RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 ANKRD36BQ8N2N9 1353 aa33.23■■■□□ 2.91
NDEL1-202ENST00000380025 CABP2Q9NPB3 220 aa33.23■■■□□ 2.91
NDEL1-202ENST00000380025 SETD1AO15047 1707 aaKnown RBP33.23■■■□□ 2.91
NDEL1-202ENST00000380025 PRAM1Q96QH2 718 aa33.2■■■□□ 2.91
NDEL1-202ENST00000380025 RCAN3Q9UKA8 241 aa33.2■■■□□ 2.9
NDEL1-202ENST00000380025 ESF1Q9H501 851 aaKnown RBP33.19■■■□□ 2.9
NDEL1-202ENST00000380025 PLEKHH1Q9ULM0 1364 aa33.19■■■□□ 2.9
NDEL1-202ENST00000380025 POLR3AO14802 1390 aaPredicted RBP33.18■■■□□ 2.9
NDEL1-202ENST00000380025 B4GALNT3Q6L9W6 998 aa33.18■■■□□ 2.9
NDEL1-202ENST00000380025 MORC1Q86VD1 984 aa33.18■■■□□ 2.9
NDEL1-202ENST00000380025 CGNL1Q0VF96 1302 aa33.17■■■□□ 2.9
NDEL1-202ENST00000380025 NINLQ9Y2I6 1382 aa33.16■■■□□ 2.9
NDEL1-202ENST00000380025 POGKQ9P215 609 aa33.15■■■□□ 2.9
NDEL1-202ENST00000380025 MINK1Q8N4C8 1332 aaPredicted RBP33.15■■■□□ 2.9
NDEL1-202ENST00000380025 RRP1P56182 461 aaKnown RBP33.14■■■□□ 2.9
NDEL1-202ENST00000380025 NRXN3Q9Y4C0 1643 aa33.14■■■□□ 2.9
NDEL1-202ENST00000380025 DLC1Q96QB1 1528 aa33.14■■■□□ 2.9
NDEL1-202ENST00000380025 SRPK2P78362 688 aaKnown RBP33.13■■■□□ 2.89
NDEL1-202ENST00000380025 ZNF521Q96K83 1311 aa33.13■■■□□ 2.89
NDEL1-202ENST00000380025 SHPRHQ149N8 1683 aa33.13■■■□□ 2.89
NDEL1-202ENST00000380025 NSD2O96028 1365 aa33.11■■■□□ 2.89
NDEL1-202ENST00000380025 ATAD2Q6PL18 1390 aa33.11■■■□□ 2.89
NDEL1-202ENST00000380025 A0A1W2PP64 1363 aa33.1■■■□□ 2.89
NDEL1-202ENST00000380025 CCDC146Q8IYE0 955 aa33.09■■■□□ 2.89
NDEL1-202ENST00000380025 TNRQ92752 1358 aa33.08■■■□□ 2.89
NDEL1-202ENST00000380025 TNNT2P45379 298 aaPredicted RBP33.07■■■□□ 2.89
NDEL1-202ENST00000380025 ABCC11Q96J66 1382 aa33.06■■■□□ 2.88
NDEL1-202ENST00000380025 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.06■■■□□ 2.88
NDEL1-202ENST00000380025 CD163L1Q9NR16 1453 aa33.05■■■□□ 2.88
NDEL1-202ENST00000380025 UBR1Q8IWV7 1749 aa33.03■■■□□ 2.88
NDEL1-202ENST00000380025 APAF1O14727 1248 aa33.02■■■□□ 2.88
NDEL1-202ENST00000380025 CDK19Q9BWU1 502 aa33.01■■■□□ 2.87
NDEL1-202ENST00000380025 GOLGA2Q08379 1002 aa33■■■□□ 2.87
NDEL1-202ENST00000380025 DUSP27Q5VZP5 1158 aa33■■■□□ 2.87
NDEL1-202ENST00000380025 ANKRD26Q9UPS8 1709 aa32.98■■■□□ 2.87
NDEL1-202ENST00000380025 MTHFSP49914 203 aa32.98■■■□□ 2.87
NDEL1-202ENST00000380025 WAPLQ7Z5K2 1190 aa32.98■■■□□ 2.87
NDEL1-202ENST00000380025 TERF2IPQ9NYB0 399 aa32.97■■■□□ 2.87
NDEL1-202ENST00000380025 METP08581 1390 aa32.97■■■□□ 2.87
NDEL1-202ENST00000380025 CCDC136Q96JN2 1154 aa32.96■■■□□ 2.87
NDEL1-202ENST00000380025 KNDC1Q76NI1 1749 aa32.95■■■□□ 2.87
NDEL1-202ENST00000380025 NLRP1Q9C000 1473 aa32.94■■■□□ 2.86
NDEL1-202ENST00000380025 TMEM2Q9UHN6 1383 aa32.94■■■□□ 2.86
NDEL1-202ENST00000380025 SLFN5Q08AF3 891 aa32.94■■■□□ 2.86
NDEL1-202ENST00000380025 RBM19Q9Y4C8 960 aaKnown RBP32.93■■■□□ 2.86
NDEL1-202ENST00000380025 HDGFP51858 240 aaKnown RBP32.93■■■□□ 2.86
NDEL1-202ENST00000380025 NGEFQ8N5V2 710 aa32.93■■■□□ 2.86
NDEL1-202ENST00000380025 MED14O60244 1454 aa32.93■■■□□ 2.86
NDEL1-202ENST00000380025 TRMT2AQ8IZ69 625 aaKnown RBP32.92■■■□□ 2.86
NDEL1-202ENST00000380025 EXOC6Q8TAG9 804 aa32.92■■■□□ 2.86
NDEL1-202ENST00000380025 CFAP53Q96M91 514 aa32.91■■■□□ 2.86
NDEL1-202ENST00000380025 CABP1Q9NZU7 370 aa32.89■■■□□ 2.86
NDEL1-202ENST00000380025 HDGFL2Q7Z4V5 671 aaPredicted RBP32.89■■■□□ 2.86
NDEL1-202ENST00000380025 GGNBP2Q9H3C7 697 aa32.89■■■□□ 2.86
NDEL1-202ENST00000380025 KIF20BQ96Q89 1820 aa32.88■■■□□ 2.85
NDEL1-202ENST00000380025 TECPR2O15040 1411 aa32.88■■■□□ 2.85
NDEL1-202ENST00000380025 FYB1O15117 783 aa32.88■■■□□ 2.85
NDEL1-202ENST00000380025 IQSEC2Q5JU85 1478 aa32.88■■■□□ 2.85
NDEL1-202ENST00000380025 SPINK5Q9NQ38 1064 aaPredicted RBP32.87■■■□□ 2.85
NDEL1-202ENST00000380025 CPS1P31327 1500 aa32.87■■■□□ 2.85
NDEL1-202ENST00000380025 PLIN1O60240 522 aa32.86■■■□□ 2.85
NDEL1-202ENST00000380025 ATP7BP35670 1465 aa32.86■■■□□ 2.85
NDEL1-202ENST00000380025 FAM135BQ49AJ0 1406 aa32.85■■■□□ 2.85
NDEL1-202ENST00000380025 C3P01024 1663 aa32.85■■■□□ 2.85
NDEL1-202ENST00000380025 RUNDC1Q96C34 613 aa32.85■■■□□ 2.85
NDEL1-202ENST00000380025 TXNDC2Q86VQ3 553 aa32.83■■■□□ 2.85
NDEL1-202ENST00000380025 CEBPAP49715 358 aaPredicted RBP32.82■■■□□ 2.84
NDEL1-202ENST00000380025 SIRT1Q96EB6 747 aa32.82■■■□□ 2.84
NDEL1-202ENST00000380025 DMRT2Q9Y5R5 561 aa32.82■■■□□ 2.84
NDEL1-202ENST00000380025 ADAMTS13Q76LX8 1427 aa32.81■■■□□ 2.84
NDEL1-202ENST00000380025 NKTRP30414 1462 aaKnown RBP32.81■■■□□ 2.84
NDEL1-202ENST00000380025 E9PSI1 815 aa32.81■■■□□ 2.84
NDEL1-202ENST00000380025 COL3A1P02461 1466 aaPredicted RBP32.8■■■□□ 2.84
NDEL1-202ENST00000380025 WASLO00401 505 aaPredicted RBP32.8■■■□□ 2.84
NDEL1-202ENST00000380025 FER1L4A9Z1Z3 1794 aa32.8■■■□□ 2.84
NDEL1-202ENST00000380025 WWC1Q8IX03 1113 aa32.79■■■□□ 2.84
NDEL1-202ENST00000380025 PLEKHG1Q9ULL1 1385 aa32.77■■■□□ 2.84
NDEL1-202ENST00000380025 TCP11L2Q8N4U5 519 aa32.76■■■□□ 2.84
NDEL1-202ENST00000380025 LTKP29376 864 aa32.75■■■□□ 2.83
NDEL1-202ENST00000380025 PHF23Q9BUL5 403 aaPredicted RBP32.75■■■□□ 2.83
NDEL1-202ENST00000380025 CPSF1Q10570 1443 aaKnown RBP32.74■■■□□ 2.83
NDEL1-202ENST00000380025 PPIP5K1Q6PFW1 1433 aa32.74■■■□□ 2.83
NDEL1-202ENST00000380025 ADGRB2O60241 1585 aa32.73■■■□□ 2.83
NDEL1-202ENST00000380025 CRBNQ96SW2 442 aa32.73■■■□□ 2.83
NDEL1-202ENST00000380025 U2AF1L5P0DN76 240 aaPredicted RBP32.72■■■□□ 2.83
NDEL1-202ENST00000380025 U2AF1Q01081 240 aaKnown RBP eCLIP32.72■■■□□ 2.831e-9■□□□□ 8.6
NDEL1-202ENST00000380025 RRP7AQ9Y3A4 280 aaKnown RBP32.72■■■□□ 2.83
NDEL1-202ENST00000380025 ROBO2Q9HCK4 1378 aa32.71■■■□□ 2.83
NDEL1-202ENST00000380025 C20orf194Q5TEA3 1177 aa32.71■■■□□ 2.83
NDEL1-202ENST00000380025 NEUROD2Q15784 382 aa32.7■■■□□ 2.83
NDEL1-202ENST00000380025 SLIT1O75093 1534 aa32.7■■■□□ 2.82
NDEL1-202ENST00000380025 CDC42BPGQ6DT37 1551 aa32.69■■■□□ 2.82
NDEL1-202ENST00000380025 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.69■■■□□ 2.823e-9■■■■□ 20
NDEL1-202ENST00000380025 ARHGAP23Q9P227 1491 aa32.68■■■□□ 2.82
NDEL1-202ENST00000380025 EDC4Q6P2E9 1401 aaKnown RBP32.68■■■□□ 2.82
NDEL1-202ENST00000380025 CCDC27Q2M243 656 aa32.68■■■□□ 2.82
NDEL1-202ENST00000380025 NUDT16Q96DE0 195 aaKnown RBP32.68■■■□□ 2.82
NDEL1-202ENST00000380025 TRHP20396 242 aaPredicted RBP32.67■■■□□ 2.82
NDEL1-202ENST00000380025 PNPLA6Q8IY17 1366 aa32.67■■■□□ 2.82
NDEL1-202ENST00000380025 MON2Q7Z3U7 1717 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms