RNA–Protein interactions for RNA: ENST00000376802.2

HLA-A-201, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,334 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-201ENST00000376802 ANKRD30BQ9BXX2 1392 aa26.06■■□□□ 1.76
HLA-A-201ENST00000376802 TECPR2O15040 1411 aa26.05■■□□□ 1.76
HLA-A-201ENST00000376802 LRPPRCP42704 1394 aaKnown RBP26.04■■□□□ 1.76
HLA-A-201ENST00000376802 PIK3C2GO75747 1445 aa26.04■■□□□ 1.76
HLA-A-201ENST00000376802 WAPLQ7Z5K2 1190 aa26.03■■□□□ 1.76
HLA-A-201ENST00000376802 QTRT2Q9H974 415 aaKnown RBP26.03■■□□□ 1.76
HLA-A-201ENST00000376802 STK26Q9P289 416 aa26.03■■□□□ 1.76
HLA-A-201ENST00000376802 COL22A1Q8NFW1 1626 aaPredicted RBP26.03■■□□□ 1.76
HLA-A-201ENST00000376802 KNDC1Q76NI1 1749 aa26.02■■□□□ 1.76
HLA-A-201ENST00000376802 ADAMTS2O95450 1211 aa26.02■■□□□ 1.76
HLA-A-201ENST00000376802 TMEM132EQ6IEE7 984 aa26.02■■□□□ 1.76
HLA-A-201ENST00000376802 ABCC11Q96J66 1382 aa26.01■■□□□ 1.75
HLA-A-201ENST00000376802 ESCO1Q5FWF5 840 aa26■■□□□ 1.75
HLA-A-201ENST00000376802 PXDNQ92626 1479 aa25.99■■□□□ 1.75
HLA-A-201ENST00000376802 PLEKHH1Q9ULM0 1364 aa25.99■■□□□ 1.75
HLA-A-201ENST00000376802 NGLY1Q96IV0 654 aa25.99■■□□□ 1.75
HLA-A-201ENST00000376802 RBM6P78332 1123 aaKnown RBP25.98■■□□□ 1.75
HLA-A-201ENST00000376802 RGS12O14924 1447 aa25.98■■□□□ 1.75
HLA-A-201ENST00000376802 NPHP3Q7Z494 1330 aa25.96■■□□□ 1.75
HLA-A-201ENST00000376802 YTHDC2Q9H6S0 1430 aaKnown RBP25.96■■□□□ 1.75
HLA-A-201ENST00000376802 FOXO3O43524 673 aa25.95■■□□□ 1.75
HLA-A-201ENST00000376802 FMN2Q9NZ56 1722 aa25.95■■□□□ 1.74
HLA-A-201ENST00000376802 MYOM2P54296 1465 aa25.94■■□□□ 1.74
HLA-A-201ENST00000376802 NRXN1Q9ULB1 1477 aa25.94■■□□□ 1.74
HLA-A-201ENST00000376802 NUTM2FA1L443 756 aa25.93■■□□□ 1.74
HLA-A-201ENST00000376802 ACIN1Q9UKV3 1341 aaKnown RBP25.93■■□□□ 1.74
HLA-A-201ENST00000376802 XPCQ01831 940 aaPredicted RBP25.92■■□□□ 1.74
HLA-A-201ENST00000376802 FNBP4Q8N3X1 1017 aaPredicted RBP25.92■■□□□ 1.74
HLA-A-201ENST00000376802 C14orf93Q9H972 538 aaKnown RBP25.92■■□□□ 1.74
HLA-A-201ENST00000376802 MARF1Q9Y4F3 1742 aaKnown RBP25.92■■□□□ 1.74
HLA-A-201ENST00000376802 SIRT1Q96EB6 747 aa25.9■■□□□ 1.74
HLA-A-201ENST00000376802 USP21Q9UK80 565 aa25.9■■□□□ 1.74
HLA-A-201ENST00000376802 RGPD8O14715 1765 aaPredicted RBP25.9■■□□□ 1.74
HLA-A-201ENST00000376802 CFAP70Q5T0N1 1121 aa25.88■■□□□ 1.73
HLA-A-201ENST00000376802 RAB3GAP2Q9H2M9 1393 aa25.87■■□□□ 1.73
HLA-A-201ENST00000376802 TRPC5Q9UL62 973 aaPredicted RBP25.87■■□□□ 1.73
HLA-A-201ENST00000376802 KIF1AQ12756 1690 aa25.86■■□□□ 1.73
HLA-A-201ENST00000376802 ATRNO75882 1429 aa25.86■■□□□ 1.73
HLA-A-201ENST00000376802 BCL9LQ86UU0 1499 aa25.84■■□□□ 1.73
HLA-A-201ENST00000376802 DHX57Q6P158 1386 aaKnown RBP25.83■■□□□ 1.73
HLA-A-201ENST00000376802 SPATA31A3Q5VYP0 1347 aa25.82■■□□□ 1.72
HLA-A-201ENST00000376802 KRT28Q7Z3Y7 464 aa25.79■■□□□ 1.72
HLA-A-201ENST00000376802 PRAM1Q96QH2 718 aa25.79■■□□□ 1.72
HLA-A-201ENST00000376802 DLC1Q96QB1 1528 aa25.78■■□□□ 1.72
HLA-A-201ENST00000376802 SAFB2Q14151 953 aaKnown RBP eCLIP25.77■■□□□ 1.72
HLA-A-201ENST00000376802 ADGRB1O14514 1584 aa25.77■■□□□ 1.72
HLA-A-201ENST00000376802 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.76■■□□□ 1.71
HLA-A-201ENST00000376802 PHF8Q9UPP1 1060 aa25.76■■□□□ 1.71
HLA-A-201ENST00000376802 USP32Q8NFA0 1604 aa25.75■■□□□ 1.71
HLA-A-201ENST00000376802 EP400Q96L91 3159 aa25.75■■□□□ 1.71
HLA-A-201ENST00000376802 ATAD2Q6PL18 1390 aa25.74■■□□□ 1.71
HLA-A-201ENST00000376802 SLIT2O94813 1529 aa25.73■■□□□ 1.71
HLA-A-201ENST00000376802 GJD4Q96KN9 370 aaPredicted RBP25.72■■□□□ 1.71
HLA-A-201ENST00000376802 ADGRB2O60241 1585 aa25.71■■□□□ 1.71
HLA-A-201ENST00000376802 TNS3Q68CZ2 1445 aa25.71■■□□□ 1.71
HLA-A-201ENST00000376802 POGKQ9P215 609 aa25.7■■□□□ 1.71
HLA-A-201ENST00000376802 PSME1Q06323 249 aa25.69■■□□□ 1.7
HLA-A-201ENST00000376802 UNC5CLQ8IV45 518 aa25.69■■□□□ 1.7
HLA-A-201ENST00000376802 GLI3P10071 1580 aa25.69■■□□□ 1.7
HLA-A-201ENST00000376802 ANKARQ7Z5J8 1434 aa25.68■■□□□ 1.7
HLA-A-201ENST00000376802 CABLES1Q8TDN4 633 aa25.68■■□□□ 1.7
HLA-A-201ENST00000376802 ABCA3Q99758 1704 aa25.68■■□□□ 1.7
HLA-A-201ENST00000376802 KDM2AQ9Y2K7 1162 aa25.68■■□□□ 1.7
HLA-A-201ENST00000376802 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
HLA-A-201ENST00000376802 DCAF11Q8TEB1 546 aa25.67■■□□□ 1.7
HLA-A-201ENST00000376802 TRAK1Q9UPV9 953 aa25.67■■□□□ 1.7
HLA-A-201ENST00000376802 HRCP23327 699 aa25.66■■□□□ 1.7
HLA-A-201ENST00000376802 RALGAPBQ86X10 1494 aa25.66■■□□□ 1.7
HLA-A-201ENST00000376802 PMFBP1Q8TBY8 1022 aa25.65■■□□□ 1.7
HLA-A-201ENST00000376802 TRPM3Q9HCF6 1732 aaPredicted RBP25.65■■□□□ 1.7
HLA-A-201ENST00000376802 HIRIP3Q9BW71 556 aaPredicted RBP25.64■■□□□ 1.7
HLA-A-201ENST00000376802 PLCH1Q4KWH8 1693 aa25.64■■□□□ 1.69
HLA-A-201ENST00000376802 BRWD3Q6RI45 1802 aa25.63■■□□□ 1.69
HLA-A-201ENST00000376802 MINK1Q8N4C8 1332 aaPredicted RBP25.62■■□□□ 1.69
HLA-A-201ENST00000376802 PRR36Q9H6K5 1346 aa25.62■■□□□ 1.69
HLA-A-201ENST00000376802 NWD2Q9ULI1 1742 aa25.62■■□□□ 1.69
HLA-A-201ENST00000376802 ARHGEF10O15013 1369 aa25.62■■□□□ 1.69
HLA-A-201ENST00000376802 STAC3Q96MF2 364 aa25.62■■□□□ 1.69
HLA-A-201ENST00000376802 PLEKHG5O94827 1062 aa25.61■■□□□ 1.69
HLA-A-201ENST00000376802 LMOD2Q6P5Q4 547 aa25.61■■□□□ 1.69
HLA-A-201ENST00000376802 ALS2Q96Q42 1657 aa25.6■■□□□ 1.69
HLA-A-201ENST00000376802 HAP1P54257 671 aaPredicted RBP25.6■■□□□ 1.69
HLA-A-201ENST00000376802 TULP4Q9NRJ4 1543 aa25.59■■□□□ 1.69
HLA-A-201ENST00000376802 SRCAPQ6ZRS2 3230 aa25.58■■□□□ 1.69
HLA-A-201ENST00000376802 ARHGEF28Q8N1W1 1705 aaKnown RBP25.58■■□□□ 1.69
HLA-A-201ENST00000376802 CCDC125Q86Z20 511 aa25.58■■□□□ 1.69
HLA-A-201ENST00000376802 FAM83GA6ND36 823 aa25.57■■□□□ 1.68
HLA-A-201ENST00000376802 WASLO00401 505 aaPredicted RBP25.57■■□□□ 1.68
HLA-A-201ENST00000376802 VPS72Q15906 364 aa25.57■■□□□ 1.68
HLA-A-201ENST00000376802 EIF3AQ14152 1382 aaKnown RBP25.55■■□□□ 1.68
HLA-A-201ENST00000376802 ONECUT3O60422 494 aaPredicted RBP25.54■■□□□ 1.68
HLA-A-201ENST00000376802 CRYBG1Q9Y4K1 1723 aa25.53■■□□□ 1.68
HLA-A-201ENST00000376802 GPRASP1Q5JY77 1395 aa25.52■■□□□ 1.68
HLA-A-201ENST00000376802 NRAPQ86VF7 1730 aa25.52■■□□□ 1.68
HLA-A-201ENST00000376802 SEPT12Q8IYM1 358 aa25.52■■□□□ 1.68
HLA-A-201ENST00000376802 ITSN1Q15811 1721 aa25.49■■□□□ 1.67
HLA-A-201ENST00000376802 ATP7BP35670 1465 aa25.49■■□□□ 1.67
HLA-A-201ENST00000376802 COL14A1Q05707 1796 aaKnown RBP25.48■■□□□ 1.67
HLA-A-201ENST00000376802 BLMP54132 1417 aaPredicted RBP25.48■■□□□ 1.67
HLA-A-201ENST00000376802 NGDNQ8NEJ9 315 aaKnown RBP25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms