RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 ZC3H13Q5T200 1668 aaKnown RBP15.8■□□□□ 0.12
RFC3-201ENST00000380071 ABCC3O15438 1527 aa15.8■□□□□ 0.12
RFC3-201ENST00000380071 MTHFSP49914 203 aa15.8■□□□□ 0.12
RFC3-201ENST00000380071 NGEFQ8N5V2 710 aa15.8■□□□□ 0.12
RFC3-201ENST00000380071 HECW2Q9P2P5 1572 aa15.8■□□□□ 0.12
RFC3-201ENST00000380071 RGS3P49796 1198 aa15.79■□□□□ 0.12
RFC3-201ENST00000380071 SHPRHQ149N8 1683 aa15.78■□□□□ 0.12
RFC3-201ENST00000380071 SIGLEC1Q9BZZ2 1709 aa15.78■□□□□ 0.12
RFC3-201ENST00000380071 IGHDP01880 384 aa15.78■□□□□ 0.12
RFC3-201ENST00000380071 C8orf34Q49A92 452 aa15.78■□□□□ 0.12
RFC3-201ENST00000380071 TCP11L2Q8N4U5 519 aa15.78■□□□□ 0.12
RFC3-201ENST00000380071 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
RFC3-201ENST00000380071 CFAP74Q9C0B2 1584 aa15.77■□□□□ 0.12
RFC3-201ENST00000380071 SAFB2Q14151 953 aaKnown RBP eCLIP15.77■□□□□ 0.12
RFC3-201ENST00000380071 RTL5Q5HYW3 569 aaPredicted RBP15.77■□□□□ 0.12
RFC3-201ENST00000380071 CABP2Q9NPB3 220 aa15.77■□□□□ 0.11
RFC3-201ENST00000380071 CGNL1Q0VF96 1302 aa15.76■□□□□ 0.11
RFC3-201ENST00000380071 VGFO15240 615 aaPredicted RBP15.76■□□□□ 0.11
RFC3-201ENST00000380071 FAM161AQ3B820 660 aa15.76■□□□□ 0.11
RFC3-201ENST00000380071 PANK1Q8TE04 598 aa15.76■□□□□ 0.11
RFC3-201ENST00000380071 IDI1Q13907 227 aa15.76■□□□□ 0.11
RFC3-201ENST00000380071 EVC2Q86UK5 1308 aa15.75■□□□□ 0.11
RFC3-201ENST00000380071 COG6Q9Y2V7 657 aa15.75■□□□□ 0.11
RFC3-201ENST00000380071 CAMSAP1Q5T5Y3 1602 aa15.75■□□□□ 0.11
RFC3-201ENST00000380071 GLI2P10070 1586 aa15.75■□□□□ 0.11
RFC3-201ENST00000380071 SLC4A3P48751 1232 aa15.74■□□□□ 0.11
RFC3-201ENST00000380071 PDE3AQ14432 1141 aa15.74■□□□□ 0.11
RFC3-201ENST00000380071 FRAT1Q92837 279 aaPredicted RBP15.74■□□□□ 0.11
RFC3-201ENST00000380071 CANXP27824 592 aaKnown RBP15.74■□□□□ 0.11
RFC3-201ENST00000380071 DDRGK1Q96HY6 314 aa15.74■□□□□ 0.11
RFC3-201ENST00000380071 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
RFC3-201ENST00000380071 PHF23Q9BUL5 403 aaPredicted RBP15.73■□□□□ 0.11
RFC3-201ENST00000380071 STK26Q9P289 416 aa15.73■□□□□ 0.11
RFC3-201ENST00000380071 NEXMIFQ5QGS0 1516 aa15.73■□□□□ 0.11
RFC3-201ENST00000380071 NEFMP07197 916 aa15.72■□□□□ 0.11
RFC3-201ENST00000380071 RARSP54136 660 aaKnown RBP15.72■□□□□ 0.11
RFC3-201ENST00000380071 PIK3C2BO00750 1634 aa15.72■□□□□ 0.11
RFC3-201ENST00000380071 IQSEC2Q5JU85 1478 aa15.72■□□□□ 0.11
RFC3-201ENST00000380071 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
RFC3-201ENST00000380071 ANKRD36BQ8N2N9 1353 aa15.71■□□□□ 0.11
RFC3-201ENST00000380071 ARHGEF28Q8N1W1 1705 aaKnown RBP15.71■□□□□ 0.11
RFC3-201ENST00000380071 CLUAP1Q96AJ1 413 aa15.71■□□□□ 0.11
RFC3-201ENST00000380071 PUS7Q96PZ0 661 aaKnown RBP15.71■□□□□ 0.11
RFC3-201ENST00000380071 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
RFC3-201ENST00000380071 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
RFC3-201ENST00000380071 USP32Q8NFA0 1604 aa15.7■□□□□ 0.1
RFC3-201ENST00000380071 U2AF1L5P0DN76 240 aaPredicted RBP15.7■□□□□ 0.1
RFC3-201ENST00000380071 U2AF1Q01081 240 aaKnown RBP eCLIP15.7■□□□□ 0.1
RFC3-201ENST00000380071 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
RFC3-201ENST00000380071 DIP2CQ9Y2E4 1556 aa15.7■□□□□ 0.1
RFC3-201ENST00000380071 NEO1Q92859 1461 aa15.69■□□□□ 0.1
RFC3-201ENST00000380071 RLBP1P12271 317 aa15.68■□□□□ 0.1
RFC3-201ENST00000380071 SRPK2P78362 688 aaKnown RBP15.68■□□□□ 0.1
RFC3-201ENST00000380071 YEATS2Q9ULM3 1422 aa15.67■□□□□ 0.1
RFC3-201ENST00000380071 PPM1GO15355 546 aaPredicted RBP15.67■□□□□ 0.1
RFC3-201ENST00000380071 CCDC27Q2M243 656 aa15.67■□□□□ 0.1
RFC3-201ENST00000380071 GGNBP2Q9H3C7 697 aa15.67■□□□□ 0.1
RFC3-201ENST00000380071 ARHGAP31Q2M1Z3 1444 aa15.67■□□□□ 0.1
RFC3-201ENST00000380071 A0A1W2PP64 1363 aa15.66■□□□□ 0.1
RFC3-201ENST00000380071 NINLQ9Y2I6 1382 aa15.66■□□□□ 0.1
RFC3-201ENST00000380071 SLC52A1Q9NWF4 448 aa15.66■□□□□ 0.1
RFC3-201ENST00000380071 NSD2O96028 1365 aa15.65■□□□□ 0.1
RFC3-201ENST00000380071 MINK1Q8N4C8 1332 aaPredicted RBP15.65■□□□□ 0.1
RFC3-201ENST00000380071 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
RFC3-201ENST00000380071 MYO5BQ9ULV0 1848 aa15.64■□□□□ 0.09
RFC3-201ENST00000380071 FBXO31Q5XUX0 539 aaPredicted RBP15.64■□□□□ 0.09
RFC3-201ENST00000380071 USP35Q9P2H5 1018 aa15.64■□□□□ 0.09
RFC3-201ENST00000380071 PRAM1Q96QH2 718 aa15.64■□□□□ 0.09
RFC3-201ENST00000380071 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
RFC3-201ENST00000380071 U2SURPO15042 1029 aaKnown RBP15.63■□□□□ 0.09
RFC3-201ENST00000380071 RICTORQ6R327 1708 aa15.63■□□□□ 0.09
RFC3-201ENST00000380071 FYB1O15117 783 aa15.63■□□□□ 0.09
RFC3-201ENST00000380071 TSR2Q969E8 191 aaKnown RBP15.63■□□□□ 0.09
RFC3-201ENST00000380071 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
RFC3-201ENST00000380071 DAXXQ9UER7 740 aaPredicted RBP15.63■□□□□ 0.09
RFC3-201ENST00000380071 ABCC11Q96J66 1382 aa15.63■□□□□ 0.09
RFC3-201ENST00000380071 SEC24BO95487 1268 aa15.62■□□□□ 0.09
RFC3-201ENST00000380071 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
RFC3-201ENST00000380071 POGKQ9P215 609 aa15.62■□□□□ 0.09
RFC3-201ENST00000380071 USP19O94966 1318 aa15.61■□□□□ 0.09
RFC3-201ENST00000380071 PTPRMP28827 1452 aa15.61■□□□□ 0.09
RFC3-201ENST00000380071 PMFBP1Q8TBY8 1022 aa15.6■□□□□ 0.09
RFC3-201ENST00000380071 TMEM131LA2VDJ0 1609 aa15.6■□□□□ 0.09
RFC3-201ENST00000380071 TMPOP42166 694 aaKnown RBP15.59■□□□□ 0.09
RFC3-201ENST00000380071 NFKBIBQ15653 356 aa15.59■□□□□ 0.09
RFC3-201ENST00000380071 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
RFC3-201ENST00000380071 TRIM35Q9UPQ4 493 aa15.59■□□□□ 0.09
RFC3-201ENST00000380071 MAPK8IP3Q9UPT6 1336 aa15.59■□□□□ 0.09
RFC3-201ENST00000380071 YTHDC2Q9H6S0 1430 aaKnown RBP15.59■□□□□ 0.09
RFC3-201ENST00000380071 PREX1Q8TCU6 1659 aa15.58■□□□□ 0.09
RFC3-201ENST00000380071 CD163L1Q9NR16 1453 aa15.58■□□□□ 0.09
RFC3-201ENST00000380071 TERF2IPQ9NYB0 399 aa15.58■□□□□ 0.09
RFC3-201ENST00000380071 ADGRB2O60241 1585 aa15.58■□□□□ 0.09
RFC3-201ENST00000380071 EXOSC9Q06265 439 aaKnown RBP15.58■□□□□ 0.08
RFC3-201ENST00000380071 CDK19Q9BWU1 502 aa15.58■□□□□ 0.08
RFC3-201ENST00000380071 PDZRN3Q9UPQ7 1066 aa15.57■□□□□ 0.08
RFC3-201ENST00000380071 ATAD2Q6PL18 1390 aa15.57■□□□□ 0.08
RFC3-201ENST00000380071 CABP1Q9NZU7 370 aa15.57■□□□□ 0.08
RFC3-201ENST00000380071 COL3A1P02461 1466 aaPredicted RBP15.57■□□□□ 0.08
RFC3-201ENST00000380071 AAMPQ13685 434 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 145.9 ms