RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 KCNA6P17658 529 aa28.33■■■□□ 2.13
TSSC4-203ENST00000380996 PLEKHH1Q9ULM0 1364 aa28.32■■■□□ 2.12
TSSC4-203ENST00000380996 MINK1Q8N4C8 1332 aaPredicted RBP28.31■■■□□ 2.12
TSSC4-203ENST00000380996 PUS7Q96PZ0 661 aaKnown RBP28.3■■■□□ 2.12
TSSC4-203ENST00000380996 DMRT2Q9Y5R5 561 aa28.29■■■□□ 2.12
TSSC4-203ENST00000380996 XRN1Q8IZH2 1706 aaKnown RBP28.29■■■□□ 2.12
TSSC4-203ENST00000380996 STRCQ7RTU9 1775 aa28.27■■■□□ 2.12
TSSC4-203ENST00000380996 CHD2O14647 1828 aaKnown RBP28.26■■■□□ 2.11
TSSC4-203ENST00000380996 TULP4Q9NRJ4 1543 aa28.23■■■□□ 2.11
TSSC4-203ENST00000380996 SRPK2P78362 688 aaKnown RBP28.23■■■□□ 2.11
TSSC4-203ENST00000380996 NWD1Q149M9 1564 aa28.21■■■□□ 2.11
TSSC4-203ENST00000380996 CDK19Q9BWU1 502 aa28.21■■■□□ 2.11
TSSC4-203ENST00000380996 WASLO00401 505 aaPredicted RBP28.2■■■□□ 2.1
TSSC4-203ENST00000380996 CABP2Q9NPB3 220 aa28.18■■■□□ 2.1
TSSC4-203ENST00000380996 NKTRP30414 1462 aaKnown RBP28.18■■■□□ 2.1
TSSC4-203ENST00000380996 ATAD2Q6PL18 1390 aa28.17■■■□□ 2.1
TSSC4-203ENST00000380996 PROSER2Q86WR7 435 aaPredicted RBP28.16■■■□□ 2.1
TSSC4-203ENST00000380996 ADGRB2O60241 1585 aa28.14■■■□□ 2.1
TSSC4-203ENST00000380996 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.13■■■□□ 2.09
TSSC4-203ENST00000380996 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
TSSC4-203ENST00000380996 TMC1Q8TDI8 760 aa28.12■■■□□ 2.09
TSSC4-203ENST00000380996 PANK3Q9H999 370 aa28.1■■■□□ 2.09
TSSC4-203ENST00000380996 C14orf37Q86TY3 774 aa28.09■■■□□ 2.09
TSSC4-203ENST00000380996 ADGRL3Q9HAR2 1447 aa28.07■■■□□ 2.08
TSSC4-203ENST00000380996 NCOA3Q9Y6Q9 1424 aa28.07■■■□□ 2.08
TSSC4-203ENST00000380996 NUDT16Q96DE0 195 aaKnown RBP28.07■■■□□ 2.08
TSSC4-203ENST00000380996 SLC12A5Q9H2X9 1139 aa28.07■■■□□ 2.08
TSSC4-203ENST00000380996 RBM33Q96EV2 1170 aaKnown RBP28.06■■■□□ 2.08
TSSC4-203ENST00000380996 CCDC61Q9Y6R9 512 aa28.05■■■□□ 2.08
TSSC4-203ENST00000380996 ZNF335Q9H4Z2 1342 aaPredicted RBP28.05■■■□□ 2.08
TSSC4-203ENST00000380996 ANP32CO43423 234 aa28.04■■■□□ 2.08
TSSC4-203ENST00000380996 MYOM1P52179 1685 aa28.03■■■□□ 2.08
TSSC4-203ENST00000380996 TMEM94Q12767 1356 aa28.03■■■□□ 2.08
TSSC4-203ENST00000380996 C19orf44Q9H6X5 657 aa28.02■■■□□ 2.08
TSSC4-203ENST00000380996 TERF2IPQ9NYB0 399 aa28.02■■■□□ 2.08
TSSC4-203ENST00000380996 CABP1Q9NZU7 370 aa28.02■■■□□ 2.08
TSSC4-203ENST00000380996 PER1O15534 1290 aaPredicted RBP28.01■■■□□ 2.07
TSSC4-203ENST00000380996 KNSTRNQ9Y448 316 aa28.01■■■□□ 2.07
TSSC4-203ENST00000380996 CDC42BPGQ6DT37 1551 aa28■■■□□ 2.07
TSSC4-203ENST00000380996 STRCP1A6NGW2 1772 aa28■■■□□ 2.07
TSSC4-203ENST00000380996 ANKRD36BQ8N2N9 1353 aa27.99■■■□□ 2.07
TSSC4-203ENST00000380996 ATP7BP35670 1465 aa27.99■■■□□ 2.07
TSSC4-203ENST00000380996 PRR36Q9H6K5 1346 aa27.99■■■□□ 2.07
TSSC4-203ENST00000380996 ANKARQ7Z5J8 1434 aa27.98■■■□□ 2.07
TSSC4-203ENST00000380996 PPIP5K1Q6PFW1 1433 aa27.98■■■□□ 2.07
TSSC4-203ENST00000380996 NALCNQ8IZF0 1738 aa27.98■■■□□ 2.07
TSSC4-203ENST00000380996 HDGFL2Q7Z4V5 671 aaPredicted RBP27.97■■■□□ 2.07
TSSC4-203ENST00000380996 NUTM2FA1L443 756 aa27.97■■■□□ 2.07
TSSC4-203ENST00000380996 MIER1Q8N108 512 aa27.96■■■□□ 2.07
TSSC4-203ENST00000380996 PLEKHG3A1L390 1219 aa27.93■■■□□ 2.06
TSSC4-203ENST00000380996 ATF3P18847 181 aa27.93■■■□□ 2.06
TSSC4-203ENST00000380996 LRRC7Q96NW7 1537 aa27.93■■■□□ 2.06
TSSC4-203ENST00000380996 DCCP43146 1447 aa27.93■■■□□ 2.06
TSSC4-203ENST00000380996 MSH6P52701 1360 aa27.92■■■□□ 2.06
TSSC4-203ENST00000380996 CARD14Q9BXL6 1004 aa27.92■■■□□ 2.06
TSSC4-203ENST00000380996 A0A1W2PP64 1363 aa27.92■■■□□ 2.06
TSSC4-203ENST00000380996 FMN2Q9NZ56 1722 aa27.91■■■□□ 2.06
TSSC4-203ENST00000380996 CADPS2Q86UW7 1296 aa27.9■■■□□ 2.06
TSSC4-203ENST00000380996 ZNF692Q9BU19 519 aaPredicted RBP27.9■■■□□ 2.06
TSSC4-203ENST00000380996 NSD3Q9BZ95 1437 aa27.9■■■□□ 2.06
TSSC4-203ENST00000380996 PRKRIP1Q9H875 184 aaPredicted RBP27.89■■■□□ 2.06
TSSC4-203ENST00000380996 CD163L1Q9NR16 1453 aa27.89■■■□□ 2.06
TSSC4-203ENST00000380996 KTN1Q86UP2 1357 aaKnown RBP27.89■■■□□ 2.05
TSSC4-203ENST00000380996 NPC1L1Q9UHC9 1359 aa27.88■■■□□ 2.05
TSSC4-203ENST00000380996 CPSF1Q10570 1443 aaKnown RBP27.87■■■□□ 2.05
TSSC4-203ENST00000380996 USP32Q8NFA0 1604 aa27.87■■■□□ 2.05
TSSC4-203ENST00000380996 AMER1Q5JTC6 1135 aaPredicted RBP27.87■■■□□ 2.05
TSSC4-203ENST00000380996 CGNL1Q0VF96 1302 aa27.86■■■□□ 2.05
TSSC4-203ENST00000380996 RALBP1Q15311 655 aa27.86■■■□□ 2.05
TSSC4-203ENST00000380996 TOPAZ1Q8N9V7 1692 aa27.86■■■□□ 2.05
TSSC4-203ENST00000380996 ITSN1Q15811 1721 aa27.85■■■□□ 2.05
TSSC4-203ENST00000380996 ACEP12821 1306 aa27.84■■■□□ 2.05
TSSC4-203ENST00000380996 CNGB1Q14028 1251 aaPredicted RBP27.84■■■□□ 2.05
TSSC4-203ENST00000380996 NGDNQ8NEJ9 315 aaKnown RBP27.84■■■□□ 2.05
TSSC4-203ENST00000380996 CC2D1BQ5T0F9 858 aaKnown RBP27.83■■■□□ 2.05
TSSC4-203ENST00000380996 ESCO1Q5FWF5 840 aa27.82■■■□□ 2.04
TSSC4-203ENST00000380996 PMFBP1Q8TBY8 1022 aa27.82■■■□□ 2.04
TSSC4-203ENST00000380996 PHF8Q9UPP1 1060 aa27.82■■■□□ 2.04
TSSC4-203ENST00000380996 POLR3AO14802 1390 aaPredicted RBP27.81■■■□□ 2.04
TSSC4-203ENST00000380996 EDC4Q6P2E9 1401 aaKnown RBP27.8■■■□□ 2.04
TSSC4-203ENST00000380996 C1orf167Q5SNV9 1468 aa27.8■■■□□ 2.04
TSSC4-203ENST00000380996 NSD2O96028 1365 aa27.79■■■□□ 2.04
TSSC4-203ENST00000380996 MST1RQ04912 1400 aa27.78■■■□□ 2.04
TSSC4-203ENST00000380996 PARD3Q8TEW0 1356 aa27.78■■■□□ 2.04
TSSC4-203ENST00000380996 CCER2I3L3R5 266 aa27.77■■■□□ 2.04
TSSC4-203ENST00000380996 XIRP1Q702N8 1843 aaKnown RBP27.77■■■□□ 2.04
TSSC4-203ENST00000380996 LTBP4Q8N2S1 1624 aa27.77■■■□□ 2.04
TSSC4-203ENST00000380996 CERKQ8TCT0 537 aa27.77■■■□□ 2.04
TSSC4-203ENST00000380996 RGPD8O14715 1765 aaPredicted RBP27.75■■■□□ 2.03
TSSC4-203ENST00000380996 USP6P35125 1406 aa27.75■■■□□ 2.03
TSSC4-203ENST00000380996 ILDR1Q86SU0 546 aaPredicted RBP27.74■■■□□ 2.03
TSSC4-203ENST00000380996 ORAI2Q96SN7 254 aa27.74■■■□□ 2.03
TSSC4-203ENST00000380996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.73■■■□□ 2.03
TSSC4-203ENST00000380996 MYBBP1AQ9BQG0 1328 aaKnown RBP27.72■■■□□ 2.03
TSSC4-203ENST00000380996 BRD4O60885 1362 aaPredicted RBP27.72■■■□□ 2.03
TSSC4-203ENST00000380996 AKAP12Q02952 1782 aa27.72■■■□□ 2.03
TSSC4-203ENST00000380996 FYB1O15117 783 aa27.72■■■□□ 2.03
TSSC4-203ENST00000380996 MORC1Q86VD1 984 aa27.72■■■□□ 2.03
TSSC4-203ENST00000380996 TTC21BQ7Z4L5 1316 aa27.71■■■□□ 2.03
TSSC4-203ENST00000380996 SLAIN2Q9P270 581 aa27.71■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms