RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 GJD4Q96KN9 370 aaPredicted RBP9.5□□□□□ -0.89
SSX3-203ENST00000376895 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
SSX3-203ENST00000376895 RNF40O75150 1001 aa9.49□□□□□ -0.89
SSX3-203ENST00000376895 LAPTM4BQ86VI4 370 aa9.49□□□□□ -0.89
SSX3-203ENST00000376895 TSC1Q92574 1164 aa9.49□□□□□ -0.89
SSX3-203ENST00000376895 ZBTB7CA1YPR0 619 aa9.48□□□□□ -0.89
SSX3-203ENST00000376895 POM121CA8CG34 1229 aa9.48□□□□□ -0.89
SSX3-203ENST00000376895 C6orf229H3BNL8 230 aa9.48□□□□□ -0.89
SSX3-203ENST00000376895 FUT2Q10981 343 aa9.48□□□□□ -0.89
SSX3-203ENST00000376895 DMRTA1Q5VZB9 504 aa9.48□□□□□ -0.89
SSX3-203ENST00000376895 CTDSPL2Q05D32 466 aa9.47□□□□□ -0.89
SSX3-203ENST00000376895 WASHC4Q2M389 1173 aa9.47□□□□□ -0.89
SSX3-203ENST00000376895 POTEEQ6S8J3 1075 aa9.47□□□□□ -0.89
SSX3-203ENST00000376895 SAMD7Q7Z3H4 446 aa9.47□□□□□ -0.89
SSX3-203ENST00000376895 NECTIN2Q92692 538 aa9.47□□□□□ -0.89
SSX3-203ENST00000376895 HMX1Q9NP08 348 aaPredicted RBP9.47□□□□□ -0.89
SSX3-203ENST00000376895 KMT5BQ4FZB7 885 aa9.46□□□□□ -0.9
SSX3-203ENST00000376895 VPS9D1Q9Y2B5 631 aa9.46□□□□□ -0.9
SSX3-203ENST00000376895 AXIN2Q9Y2T1 843 aa9.46□□□□□ -0.9
SSX3-203ENST00000376895 ATP6V1AP38606 617 aa9.45□□□□□ -0.9
SSX3-203ENST00000376895 OTUD5Q96G74 571 aa9.45□□□□□ -0.9
SSX3-203ENST00000376895 CFAP99D6REC4 459 aa9.44□□□□□ -0.9
SSX3-203ENST00000376895 PPP1R15AO75807 674 aaPredicted RBP9.44□□□□□ -0.9
SSX3-203ENST00000376895 EMP3P54852 163 aa9.44□□□□□ -0.9
SSX3-203ENST00000376895 IRF5Q13568 498 aa9.44□□□□□ -0.9
SSX3-203ENST00000376895 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
SSX3-203ENST00000376895 TRIM34Q9BYJ4 488 aa9.44□□□□□ -0.9
SSX3-203ENST00000376895 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
SSX3-203ENST00000376895 CECR2Q9BXF3 1484 aa9.41□□□□□ -0.9
SSX3-203ENST00000376895 GPR37L1O60883 481 aa9.41□□□□□ -0.9
SSX3-203ENST00000376895 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
SSX3-203ENST00000376895 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
SSX3-203ENST00000376895 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
SSX3-203ENST00000376895 ZFRQ96KR1 1074 aaKnown RBP9.41□□□□□ -0.9
SSX3-203ENST00000376895 TK2O00142 265 aa9.4□□□□□ -0.9
SSX3-203ENST00000376895 RETREG3Q86VR2 466 aa9.4□□□□□ -0.9
SSX3-203ENST00000376895 PRR14Q9BWN1 585 aa9.4□□□□□ -0.9
SSX3-203ENST00000376895 Q3C1V9 767 aa9.39□□□□□ -0.91
SSX3-203ENST00000376895 MRPL50Q8N5N7 158 aaKnown RBP9.39□□□□□ -0.91
SSX3-203ENST00000376895 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
SSX3-203ENST00000376895 LRCH3Q96II8 777 aa9.39□□□□□ -0.91
SSX3-203ENST00000376895 BAZ1AQ9NRL2 1556 aaPredicted RBP9.38□□□□□ -0.91
SSX3-203ENST00000376895 BHMG1C9JSJ3 638 aaPredicted RBP9.38□□□□□ -0.91
SSX3-203ENST00000376895 ST18O60284 1047 aa9.38□□□□□ -0.91
SSX3-203ENST00000376895 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
SSX3-203ENST00000376895 HDGFL1Q5TGJ6 251 aa9.38□□□□□ -0.91
SSX3-203ENST00000376895 PNMA1Q8ND90 353 aa9.38□□□□□ -0.91
SSX3-203ENST00000376895 ADAMTS19Q8TE59 1207 aa9.38□□□□□ -0.91
SSX3-203ENST00000376895 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
SSX3-203ENST00000376895 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
SSX3-203ENST00000376895 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.37□□□□□ -0.91
SSX3-203ENST00000376895 FAM205CA6NFA0 338 aa9.36□□□□□ -0.91
SSX3-203ENST00000376895 SOX11P35716 441 aa9.36□□□□□ -0.91
SSX3-203ENST00000376895 PDE4CQ08493 712 aa9.36□□□□□ -0.91
SSX3-203ENST00000376895 MORN1Q5T089 497 aa9.36□□□□□ -0.91
SSX3-203ENST00000376895 DESI1Q6ICB0 168 aa9.36□□□□□ -0.91
SSX3-203ENST00000376895 PBXIP1Q96AQ6 731 aa9.36□□□□□ -0.91
SSX3-203ENST00000376895 ACIN1Q9UKV3 1341 aaKnown RBP9.35□□□□□ -0.91
SSX3-203ENST00000376895 NR6A1Q15406 480 aa9.35□□□□□ -0.91
SSX3-203ENST00000376895 EPS8L1Q8TE68 723 aa9.35□□□□□ -0.91
SSX3-203ENST00000376895 MARVELD3Q96A59 401 aa9.35□□□□□ -0.91
SSX3-203ENST00000376895 RSF1Q96T23 1441 aaPredicted RBP9.35□□□□□ -0.91
SSX3-203ENST00000376895 PUS10Q3MIT2 529 aaKnown RBP9.34□□□□□ -0.91
SSX3-203ENST00000376895 SLC27A5Q9Y2P5 690 aa9.34□□□□□ -0.91
SSX3-203ENST00000376895 CCDC9Q9Y3X0 531 aaKnown RBP9.34□□□□□ -0.91
SSX3-203ENST00000376895 EIF4G1Q04637 1599 aaKnown RBP9.33□□□□□ -0.92
SSX3-203ENST00000376895 MROH2BQ7Z745 1585 aa9.33□□□□□ -0.92
SSX3-203ENST00000376895 PER1O15534 1290 aaPredicted RBP9.33□□□□□ -0.92
SSX3-203ENST00000376895 ADGRD1Q6QNK2 874 aa9.33□□□□□ -0.92
SSX3-203ENST00000376895 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
SSX3-203ENST00000376895 ANKK1Q8NFD2 765 aa9.32□□□□□ -0.92
SSX3-203ENST00000376895 PPP1R12CQ9BZL4 782 aa9.32□□□□□ -0.92
SSX3-203ENST00000376895 ALG2Q9H553 416 aa9.32□□□□□ -0.92
SSX3-203ENST00000376895 SMARCA4P51532 1647 aa9.31□□□□□ -0.92
SSX3-203ENST00000376895 LSM11P83369 360 aaKnown RBP eCLIP9.31□□□□□ -0.92
SSX3-203ENST00000376895 AEBP1Q8IUX7 1158 aa9.31□□□□□ -0.92
SSX3-203ENST00000376895 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
SSX3-203ENST00000376895 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.3□□□□□ -0.92
SSX3-203ENST00000376895 RFX1P22670 979 aa9.3□□□□□ -0.92
SSX3-203ENST00000376895 SEMA3FQ13275 785 aa9.3□□□□□ -0.92
SSX3-203ENST00000376895 LHX8Q68G74 356 aa9.3□□□□□ -0.92
SSX3-203ENST00000376895 RNF19BQ6ZMZ0 732 aa9.3□□□□□ -0.92
SSX3-203ENST00000376895 GOLGA8CPA6NN73 597 aa9.29□□□□□ -0.92
SSX3-203ENST00000376895 EIF4G2P78344 907 aaKnown RBP eCLIP9.29□□□□□ -0.92
SSX3-203ENST00000376895 LYPD8Q6UX82 237 aa9.29□□□□□ -0.92
SSX3-203ENST00000376895 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
SSX3-203ENST00000376895 USB1Q9BQ65 265 aaKnown RBP9.29□□□□□ -0.92
SSX3-203ENST00000376895 USTQ9Y2C2 406 aa9.29□□□□□ -0.92
SSX3-203ENST00000376895 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
SSX3-203ENST00000376895 PALM3A6NDB9 673 aaPredicted RBP9.28□□□□□ -0.92
SSX3-203ENST00000376895 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
SSX3-203ENST00000376895 RANGAP1P46060 587 aaPredicted RBP9.28□□□□□ -0.92
SSX3-203ENST00000376895 BLOC1S3Q6QNY0 202 aa9.28□□□□□ -0.92
SSX3-203ENST00000376895 UCN2Q96RP3 112 aa9.28□□□□□ -0.92
SSX3-203ENST00000376895 HPS5Q9UPZ3 1129 aa9.28□□□□□ -0.92
SSX3-203ENST00000376895 HRO43593 1189 aa9.27□□□□□ -0.93
SSX3-203ENST00000376895 PPP4CP60510 307 aa9.27□□□□□ -0.93
SSX3-203ENST00000376895 PCDHB3Q9Y5E6 796 aa9.27□□□□□ -0.93
SSX3-203ENST00000376895 ATAD2BQ9ULI0 1458 aa9.27□□□□□ -0.93
SSX3-203ENST00000376895 SMARCA2P51531 1590 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms