■■■□□ 2.02
TMEM41A-202ENST00000382227 ATRNO75882 1429 aa27.65■■■□□ 2.02
TMEM41A-202ENST00000382227 PRAM1Q96QH2 718 aa27.63■■■□□ 2.01
TMEM41A-202ENST00000382227 SPATA31A3Q5VYP0 1347 aa27.63■■■□□ 2.01
TMEM41A-202ENST00000382227 KRT28Q7Z3Y7 464 aa27.61■■■□□ 2.01
TMEM41A-202ENST00000382227 BCL9LQ86UU0 1499 aa27.61■■■□□ 2.01
TMEM41A-202ENST00000382227 MARF1Q9Y4F3 1742 aaKnown RBP27.61■■■□□ 2.01
TMEM41A-202ENST00000382227 SAFB2Q14151 953 aaKnown RBP eCLIP27.6■■■□□ 2.01
TMEM41A-202ENST00000382227 PHF8Q9UPP1 1060 aa27.6■■■□□ 2.01
TMEM41A-202ENST00000382227 DLC1Q96QB1 1528 aa27.59■■■□□ 2.01
TMEM41A-202ENST00000382227 POGKQ9P215 609 aa27.58■■■□□ 2.01
TMEM41A-202ENST00000382227 ATAD2Q6PL18 1390 aa27.58■■■□□ 2.01
TMEM41A-202ENST00000382227 ADGRB1O14514 1584 aa27.56■■■□□ 2
TMEM41A-202ENST00000382227 RGPD8O14715 1765 aaPredicted RBP27.55■■■□□ 2
TMEM41A-202ENST00000382227 PSME1Q06323 249 aa27.55■■■□□ 2
TMEM41A-202ENST00000382227 TNS3Q68CZ2 1445 aa27.53■■■□□ 2
TMEM41A-202ENST00000382227 DCAF11Q8TEB1 546 aa27.53■■■□□ 2
TMEM41A-202ENST00000382227 KDM2AQ9Y2K7 1162 aa27.53■■■□□ 2
TMEM41A-202ENST00000382227 ANKARQ7Z5J8 1434 aa27.52■■■□□ 2
TMEM41A-202ENST00000382227 HRCP23327 699 aa27.52■■■□□ 2
TMEM41A-202ENST00000382227 GJD4Q96KN9 370 aaPredicted RBP27.52■■■□□ 2
TMEM41A-202ENST00000382227 SBNO1A3KN83 1393 aa27.51■■□□□ 1.99
TMEM41A-202ENST00000382227 TRAK1Q9UPV9 953 aa27.51■■□□□ 1.99
TMEM41A-202ENST00000382227 ADGRB2O60241 1585 aa27.51■■□□□ 1.99
TMEM41A-202ENST00000382227 SLIT2O94813 1529 aa27.51■■□□□ 1.99
TMEM41A-202ENST00000382227 USP32Q8NFA0 1604 aa27.5■■□□□ 1.99
TMEM41A-202ENST00000382227 UNC5CLQ8IV45 518 aa27.5■■□□□ 1.99
TMEM41A-202ENST00000382227 STAC3Q96MF2 364 aa27.5■■□□□ 1.99
TMEM41A-202ENST00000382227 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.49■■□□□ 1.99
TMEM41A-202ENST00000382227 HAP1P54257 671 aaPredicted RBP27.48■■□□□ 1.99
TMEM41A-202ENST00000382227 PMFBP1Q8TBY8 1022 aa27.47■■□□□ 1.99
TMEM41A-202ENST00000382227 CABLES1Q8TDN4 633 aa27.47■■□□□ 1.99
TMEM41A-202ENST00000382227 HIRIP3Q9BW71 556 aaPredicted RBP27.47■■□□□ 1.99
TMEM41A-202ENST00000382227 ARHGEF10O15013 1369 aa27.47■■□□□ 1.99
TMEM41A-202ENST00000382227 LMOD2Q6P5Q4 547 aa27.46■■□□□ 1.99
TMEM41A-202ENST00000382227 MINK1Q8N4C8 1332 aaPredicted RBP27.44■■□□□ 1.98
TMEM41A-202ENST00000382227 EIF3AQ14152 1382 aaKnown RBP27.44■■□□□ 1.98
TMEM41A-202ENST00000382227 RALGAPBQ86X10 1494 aa27.44■■□□□ 1.98
TMEM41A-202ENST00000382227 PLEKHG5O94827 1062 aa27.43■■□□□ 1.98
TMEM41A-202ENST00000382227 GLI3P10071 1580 aa27.42■■□□□ 1.98
TMEM41A-202ENST00000382227 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
TMEM41A-202ENST00000382227 WASLO00401 505 aaPredicted RBP27.4■■□□□ 1.98
TMEM41A-202ENST00000382227 TULP4Q9NRJ4 1543 aa27.4■■□□□ 1.98
TMEM41A-202ENST00000382227 ABCA3Q99758 1704 aa27.39■■□□□ 1.98
TMEM41A-202ENST00000382227 GPRASP1Q5JY77 1395 aa27.38■■□□□ 1.97
TMEM41A-202ENST00000382227 CCDC125Q86Z20 511 aa27.38■■□□□ 1.97
TMEM41A-202ENST00000382227 VPS72Q15906 364 aa27.37■■□□□ 1.97
TMEM41A-202ENST00000382227 TRPM3Q9HCF6 1732 aaPredicted RBP27.36■■□□□ 1.97
TMEM41A-202ENST00000382227 PLCH1Q4KWH8 1693 aa27.35■■□□□ 1.97
TMEM41A-202ENST00000382227 NWD2Q9ULI1 1742 aa27.35■■□□□ 1.97
TMEM41A-202ENST00000382227 FAM83GA6ND36 823 aa27.34■■□□□ 1.97
TMEM41A-202ENST00000382227 NGDNQ8NEJ9 315 aaKnown RBP27.32■■□□□ 1.96
TMEM41A-202ENST00000382227 CCDC9Q9Y3X0 531 aaKnown RBP27.32■■□□□ 1.96
TMEM41A-202ENST00000382227 ALS2Q96Q42 1657 aa27.32■■□□□ 1.96
TMEM41A-202ENST00000382227 ARHGEF28Q8N1W1 1705 aaKnown RBP27.32■■□□□ 1.96
TMEM41A-202ENST00000382227 SEPT12Q8IYM1 358 aa27.31■■□□□ 1.96
TMEM41A-202ENST00000382227 ONECUT3O60422 494 aaPredicted RBP27.29■■□□□ 1.96
TMEM41A-202ENST00000382227 ATP7BP35670 1465 aa27.27■■□□□ 1.96
TMEM41A-202ENST00000382227 NUDT16Q96DE0 195 aaKnown RBP27.27■■□□□ 1.96
TMEM41A-202ENST00000382227 EP400Q96L91 3159 aa27.27■■□□□ 1.96
TMEM41A-202ENST00000382227 BLMP54132 1417 aaPredicted RBP27.26■■□□□ 1.95
TMEM41A-202ENST00000382227 BRWD3Q6RI45 1802 aa27.26■■□□□ 1.95
TMEM41A-202ENST00000382227 PAK3O75914 559 aaPredicted RBP27.26■■□□□ 1.95
TMEM41A-202ENST00000382227 ZRANB1Q9UGI0 708 aa27.26■■□□□ 1.95
TMEM41A-202ENST00000382227 BTG4Q9NY30 223 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms