RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 NPHP1O15259 732 aa17.83■□□□□ 0.44
SHROOM1-203ENST00000378679 HMMRO75330 724 aa17.83■□□□□ 0.44
SHROOM1-203ENST00000378679 SLC4A3P48751 1232 aa17.83■□□□□ 0.44
SHROOM1-203ENST00000378679 SULT6B1Q6IMI4 303 aa17.82■□□□□ 0.44
SHROOM1-203ENST00000378679 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
SHROOM1-203ENST00000378679 TESK2Q96S53 571 aa17.82■□□□□ 0.44
SHROOM1-203ENST00000378679 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
SHROOM1-203ENST00000378679 ABCA8O94911 1581 aa17.82■□□□□ 0.44
SHROOM1-203ENST00000378679 EVA1CP58658 441 aa17.81■□□□□ 0.44
SHROOM1-203ENST00000378679 ANP32BQ92688 251 aaKnown RBP17.81■□□□□ 0.44
SHROOM1-203ENST00000378679 KCNJ4P48050 445 aa17.81■□□□□ 0.44
SHROOM1-203ENST00000378679 TEX14Q8IWB6 1497 aa17.81■□□□□ 0.44
SHROOM1-203ENST00000378679 TSPYL4Q9UJ04 414 aa17.81■□□□□ 0.44
SHROOM1-203ENST00000378679 TSR2Q969E8 191 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-203ENST00000378679 IPO9Q96P70 1041 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-203ENST00000378679 NLRP2Q9NX02 1062 aa17.8■□□□□ 0.44
SHROOM1-203ENST00000378679 EXOSC9Q06265 439 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-203ENST00000378679 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
SHROOM1-203ENST00000378679 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
SHROOM1-203ENST00000378679 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
SHROOM1-203ENST00000378679 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
SHROOM1-203ENST00000378679 HSP90AB1P08238 724 aaKnown RBP17.78■□□□□ 0.44
SHROOM1-203ENST00000378679 RAPGEF4Q8WZA2 1011 aa17.78■□□□□ 0.44
SHROOM1-203ENST00000378679 API5Q9BZZ5 524 aaKnown RBP17.78■□□□□ 0.44
SHROOM1-203ENST00000378679 BCAR3O75815 825 aa17.77■□□□□ 0.44
SHROOM1-203ENST00000378679 NME9Q86XW9 330 aa17.77■□□□□ 0.44
SHROOM1-203ENST00000378679 FANCIQ9NVI1 1328 aa17.77■□□□□ 0.44
SHROOM1-203ENST00000378679 KIF16BQ96L93 1317 aa17.77■□□□□ 0.43
SHROOM1-203ENST00000378679 PDE4AP27815 886 aa17.77■□□□□ 0.43
SHROOM1-203ENST00000378679 SPRYD3Q8NCJ5 442 aa17.76■□□□□ 0.43
SHROOM1-203ENST00000378679 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
SHROOM1-203ENST00000378679 TNRQ92752 1358 aa17.76■□□□□ 0.43
SHROOM1-203ENST00000378679 GLIPR1L2Q4G1C9 344 aa17.76■□□□□ 0.43
SHROOM1-203ENST00000378679 ANKRD45Q5TZF3 282 aa17.76■□□□□ 0.43
SHROOM1-203ENST00000378679 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.76■□□□□ 0.433e-8■■■□□ 17.7
SHROOM1-203ENST00000378679 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
SHROOM1-203ENST00000378679 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
SHROOM1-203ENST00000378679 XPCQ01831 940 aaPredicted RBP17.75■□□□□ 0.43
SHROOM1-203ENST00000378679 HDAC5Q9UQL6 1122 aa17.75■□□□□ 0.43
SHROOM1-203ENST00000378679 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
SHROOM1-203ENST00000378679 HSCBQ8IWL3 235 aa17.75■□□□□ 0.43
SHROOM1-203ENST00000378679 FKBP5Q13451 457 aaPredicted RBP17.75■□□□□ 0.43
SHROOM1-203ENST00000378679 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
SHROOM1-203ENST00000378679 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
SHROOM1-203ENST00000378679 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
SHROOM1-203ENST00000378679 WDR63Q8IWG1 891 aa17.73■□□□□ 0.43
SHROOM1-203ENST00000378679 FCHSD2O94868 740 aa17.73■□□□□ 0.43
SHROOM1-203ENST00000378679 SMG6Q86US8 1419 aaKnown RBP17.73■□□□□ 0.43
SHROOM1-203ENST00000378679 CFAP44Q96MT7 982 aa17.72■□□□□ 0.43
SHROOM1-203ENST00000378679 ATP7AQ04656 1500 aa17.72■□□□□ 0.43
SHROOM1-203ENST00000378679 TTC5Q8N0Z6 440 aa17.72■□□□□ 0.43
SHROOM1-203ENST00000378679 GAS2L2Q8NHY3 880 aa17.72■□□□□ 0.43
SHROOM1-203ENST00000378679 UHRF1BP1LA0JNW5 1464 aa17.72■□□□□ 0.43
SHROOM1-203ENST00000378679 TMPOP42166 694 aaKnown RBP17.71■□□□□ 0.43
SHROOM1-203ENST00000378679 FGD1P98174 961 aa17.71■□□□□ 0.43
SHROOM1-203ENST00000378679 EMILIN1Q9Y6C2 1016 aa17.71■□□□□ 0.43
SHROOM1-203ENST00000378679 TRIM6-TRIM34B2RNG4 842 aa17.7■□□□□ 0.42
SHROOM1-203ENST00000378679 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
SHROOM1-203ENST00000378679 SLFN5Q08AF3 891 aa17.7■□□□□ 0.42
SHROOM1-203ENST00000378679 FAM161AQ3B820 660 aa17.7■□□□□ 0.42
SHROOM1-203ENST00000378679 ARHGEF12Q9NZN5 1544 aa17.69■□□□□ 0.42
SHROOM1-203ENST00000378679 TWISTNBQ3B726 338 aaPredicted RBP17.69■□□□□ 0.42
SHROOM1-203ENST00000378679 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
SHROOM1-203ENST00000378679 MCCP23508 829 aa17.69■□□□□ 0.42
SHROOM1-203ENST00000378679 SLKQ9H2G2 1235 aaPredicted RBP17.69■□□□□ 0.42
SHROOM1-203ENST00000378679 FBLN1P23142 703 aa17.68■□□□□ 0.42
SHROOM1-203ENST00000378679 KIAA1211Q6ZU35 1233 aa17.68■□□□□ 0.42
SHROOM1-203ENST00000378679 FOXO3O43524 673 aa17.68■□□□□ 0.42
SHROOM1-203ENST00000378679 PDE3AQ14432 1141 aa17.67■□□□□ 0.42
SHROOM1-203ENST00000378679 TPRNQ4KMQ1 711 aa17.67■□□□□ 0.42
SHROOM1-203ENST00000378679 THUMPD2Q9BTF0 503 aaKnown RBP17.67■□□□□ 0.42
SHROOM1-203ENST00000378679 USP35Q9P2H5 1018 aa17.67■□□□□ 0.42
SHROOM1-203ENST00000378679 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
SHROOM1-203ENST00000378679 PER1O15534 1290 aaPredicted RBP17.66■□□□□ 0.42
SHROOM1-203ENST00000378679 C9orf78Q9NZ63 289 aaPredicted RBP17.66■□□□□ 0.42
SHROOM1-203ENST00000378679 CHD1O14646 1710 aa17.66■□□□□ 0.42
SHROOM1-203ENST00000378679 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
SHROOM1-203ENST00000378679 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 FYB1O15117 783 aa17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 ZC3H6P61129 1189 aaKnown RBP17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 NFE2L2Q16236 605 aa17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 PLEKHO1Q53GL0 409 aaPredicted RBP17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 LNPKQ9C0E8 428 aa17.65■□□□□ 0.42
SHROOM1-203ENST00000378679 KDM6BO15054 1643 aa17.64■□□□□ 0.41
SHROOM1-203ENST00000378679 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
SHROOM1-203ENST00000378679 TAF7LQ5H9L4 462 aa17.64■□□□□ 0.41
SHROOM1-203ENST00000378679 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
SHROOM1-203ENST00000378679 CARD14Q9BXL6 1004 aa17.64■□□□□ 0.41
SHROOM1-203ENST00000378679 ARHGEF5Q12774 1597 aa17.63■□□□□ 0.41
SHROOM1-203ENST00000378679 NAP1L2Q9ULW6 460 aaPredicted RBP17.63■□□□□ 0.41
SHROOM1-203ENST00000378679 NOB1Q9ULX3 412 aaKnown RBP17.63■□□□□ 0.41
SHROOM1-203ENST00000378679 GORABQ5T7V8 394 aa17.62■□□□□ 0.41
SHROOM1-203ENST00000378679 TAOK2Q9UL54 1235 aa17.62■□□□□ 0.41
SHROOM1-203ENST00000378679 ACEP12821 1306 aa17.62■□□□□ 0.41
SHROOM1-203ENST00000378679 AAMPQ13685 434 aa17.62■□□□□ 0.41
SHROOM1-203ENST00000378679 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
SHROOM1-203ENST00000378679 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
SHROOM1-203ENST00000378679 SAMD9LQ8IVG5 1584 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms