RNA–Protein interactions for RNA: ENST00000378251.2

LRRC47-201, Transcript of leucine rich repeat containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC47, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47-201ENST00000378251 KCNJ4P48050 445 aa20.25■□□□□ 0.83
LRRC47-201ENST00000378251 ITSN2Q9NZM3 1697 aa20.25■□□□□ 0.83
LRRC47-201ENST00000378251 NME9Q86XW9 330 aa20.25■□□□□ 0.83
LRRC47-201ENST00000378251 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
LRRC47-201ENST00000378251 NSD3Q9BZ95 1437 aa20.24■□□□□ 0.83
LRRC47-201ENST00000378251 WASLO00401 505 aaPredicted RBP20.23■□□□□ 0.83
LRRC47-201ENST00000378251 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
LRRC47-201ENST00000378251 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
LRRC47-201ENST00000378251 RRP1P56182 461 aaKnown RBP20.22■□□□□ 0.83
LRRC47-201ENST00000378251 PRDM11Q9NQV5 511 aa20.22■□□□□ 0.83
LRRC47-201ENST00000378251 FBLN1P23142 703 aa20.22■□□□□ 0.83
LRRC47-201ENST00000378251 BECN1Q14457 450 aa20.21■□□□□ 0.83
LRRC47-201ENST00000378251 GTF2E1P29083 439 aaPredicted RBP20.21■□□□□ 0.83
LRRC47-201ENST00000378251 CFAP43Q8NDM7 1665 aa20.21■□□□□ 0.83
LRRC47-201ENST00000378251 MAPKBP1O60336 1514 aa20.2■□□□□ 0.82
LRRC47-201ENST00000378251 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
LRRC47-201ENST00000378251 TPRNQ4KMQ1 711 aa20.19■□□□□ 0.82
LRRC47-201ENST00000378251 ZMYM3Q14202 1370 aa20.19■□□□□ 0.82
LRRC47-201ENST00000378251 PHF8Q9UPP1 1060 aa20.19■□□□□ 0.82
LRRC47-201ENST00000378251 FKBP5Q13451 457 aaPredicted RBP20.18■□□□□ 0.82
LRRC47-201ENST00000378251 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
LRRC47-201ENST00000378251 GNAI1P63096 354 aa20.18■□□□□ 0.82
LRRC47-201ENST00000378251 ERCC6L2Q5T890 1561 aa20.18■□□□□ 0.82
LRRC47-201ENST00000378251 UHRF1BP1LA0JNW5 1464 aa20.18■□□□□ 0.82
LRRC47-201ENST00000378251 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
LRRC47-201ENST00000378251 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
LRRC47-201ENST00000378251 DISP3Q9P2K9 1392 aa20.16■□□□□ 0.82
LRRC47-201ENST00000378251 FGD1P98174 961 aa20.16■□□□□ 0.82
LRRC47-201ENST00000378251 ERICH6BQ5W0A0 696 aa20.16■□□□□ 0.82
LRRC47-201ENST00000378251 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
LRRC47-201ENST00000378251 DDRGK1Q96HY6 314 aa20.16■□□□□ 0.82
LRRC47-201ENST00000378251 EMILIN1Q9Y6C2 1016 aa20.16■□□□□ 0.82
LRRC47-201ENST00000378251 CFAP65Q6ZU64 1925 aaKnown RBP20.15■□□□□ 0.82
LRRC47-201ENST00000378251 AIMP1Q12904 312 aaKnown RBP20.15■□□□□ 0.82
LRRC47-201ENST00000378251 DDX54Q8TDD1 881 aaKnown RBP20.15■□□□□ 0.82
LRRC47-201ENST00000378251 HMMRO75330 724 aa20.14■□□□□ 0.81
LRRC47-201ENST00000378251 EXOSC9Q06265 439 aaKnown RBP20.13■□□□□ 0.81
LRRC47-201ENST00000378251 NAP1L2Q9ULW6 460 aaPredicted RBP20.13■□□□□ 0.81
LRRC47-201ENST00000378251 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
LRRC47-201ENST00000378251 SCAF11Q99590 1463 aaKnown RBP20.13■□□□□ 0.81
LRRC47-201ENST00000378251 GORABQ5T7V8 394 aa20.12■□□□□ 0.81
LRRC47-201ENST00000378251 CHD1O14646 1710 aa20.12■□□□□ 0.81
LRRC47-201ENST00000378251 MSH5O43196 834 aa20.12■□□□□ 0.81
LRRC47-201ENST00000378251 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
LRRC47-201ENST00000378251 THUMPD2Q9BTF0 503 aaKnown RBP20.12■□□□□ 0.81
LRRC47-201ENST00000378251 ZNF428Q96B54 188 aa20.11■□□□□ 0.81
LRRC47-201ENST00000378251 ZNF530Q6P9A1 599 aaPredicted RBP20.11■□□□□ 0.81
LRRC47-201ENST00000378251 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
LRRC47-201ENST00000378251 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
LRRC47-201ENST00000378251 C9orf78Q9NZ63 289 aaPredicted RBP20.11■□□□□ 0.81
LRRC47-201ENST00000378251 TRIM6-TRIM34B2RNG4 842 aa20.1■□□□□ 0.81
LRRC47-201ENST00000378251 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
LRRC47-201ENST00000378251 YEATS2Q9ULM3 1422 aa20.09■□□□□ 0.81
LRRC47-201ENST00000378251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.09■□□□□ 0.817e-7■■■■■ 35.8
LRRC47-201ENST00000378251 PZPP20742 1482 aa20.09■□□□□ 0.81
LRRC47-201ENST00000378251 USHBP1Q8N6Y0 703 aa20.09■□□□□ 0.81
LRRC47-201ENST00000378251 RIMS2Q9UQ26 1411 aa20.09■□□□□ 0.81
LRRC47-201ENST00000378251 ACEP12821 1306 aa20.08■□□□□ 0.81
LRRC47-201ENST00000378251 NEXNQ0ZGT2 675 aa20.08■□□□□ 0.81
LRRC47-201ENST00000378251 ANKRD45Q5TZF3 282 aa20.08■□□□□ 0.81
LRRC47-201ENST00000378251 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.81
LRRC47-201ENST00000378251 SHANK2Q9UPX8 1470 aa20.08■□□□□ 0.81
LRRC47-201ENST00000378251 ABCA8O94911 1581 aa20.08■□□□□ 0.8
LRRC47-201ENST00000378251 TATP17735 454 aaPredicted RBP20.08■□□□□ 0.8
LRRC47-201ENST00000378251 HDAC5Q9UQL6 1122 aa20.07■□□□□ 0.8
LRRC47-201ENST00000378251 KCNA6P17658 529 aa20.06■□□□□ 0.8
LRRC47-201ENST00000378251 ADAMTS2O95450 1211 aa20.06■□□□□ 0.8
LRRC47-201ENST00000378251 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
LRRC47-201ENST00000378251 ATP7AQ04656 1500 aa20.06■□□□□ 0.8
LRRC47-201ENST00000378251 DNMT1P26358 1616 aaKnown RBP20.06■□□□□ 0.8
LRRC47-201ENST00000378251 PRAG1Q86YV5 1406 aa20.05■□□□□ 0.8
LRRC47-201ENST00000378251 API5Q9BZZ5 524 aaKnown RBP20.05■□□□□ 0.8
LRRC47-201ENST00000378251 BCAR3O75815 825 aa20.05■□□□□ 0.8
LRRC47-201ENST00000378251 TESK2Q96S53 571 aa20.04■□□□□ 0.8
LRRC47-201ENST00000378251 ATP10AO60312 1499 aa20.04■□□□□ 0.8
LRRC47-201ENST00000378251 MFAP1P55081 439 aaKnown RBP20.03■□□□□ 0.8
LRRC47-201ENST00000378251 KRT28Q7Z3Y7 464 aa20.03■□□□□ 0.8
LRRC47-201ENST00000378251 MIS18AQ9NYP9 233 aa20.03■□□□□ 0.8
LRRC47-201ENST00000378251 MBD5Q9P267 1494 aa20.03■□□□□ 0.8
LRRC47-201ENST00000378251 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
LRRC47-201ENST00000378251 RBM42Q9BTD8 480 aaKnown RBP20.03■□□□□ 0.8
LRRC47-201ENST00000378251 HSP90AB1P08238 724 aaKnown RBP20.03■□□□□ 0.8
LRRC47-201ENST00000378251 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.03■□□□□ 0.8
LRRC47-201ENST00000378251 ZRANB1Q9UGI0 708 aa20.02■□□□□ 0.8
LRRC47-201ENST00000378251 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.8
LRRC47-201ENST00000378251 KIAA1211Q6ZU35 1233 aa20.02■□□□□ 0.8
LRRC47-201ENST00000378251 FCHSD2O94868 740 aa20.01■□□□□ 0.79
LRRC47-201ENST00000378251 TMPOP42166 694 aaKnown RBP20.01■□□□□ 0.79
LRRC47-201ENST00000378251 CADPS2Q86UW7 1296 aa20.01■□□□□ 0.79
LRRC47-201ENST00000378251 NCLP19338 710 aaKnown RBP20.01■□□□□ 0.79
LRRC47-201ENST00000378251 RIC3Q7Z5B4 369 aa20.01■□□□□ 0.79
LRRC47-201ENST00000378251 KCNH5Q8NCM2 988 aa20.01■□□□□ 0.79
LRRC47-201ENST00000378251 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
LRRC47-201ENST00000378251 CHRNA2Q15822 529 aa20■□□□□ 0.79
LRRC47-201ENST00000378251 MCM10Q7L590 875 aa20■□□□□ 0.79
LRRC47-201ENST00000378251 KIF16BQ96L93 1317 aa20■□□□□ 0.79
LRRC47-201ENST00000378251 FYB1O15117 783 aa19.99■□□□□ 0.79
LRRC47-201ENST00000378251 SMG6Q86US8 1419 aaKnown RBP19.99■□□□□ 0.79
LRRC47-201ENST00000378251 FAM177BA6PVY3 158 aa19.98■□□□□ 0.79
LRRC47-201ENST00000378251 FRAT2O75474 233 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms