RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 MYOM2P54296 1465 aa32.86■■■□□ 2.85
CCDC107-203ENST00000378407 KNDC1Q76NI1 1749 aa32.85■■■□□ 2.85
CCDC107-203ENST00000378407 WAPLQ7Z5K2 1190 aa32.84■■■□□ 2.85
CCDC107-203ENST00000378407 YTHDC2Q9H6S0 1430 aaKnown RBP32.84■■■□□ 2.85
CCDC107-203ENST00000378407 PNPLA6Q8IY17 1366 aa32.83■■■□□ 2.85
CCDC107-203ENST00000378407 ABCC11Q96J66 1382 aa32.83■■■□□ 2.85
CCDC107-203ENST00000378407 LAMC1P11047 1609 aa32.82■■■□□ 2.84
CCDC107-203ENST00000378407 ESCO1Q5FWF5 840 aa32.81■■■□□ 2.84
CCDC107-203ENST00000378407 PLEKHH1Q9ULM0 1364 aa32.78■■■□□ 2.84
CCDC107-203ENST00000378407 NRXN1Q9ULB1 1477 aa32.78■■■□□ 2.84
CCDC107-203ENST00000378407 NUTM2FA1L443 756 aa32.77■■■□□ 2.84
CCDC107-203ENST00000378407 CFAP70Q5T0N1 1121 aa32.77■■■□□ 2.84
CCDC107-203ENST00000378407 C14orf93Q9H972 538 aaKnown RBP32.77■■■□□ 2.84
CCDC107-203ENST00000378407 DHX57Q6P158 1386 aaKnown RBP32.77■■■□□ 2.84
CCDC107-203ENST00000378407 SOS2Q07890 1332 aaPredicted RBP32.76■■■□□ 2.83
CCDC107-203ENST00000378407 NPHP3Q7Z494 1330 aa32.76■■■□□ 2.83
CCDC107-203ENST00000378407 C8orf37Q96NL8 207 aa32.75■■■□□ 2.83
CCDC107-203ENST00000378407 AFF2P51816 1311 aa32.75■■■□□ 2.83
CCDC107-203ENST00000378407 ADAMTS2O95450 1211 aa32.71■■■□□ 2.83
CCDC107-203ENST00000378407 HRCP23327 699 aa32.71■■■□□ 2.83
CCDC107-203ENST00000378407 RXRBP28702 533 aa32.68■■■□□ 2.82
CCDC107-203ENST00000378407 KDM2AQ9Y2K7 1162 aa32.68■■■□□ 2.82
CCDC107-203ENST00000378407 FOXO3O43524 673 aa32.67■■■□□ 2.82
CCDC107-203ENST00000378407 SIRT1Q96EB6 747 aa32.67■■■□□ 2.82
CCDC107-203ENST00000378407 FMN2Q9NZ56 1722 aa32.67■■■□□ 2.82
CCDC107-203ENST00000378407 XPCQ01831 940 aaPredicted RBP32.66■■■□□ 2.82
CCDC107-203ENST00000378407 SAFB2Q14151 953 aaKnown RBP eCLIP32.66■■■□□ 2.82
CCDC107-203ENST00000378407 DCAF11Q8TEB1 546 aa32.66■■■□□ 2.82
CCDC107-203ENST00000378407 PRAM1Q96QH2 718 aa32.66■■■□□ 2.82
CCDC107-203ENST00000378407 POGKQ9P215 609 aa32.65■■■□□ 2.82
CCDC107-203ENST00000378407 PXDNQ92626 1479 aa32.64■■■□□ 2.82
CCDC107-203ENST00000378407 NGLY1Q96IV0 654 aa32.64■■■□□ 2.82
CCDC107-203ENST00000378407 KIF1AQ12756 1690 aa32.62■■■□□ 2.81
CCDC107-203ENST00000378407 COL22A1Q8NFW1 1626 aaPredicted RBP32.6■■■□□ 2.81
CCDC107-203ENST00000378407 DLC1Q96QB1 1528 aa32.59■■■□□ 2.81
CCDC107-203ENST00000378407 TRAK1Q9UPV9 953 aa32.57■■■□□ 2.8
CCDC107-203ENST00000378407 ADGRB1O14514 1584 aa32.57■■■□□ 2.8
CCDC107-203ENST00000378407 STAC3Q96MF2 364 aa32.56■■■□□ 2.8
CCDC107-203ENST00000378407 QTRT2Q9H974 415 aaKnown RBP32.56■■■□□ 2.8
CCDC107-203ENST00000378407 CDK12Q9NYV4 1490 aaPredicted RBP32.54■■■□□ 2.8
CCDC107-203ENST00000378407 PHF8Q9UPP1 1060 aa32.53■■■□□ 2.8
CCDC107-203ENST00000378407 RBM6P78332 1123 aaKnown RBP32.51■■■□□ 2.79
CCDC107-203ENST00000378407 USP21Q9UK80 565 aa32.51■■■□□ 2.79
CCDC107-203ENST00000378407 KRT28Q7Z3Y7 464 aa32.49■■■□□ 2.79
CCDC107-203ENST00000378407 ADGRB2O60241 1585 aa32.49■■■□□ 2.79
CCDC107-203ENST00000378407 HIRIP3Q9BW71 556 aaPredicted RBP32.48■■■□□ 2.79
CCDC107-203ENST00000378407 PSME1Q06323 249 aa32.47■■■□□ 2.79
CCDC107-203ENST00000378407 ANKARQ7Z5J8 1434 aa32.47■■■□□ 2.79
CCDC107-203ENST00000378407 SPATA31A3Q5VYP0 1347 aa32.47■■■□□ 2.79
CCDC107-203ENST00000378407 MINK1Q8N4C8 1332 aaPredicted RBP32.47■■■□□ 2.79
CCDC107-203ENST00000378407 EIF3AQ14152 1382 aaKnown RBP32.46■■■□□ 2.79
CCDC107-203ENST00000378407 RGPD8O14715 1765 aaPredicted RBP32.45■■■□□ 2.79
CCDC107-203ENST00000378407 RGS12O14924 1447 aa32.45■■■□□ 2.79
CCDC107-203ENST00000378407 HAP1P54257 671 aaPredicted RBP32.45■■■□□ 2.79
CCDC107-203ENST00000378407 TRPC5Q9UL62 973 aaPredicted RBP32.45■■■□□ 2.79
CCDC107-203ENST00000378407 TNS3Q68CZ2 1445 aa32.43■■■□□ 2.78
CCDC107-203ENST00000378407 LMOD2Q6P5Q4 547 aa32.42■■■□□ 2.78
CCDC107-203ENST00000378407 FNBP4Q8N3X1 1017 aaPredicted RBP32.42■■■□□ 2.78
CCDC107-203ENST00000378407 PMFBP1Q8TBY8 1022 aa32.41■■■□□ 2.78
CCDC107-203ENST00000378407 PLEKHG5O94827 1062 aa32.4■■■□□ 2.78
CCDC107-203ENST00000378407 UPF1Q92900 1129 aaKnown RBP eCLIP32.39■■■□□ 2.78
CCDC107-203ENST00000378407 USP32Q8NFA0 1604 aa32.39■■■□□ 2.78
CCDC107-203ENST00000378407 MARF1Q9Y4F3 1742 aaKnown RBP32.39■■■□□ 2.78
CCDC107-203ENST00000378407 TULP4Q9NRJ4 1543 aa32.37■■■□□ 2.77
CCDC107-203ENST00000378407 SBNO1A3KN83 1393 aa32.36■■■□□ 2.77
CCDC107-203ENST00000378407 ATRNO75882 1429 aa32.35■■■□□ 2.77
CCDC107-203ENST00000378407 ARHGEF10O15013 1369 aa32.35■■■□□ 2.77
CCDC107-203ENST00000378407 ARHGEF28Q8N1W1 1705 aaKnown RBP32.35■■■□□ 2.77
CCDC107-203ENST00000378407 WASLO00401 505 aaPredicted RBP32.34■■■□□ 2.77
CCDC107-203ENST00000378407 GPRASP1Q5JY77 1395 aa32.33■■■□□ 2.77
CCDC107-203ENST00000378407 BCL9LQ86UU0 1499 aa32.31■■■□□ 2.76
CCDC107-203ENST00000378407 CABLES1Q8TDN4 633 aa32.3■■■□□ 2.76
CCDC107-203ENST00000378407 PRR36Q9H6K5 1346 aa32.29■■■□□ 2.76
CCDC107-203ENST00000378407 KIAA1210Q9ULL0 1709 aa32.29■■■□□ 2.76
CCDC107-203ENST00000378407 NGDNQ8NEJ9 315 aaKnown RBP32.28■■■□□ 2.76
CCDC107-203ENST00000378407 ATAD2Q6PL18 1390 aa32.26■■■□□ 2.75
CCDC107-203ENST00000378407 UNC5CLQ8IV45 518 aa32.25■■■□□ 2.75
CCDC107-203ENST00000378407 SLIT2O94813 1529 aa32.24■■■□□ 2.75
CCDC107-203ENST00000378407 ITSN1Q15811 1721 aa32.23■■■□□ 2.75
CCDC107-203ENST00000378407 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.23■■■□□ 2.75
CCDC107-203ENST00000378407 GJD4Q96KN9 370 aaPredicted RBP32.23■■■□□ 2.75
CCDC107-203ENST00000378407 ABCA3Q99758 1704 aa32.23■■■□□ 2.75
CCDC107-203ENST00000378407 PAK3O75914 559 aaPredicted RBP32.22■■■□□ 2.75
CCDC107-203ENST00000378407 ATP7BP35670 1465 aa32.22■■■□□ 2.75
CCDC107-203ENST00000378407 TRPM3Q9HCF6 1732 aaPredicted RBP32.21■■■□□ 2.75
CCDC107-203ENST00000378407 NUDT16Q96DE0 195 aaKnown RBP32.2■■■□□ 2.75
CCDC107-203ENST00000378407 NBPF1Q3BBV0 1214 aa32.19■■■□□ 2.74
CCDC107-203ENST00000378407 CDK19Q9BWU1 502 aa32.18■■■□□ 2.74
CCDC107-203ENST00000378407 CCDC9Q9Y3X0 531 aaKnown RBP32.17■■■□□ 2.74
CCDC107-203ENST00000378407 PLCH1Q4KWH8 1693 aa32.17■■■□□ 2.74
CCDC107-203ENST00000378407 RALGAPBQ86X10 1494 aa32.16■■■□□ 2.74
CCDC107-203ENST00000378407 ALS2Q96Q42 1657 aa32.15■■■□□ 2.74
CCDC107-203ENST00000378407 NEUROD1Q13562 356 aa32.14■■■□□ 2.74
CCDC107-203ENST00000378407 L3MBTL2Q969R5 705 aa32.14■■■□□ 2.74
CCDC107-203ENST00000378407 NWD2Q9ULI1 1742 aa32.12■■■□□ 2.73
CCDC107-203ENST00000378407 CENPJQ9HC77 1338 aaPredicted RBP32.12■■■□□ 2.73
CCDC107-203ENST00000378407 SIN3AQ96ST3 1273 aa32.12■■■□□ 2.73
CCDC107-203ENST00000378407 GLI3P10071 1580 aa32.11■■■□□ 2.73
CCDC107-203ENST00000378407 SRPK2P78362 688 aaKnown RBP32.1■■■□□ 2.73
CCDC107-203ENST00000378407 VPS72Q15906 364 aa32.09■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms