RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 E9PCH4 1651 aa11.15□□□□□ -0.63
FAM49A-201ENST00000381323 RBM6P78332 1123 aaKnown RBP11.14□□□□□ -0.63
FAM49A-201ENST00000381323 DIP2AQ14689 1571 aa11.14□□□□□ -0.63
FAM49A-201ENST00000381323 EVA1CP58658 441 aa11.13□□□□□ -0.63
FAM49A-201ENST00000381323 TMEM131LA2VDJ0 1609 aa11.13□□□□□ -0.63
FAM49A-201ENST00000381323 EIF3AQ14152 1382 aaKnown RBP11.13□□□□□ -0.63
FAM49A-201ENST00000381323 ROBO2Q9HCK4 1378 aa11.12□□□□□ -0.63
FAM49A-201ENST00000381323 C14orf93Q9H972 538 aaKnown RBP11.12□□□□□ -0.63
FAM49A-201ENST00000381323 DCCP43146 1447 aa11.12□□□□□ -0.63
FAM49A-201ENST00000381323 PRDM11Q9NQV5 511 aa11.11□□□□□ -0.63
FAM49A-201ENST00000381323 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
FAM49A-201ENST00000381323 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
FAM49A-201ENST00000381323 KDM5AP29375 1690 aaKnown RBP11.1□□□□□ -0.63
FAM49A-201ENST00000381323 SPHKAPQ2M3C7 1700 aa11.1□□□□□ -0.63
FAM49A-201ENST00000381323 KIF1BO60333 1816 aa11.09□□□□□ -0.63
FAM49A-201ENST00000381323 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
FAM49A-201ENST00000381323 HRCP23327 699 aa11.09□□□□□ -0.63
FAM49A-201ENST00000381323 C1orf167Q5SNV9 1468 aa11.08□□□□□ -0.64
FAM49A-201ENST00000381323 YTHDC2Q9H6S0 1430 aaKnown RBP11.08□□□□□ -0.64
FAM49A-201ENST00000381323 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
FAM49A-201ENST00000381323 ABCC11Q96J66 1382 aa11.08□□□□□ -0.64
FAM49A-201ENST00000381323 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
FAM49A-201ENST00000381323 CABLES1Q8TDN4 633 aa11.07□□□□□ -0.64
FAM49A-201ENST00000381323 STRN4Q9NRL3 753 aa11.07□□□□□ -0.64
FAM49A-201ENST00000381323 SOX12O15370 315 aa11.07□□□□□ -0.64
FAM49A-201ENST00000381323 NUTM2GQ5VZR2 741 aa11.07□□□□□ -0.64
FAM49A-201ENST00000381323 POLR3GLQ9BT43 218 aa11.07□□□□□ -0.64
FAM49A-201ENST00000381323 CLTCL1P53675 1640 aa11.07□□□□□ -0.64
FAM49A-201ENST00000381323 MST1RQ04912 1400 aa11.07□□□□□ -0.64
FAM49A-201ENST00000381323 PHLPP1O60346 1717 aa11.06□□□□□ -0.64
FAM49A-201ENST00000381323 USP35Q9P2H5 1018 aa11.06□□□□□ -0.64
FAM49A-201ENST00000381323 CSB-PGBD3P0DP91 1061 aa11.06□□□□□ -0.64
FAM49A-201ENST00000381323 PTCH1Q13635 1447 aa11.06□□□□□ -0.64
FAM49A-201ENST00000381323 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
FAM49A-201ENST00000381323 ABTB2Q8N961 1025 aa11.05□□□□□ -0.64
FAM49A-201ENST00000381323 MYO5BQ9ULV0 1848 aa11.04□□□□□ -0.64
FAM49A-201ENST00000381323 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
FAM49A-201ENST00000381323 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
FAM49A-201ENST00000381323 PNPLA6Q8IY17 1366 aa11.04□□□□□ -0.64
FAM49A-201ENST00000381323 TRIM26Q12899 539 aaPredicted RBP11.04□□□□□ -0.64
FAM49A-201ENST00000381323 CDK19Q9BWU1 502 aa11.04□□□□□ -0.64
FAM49A-201ENST00000381323 RGS17Q9UGC6 210 aaPredicted RBP11.04□□□□□ -0.64
FAM49A-201ENST00000381323 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
FAM49A-201ENST00000381323 ARHGEF10O15013 1369 aa11.04□□□□□ -0.64
FAM49A-201ENST00000381323 ALKQ9UM73 1620 aa11.04□□□□□ -0.64
FAM49A-201ENST00000381323 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
FAM49A-201ENST00000381323 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
FAM49A-201ENST00000381323 SOS2Q07890 1332 aaPredicted RBP11.03□□□□□ -0.64
FAM49A-201ENST00000381323 CENPJQ9HC77 1338 aaPredicted RBP11.03□□□□□ -0.64
FAM49A-201ENST00000381323 NEXMIFQ5QGS0 1516 aa11.03□□□□□ -0.64
FAM49A-201ENST00000381323 PLEKHH1Q9ULM0 1364 aa11.03□□□□□ -0.64
FAM49A-201ENST00000381323 ASXL1Q8IXJ9 1541 aa11.03□□□□□ -0.64
FAM49A-201ENST00000381323 ZC3H6P61129 1189 aaKnown RBP11.03□□□□□ -0.64
FAM49A-201ENST00000381323 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
FAM49A-201ENST00000381323 SIN3AQ96ST3 1273 aa11.03□□□□□ -0.64
FAM49A-201ENST00000381323 PDE3BQ13370 1112 aa11.02□□□□□ -0.64
FAM49A-201ENST00000381323 UNC5CLQ8IV45 518 aa11.02□□□□□ -0.64
FAM49A-201ENST00000381323 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.64
FAM49A-201ENST00000381323 STRCP1A6NGW2 1772 aa11.02□□□□□ -0.64
FAM49A-201ENST00000381323 NLRP13Q86W25 1043 aa11.02□□□□□ -0.65
FAM49A-201ENST00000381323 EVC2Q86UK5 1308 aa11.01□□□□□ -0.65
FAM49A-201ENST00000381323 ATAD2Q6PL18 1390 aa11.01□□□□□ -0.65
FAM49A-201ENST00000381323 ROCK2O75116 1388 aaKnown RBP11.01□□□□□ -0.65
FAM49A-201ENST00000381323 BTG4Q9NY30 223 aa11.01□□□□□ -0.65
FAM49A-201ENST00000381323 CHD2O14647 1828 aaKnown RBP11.01□□□□□ -0.65
FAM49A-201ENST00000381323 NLRP6P59044 892 aa11□□□□□ -0.65
FAM49A-201ENST00000381323 GJD4Q96KN9 370 aaPredicted RBP11□□□□□ -0.65
FAM49A-201ENST00000381323 SPATA31A3Q5VYP0 1347 aa11□□□□□ -0.65
FAM49A-201ENST00000381323 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
FAM49A-201ENST00000381323 SIPA1L2Q9P2F8 1722 aaPredicted RBP11□□□□□ -0.65
FAM49A-201ENST00000381323 CABP2Q9NPB3 220 aa11□□□□□ -0.65
FAM49A-201ENST00000381323 CCER1Q8TC90 406 aaPredicted RBP10.99□□□□□ -0.65
FAM49A-201ENST00000381323 SPATA31E1Q6ZUB1 1445 aa10.99□□□□□ -0.65
FAM49A-201ENST00000381323 BAG6P46379 1132 aa10.99□□□□□ -0.65
FAM49A-201ENST00000381323 HDGFL2Q7Z4V5 671 aaPredicted RBP10.99□□□□□ -0.65
FAM49A-201ENST00000381323 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
FAM49A-201ENST00000381323 UPF1Q92900 1129 aaKnown RBP eCLIP10.98□□□□□ -0.65
FAM49A-201ENST00000381323 CHRNA2Q15822 529 aa10.98□□□□□ -0.65
FAM49A-201ENST00000381323 SEPT12Q8IYM1 358 aa10.97□□□□□ -0.65
FAM49A-201ENST00000381323 PIK3C2GO75747 1445 aa10.97□□□□□ -0.65
FAM49A-201ENST00000381323 DCAF8L1A6NGE4 600 aa10.97□□□□□ -0.65
FAM49A-201ENST00000381323 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
FAM49A-201ENST00000381323 KRT27Q7Z3Y8 459 aa10.96□□□□□ -0.65
FAM49A-201ENST00000381323 SLC24A1O60721 1099 aa10.96□□□□□ -0.66
FAM49A-201ENST00000381323 TOM1L2Q6ZVM7 507 aa10.95□□□□□ -0.66
FAM49A-201ENST00000381323 ACEP12821 1306 aa10.95□□□□□ -0.66
FAM49A-201ENST00000381323 NBPF8Q3BBV2 869 aa10.95□□□□□ -0.66
FAM49A-201ENST00000381323 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
FAM49A-201ENST00000381323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
FAM49A-201ENST00000381323 FNBP4Q8N3X1 1017 aaPredicted RBP10.95□□□□□ -0.66
FAM49A-201ENST00000381323 CABP1Q9NZU7 370 aa10.95□□□□□ -0.66
FAM49A-201ENST00000381323 TNS3Q68CZ2 1445 aa10.94□□□□□ -0.66
FAM49A-201ENST00000381323 TERF2IPQ9NYB0 399 aa10.94□□□□□ -0.66
FAM49A-201ENST00000381323 AHDC1Q5TGY3 1603 aaPredicted RBP10.94□□□□□ -0.66
FAM49A-201ENST00000381323 ZNF692Q9BU19 519 aaPredicted RBP10.93□□□□□ -0.66
FAM49A-201ENST00000381323 MYOM2P54296 1465 aa10.92□□□□□ -0.66
FAM49A-201ENST00000381323 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
FAM49A-201ENST00000381323 LRP6O75581 1613 aa10.92□□□□□ -0.66
FAM49A-201ENST00000381323 VPS72Q15906 364 aa10.92□□□□□ -0.66
FAM49A-201ENST00000381323 ANKARQ7Z5J8 1434 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms