RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 STRCQ7RTU9 1775 aa16.68■□□□□ 0.26
EXOSC9-202ENST00000379663 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
EXOSC9-202ENST00000379663 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
EXOSC9-202ENST00000379663 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
EXOSC9-202ENST00000379663 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
EXOSC9-202ENST00000379663 TBX22Q9Y458 520 aa16.67■□□□□ 0.26
EXOSC9-202ENST00000379663 NWD1Q149M9 1564 aa16.67■□□□□ 0.26
EXOSC9-202ENST00000379663 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
EXOSC9-202ENST00000379663 NPHP4O75161 1426 aaPredicted RBP16.66■□□□□ 0.26
EXOSC9-202ENST00000379663 SIRT1Q96EB6 747 aa16.65■□□□□ 0.26
EXOSC9-202ENST00000379663 STK26Q9P289 416 aa16.65■□□□□ 0.26
EXOSC9-202ENST00000379663 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
EXOSC9-202ENST00000379663 SLC26A8Q96RN1 970 aa16.63■□□□□ 0.25
EXOSC9-202ENST00000379663 ROBO2Q9HCK4 1378 aa16.62■□□□□ 0.25
EXOSC9-202ENST00000379663 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
EXOSC9-202ENST00000379663 BCANQ96GW7 911 aa16.62■□□□□ 0.25
EXOSC9-202ENST00000379663 PRAM1Q96QH2 718 aa16.62■□□□□ 0.25
EXOSC9-202ENST00000379663 STRCP1A6NGW2 1772 aa16.61■□□□□ 0.25
EXOSC9-202ENST00000379663 NALCNQ8IZF0 1738 aa16.6■□□□□ 0.25
EXOSC9-202ENST00000379663 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
EXOSC9-202ENST00000379663 TOPAZ1Q8N9V7 1692 aa16.6■□□□□ 0.25
EXOSC9-202ENST00000379663 USP32Q8NFA0 1604 aa16.58■□□□□ 0.25
EXOSC9-202ENST00000379663 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
EXOSC9-202ENST00000379663 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
EXOSC9-202ENST00000379663 MIER1Q8N108 512 aa16.58■□□□□ 0.24
EXOSC9-202ENST00000379663 POLR3GLQ9BT43 218 aa16.57■□□□□ 0.24
EXOSC9-202ENST00000379663 POGKQ9P215 609 aa16.57■□□□□ 0.24
EXOSC9-202ENST00000379663 NCKAP5LQ9HCH0 1330 aa16.57■□□□□ 0.24
EXOSC9-202ENST00000379663 WAPLQ7Z5K2 1190 aa16.56■□□□□ 0.24
EXOSC9-202ENST00000379663 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
EXOSC9-202ENST00000379663 AKAP12Q02952 1782 aa16.56■□□□□ 0.24
EXOSC9-202ENST00000379663 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
EXOSC9-202ENST00000379663 SAFB2Q14151 953 aaKnown RBP eCLIP16.55■□□□□ 0.24
EXOSC9-202ENST00000379663 AMOTL2Q9Y2J4 779 aa16.55■□□□□ 0.24
EXOSC9-202ENST00000379663 MINK1Q8N4C8 1332 aaPredicted RBP16.55■□□□□ 0.24
EXOSC9-202ENST00000379663 NINLQ9Y2I6 1382 aa16.54■□□□□ 0.24
EXOSC9-202ENST00000379663 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
EXOSC9-202ENST00000379663 CDC42BPGQ6DT37 1551 aa16.53■□□□□ 0.24
EXOSC9-202ENST00000379663 MON2Q7Z3U7 1717 aa16.53■□□□□ 0.24
EXOSC9-202ENST00000379663 PER1O15534 1290 aaPredicted RBP16.53■□□□□ 0.24
EXOSC9-202ENST00000379663 ATAD2Q6PL18 1390 aa16.53■□□□□ 0.24
EXOSC9-202ENST00000379663 ATP7BP35670 1465 aa16.52■□□□□ 0.24
EXOSC9-202ENST00000379663 HSPA2P54652 639 aa16.52■□□□□ 0.24
EXOSC9-202ENST00000379663 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.23
EXOSC9-202ENST00000379663 ANKRD26Q9UPS8 1709 aa16.52■□□□□ 0.23
EXOSC9-202ENST00000379663 ANP32CO43423 234 aa16.5■□□□□ 0.23
EXOSC9-202ENST00000379663 KCNA6P17658 529 aa16.5■□□□□ 0.23
EXOSC9-202ENST00000379663 KIF20BQ96Q89 1820 aa16.5■□□□□ 0.23
EXOSC9-202ENST00000379663 CD163L1Q9NR16 1453 aa16.5■□□□□ 0.23
EXOSC9-202ENST00000379663 NPM3O75607 178 aaKnown RBP16.5■□□□□ 0.23
EXOSC9-202ENST00000379663 PANK3Q9H999 370 aa16.5■□□□□ 0.23
EXOSC9-202ENST00000379663 WASLO00401 505 aaPredicted RBP16.49■□□□□ 0.23
EXOSC9-202ENST00000379663 CABP2Q9NPB3 220 aa16.49■□□□□ 0.23
EXOSC9-202ENST00000379663 ANKRD36BQ8N2N9 1353 aa16.48■□□□□ 0.23
EXOSC9-202ENST00000379663 CDK19Q9BWU1 502 aa16.48■□□□□ 0.23
EXOSC9-202ENST00000379663 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
EXOSC9-202ENST00000379663 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
EXOSC9-202ENST00000379663 NRKQ7Z2Y5 1582 aa16.47■□□□□ 0.23
EXOSC9-202ENST00000379663 NPC1L1Q9UHC9 1359 aa16.47■□□□□ 0.23
EXOSC9-202ENST00000379663 ADGRL3Q9HAR2 1447 aa16.46■□□□□ 0.23
EXOSC9-202ENST00000379663 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.23
EXOSC9-202ENST00000379663 PARD3Q8TEW0 1356 aa16.45■□□□□ 0.22
EXOSC9-202ENST00000379663 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
EXOSC9-202ENST00000379663 CCER2I3L3R5 266 aa16.44■□□□□ 0.22
EXOSC9-202ENST00000379663 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
EXOSC9-202ENST00000379663 A0A1W2PP64 1363 aa16.44■□□□□ 0.22
EXOSC9-202ENST00000379663 ANKARQ7Z5J8 1434 aa16.43■□□□□ 0.22
EXOSC9-202ENST00000379663 CPSF1Q10570 1443 aaKnown RBP16.43■□□□□ 0.22
EXOSC9-202ENST00000379663 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
EXOSC9-202ENST00000379663 AMER1Q5JTC6 1135 aaPredicted RBP16.42■□□□□ 0.22
EXOSC9-202ENST00000379663 CARD14Q9BXL6 1004 aa16.42■□□□□ 0.22
EXOSC9-202ENST00000379663 PRR36Q9H6K5 1346 aa16.42■□□□□ 0.22
EXOSC9-202ENST00000379663 NSD3Q9BZ95 1437 aa16.42■□□□□ 0.22
EXOSC9-202ENST00000379663 TMC1Q8TDI8 760 aa16.41■□□□□ 0.22
EXOSC9-202ENST00000379663 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
EXOSC9-202ENST00000379663 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
EXOSC9-202ENST00000379663 KNSTRNQ9Y448 316 aa16.4■□□□□ 0.22
EXOSC9-202ENST00000379663 RALBP1Q15311 655 aa16.39■□□□□ 0.21
EXOSC9-202ENST00000379663 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
EXOSC9-202ENST00000379663 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
EXOSC9-202ENST00000379663 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
EXOSC9-202ENST00000379663 DCCP43146 1447 aa16.37■□□□□ 0.21
EXOSC9-202ENST00000379663 NSD2O96028 1365 aa16.37■□□□□ 0.21
EXOSC9-202ENST00000379663 KIF1AQ12756 1690 aa16.36■□□□□ 0.21
EXOSC9-202ENST00000379663 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
EXOSC9-202ENST00000379663 EDC4Q6P2E9 1401 aaKnown RBP16.35■□□□□ 0.21
EXOSC9-202ENST00000379663 LRRC7Q96NW7 1537 aa16.35■□□□□ 0.21
EXOSC9-202ENST00000379663 MYBBP1AQ9BQG0 1328 aaKnown RBP16.35■□□□□ 0.21
EXOSC9-202ENST00000379663 POLR3AO14802 1390 aaPredicted RBP16.34■□□□□ 0.21
EXOSC9-202ENST00000379663 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
EXOSC9-202ENST00000379663 PLEKHG3A1L390 1219 aa16.34■□□□□ 0.21
EXOSC9-202ENST00000379663 CC2D1BQ5T0F9 858 aaKnown RBP16.34■□□□□ 0.21
EXOSC9-202ENST00000379663 TMEM94Q12767 1356 aa16.33■□□□□ 0.21
EXOSC9-202ENST00000379663 CGNL1Q0VF96 1302 aa16.33■□□□□ 0.2
EXOSC9-202ENST00000379663 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
EXOSC9-202ENST00000379663 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
EXOSC9-202ENST00000379663 USP6P35125 1406 aa16.32■□□□□ 0.2
EXOSC9-202ENST00000379663 SSH2Q76I76 1423 aa16.32■□□□□ 0.2
EXOSC9-202ENST00000379663 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
EXOSC9-202ENST00000379663 RBM33Q96EV2 1170 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms