RNA–Protein interactions for RNA: ENST00000375641.6

C6orf48-206, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-206ENST00000375641 WAPLQ7Z5K2 1190 aa27.83■■■□□ 2.05
C6orf48-206ENST00000375641 ESCO1Q5FWF5 840 aa27.82■■■□□ 2.04
C6orf48-206ENST00000375641 TMEM132EQ6IEE7 984 aa27.82■■■□□ 2.04
C6orf48-206ENST00000375641 QTRT2Q9H974 415 aaKnown RBP27.82■■■□□ 2.04
C6orf48-206ENST00000375641 LRPPRCP42704 1394 aaKnown RBP27.82■■■□□ 2.04
C6orf48-206ENST00000375641 NGLY1Q96IV0 654 aa27.8■■■□□ 2.04
C6orf48-206ENST00000375641 ACIN1Q9UKV3 1341 aaKnown RBP27.8■■■□□ 2.04
C6orf48-206ENST00000375641 ABCC11Q96J66 1382 aa27.8■■■□□ 2.04
C6orf48-206ENST00000375641 CDK12Q9NYV4 1490 aaPredicted RBP27.8■■■□□ 2.04
C6orf48-206ENST00000375641 TECPR2O15040 1411 aa27.78■■■□□ 2.04
C6orf48-206ENST00000375641 RBM6P78332 1123 aaKnown RBP27.77■■■□□ 2.04
C6orf48-206ENST00000375641 CDC42BPGQ6DT37 1551 aa27.77■■■□□ 2.04
C6orf48-206ENST00000375641 PIK3C2GO75747 1445 aa27.76■■■□□ 2.04
C6orf48-206ENST00000375641 NPHP3Q7Z494 1330 aa27.76■■■□□ 2.03
C6orf48-206ENST00000375641 IFT172Q9UG01 1749 aa27.75■■■□□ 2.03
C6orf48-206ENST00000375641 PLEKHH1Q9ULM0 1364 aa27.74■■■□□ 2.03
C6orf48-206ENST00000375641 NUTM2FA1L443 756 aa27.74■■■□□ 2.03
C6orf48-206ENST00000375641 FOXO3O43524 673 aa27.74■■■□□ 2.03
C6orf48-206ENST00000375641 C14orf93Q9H972 538 aaKnown RBP27.73■■■□□ 2.03
C6orf48-206ENST00000375641 XPCQ01831 940 aaPredicted RBP27.71■■■□□ 2.03
C6orf48-206ENST00000375641 SIRT1Q96EB6 747 aa27.71■■■□□ 2.03
C6orf48-206ENST00000375641 YTHDC2Q9H6S0 1430 aaKnown RBP27.71■■■□□ 2.03
C6orf48-206ENST00000375641 USP21Q9UK80 565 aa27.7■■■□□ 2.02
C6orf48-206ENST00000375641 RGS12O14924 1447 aa27.69■■■□□ 2.02
C6orf48-206ENST00000375641 FNBP4Q8N3X1 1017 aaPredicted RBP27.69■■■□□ 2.02
C6orf48-206ENST00000375641 PXDNQ92626 1479 aa27.69■■■□□ 2.02
C6orf48-206ENST00000375641 CFAP70Q5T0N1 1121 aa27.68■■■□□ 2.02
C6orf48-206ENST00000375641 TRPC5Q9UL62 973 aaPredicted RBP27.66■■■□□ 2.02
C6orf48-206ENST00000375641 COL22A1Q8NFW1 1626 aaPredicted RBP27.66■■■□□ 2.02
C6orf48-206ENST00000375641 MYOM2P54296 1465 aa27.65■■■□□ 2.02
C6orf48-206ENST00000375641 RAB3GAP2Q9H2M9 1393 aa27.65■■■□□ 2.02
C6orf48-206ENST00000375641 KNDC1Q76NI1 1749 aa27.65■■■□□ 2.02
C6orf48-206ENST00000375641 NRXN1Q9ULB1 1477 aa27.64■■■□□ 2.02
C6orf48-206ENST00000375641 DHX57Q6P158 1386 aaKnown RBP27.64■■■□□ 2.02
C6orf48-206ENST00000375641 ATRNO75882 1429 aa27.58■■■□□ 2.01
C6orf48-206ENST00000375641 KRT28Q7Z3Y7 464 aa27.58■■■□□ 2.01
C6orf48-206ENST00000375641 PRAM1Q96QH2 718 aa27.58■■■□□ 2.01
C6orf48-206ENST00000375641 SPATA31A3Q5VYP0 1347 aa27.58■■■□□ 2.01
C6orf48-206ENST00000375641 FMN2Q9NZ56 1722 aa27.58■■■□□ 2.01
C6orf48-206ENST00000375641 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
C6orf48-206ENST00000375641 PHF8Q9UPP1 1060 aa27.56■■■□□ 2
C6orf48-206ENST00000375641 BCL9LQ86UU0 1499 aa27.56■■■□□ 2
C6orf48-206ENST00000375641 POGKQ9P215 609 aa27.53■■■□□ 2
C6orf48-206ENST00000375641 PSME1Q06323 249 aa27.51■■□□□ 1.99
C6orf48-206ENST00000375641 KIF1AQ12756 1690 aa27.51■■□□□ 1.99
C6orf48-206ENST00000375641 ATAD2Q6PL18 1390 aa27.5■■□□□ 1.99
C6orf48-206ENST00000375641 GJD4Q96KN9 370 aaPredicted RBP27.49■■□□□ 1.99
C6orf48-206ENST00000375641 KDM2AQ9Y2K7 1162 aa27.49■■□□□ 1.99
C6orf48-206ENST00000375641 DLC1Q96QB1 1528 aa27.48■■□□□ 1.99
C6orf48-206ENST00000375641 TRAK1Q9UPV9 953 aa27.48■■□□□ 1.99
C6orf48-206ENST00000375641 HRCP23327 699 aa27.47■■□□□ 1.99
C6orf48-206ENST00000375641 UNC5CLQ8IV45 518 aa27.47■■□□□ 1.99
C6orf48-206ENST00000375641 DCAF11Q8TEB1 546 aa27.47■■□□□ 1.99
C6orf48-206ENST00000375641 MARF1Q9Y4F3 1742 aaKnown RBP27.46■■□□□ 1.99
C6orf48-206ENST00000375641 SBNO1A3KN83 1393 aa27.45■■□□□ 1.98
C6orf48-206ENST00000375641 RGPD8O14715 1765 aaPredicted RBP27.45■■□□□ 1.98
C6orf48-206ENST00000375641 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
C6orf48-206ENST00000375641 TNS3Q68CZ2 1445 aa27.44■■□□□ 1.98
C6orf48-206ENST00000375641 PMFBP1Q8TBY8 1022 aa27.44■■□□□ 1.98
C6orf48-206ENST00000375641 CABLES1Q8TDN4 633 aa27.44■■□□□ 1.98
C6orf48-206ENST00000375641 SLIT2O94813 1529 aa27.43■■□□□ 1.98
C6orf48-206ENST00000375641 STAC3Q96MF2 364 aa27.43■■□□□ 1.98
C6orf48-206ENST00000375641 ANKARQ7Z5J8 1434 aa27.42■■□□□ 1.98
C6orf48-206ENST00000375641 HAP1P54257 671 aaPredicted RBP27.42■■□□□ 1.98
C6orf48-206ENST00000375641 LMOD2Q6P5Q4 547 aa27.42■■□□□ 1.98
C6orf48-206ENST00000375641 HIRIP3Q9BW71 556 aaPredicted RBP27.42■■□□□ 1.98
C6orf48-206ENST00000375641 PLEKHG5O94827 1062 aa27.4■■□□□ 1.98
C6orf48-206ENST00000375641 MINK1Q8N4C8 1332 aaPredicted RBP27.4■■□□□ 1.98
C6orf48-206ENST00000375641 ARHGEF10O15013 1369 aa27.38■■□□□ 1.97
C6orf48-206ENST00000375641 USP32Q8NFA0 1604 aa27.38■■□□□ 1.97
C6orf48-206ENST00000375641 RALGAPBQ86X10 1494 aa27.37■■□□□ 1.97
C6orf48-206ENST00000375641 ADGRB2O60241 1585 aa27.36■■□□□ 1.97
C6orf48-206ENST00000375641 PRR36Q9H6K5 1346 aa27.36■■□□□ 1.97
C6orf48-206ENST00000375641 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.36■■□□□ 1.97
C6orf48-206ENST00000375641 WASLO00401 505 aaPredicted RBP27.35■■□□□ 1.97
C6orf48-206ENST00000375641 CCDC125Q86Z20 511 aa27.34■■□□□ 1.97
C6orf48-206ENST00000375641 VPS72Q15906 364 aa27.33■■□□□ 1.97
C6orf48-206ENST00000375641 GLI3P10071 1580 aa27.33■■□□□ 1.97
C6orf48-206ENST00000375641 EP400Q96L91 3159 aa27.33■■□□□ 1.97
C6orf48-206ENST00000375641 EIF3AQ14152 1382 aaKnown RBP27.33■■□□□ 1.97
C6orf48-206ENST00000375641 FAM83GA6ND36 823 aa27.32■■□□□ 1.96
C6orf48-206ENST00000375641 GPRASP1Q5JY77 1395 aa27.31■■□□□ 1.96
C6orf48-206ENST00000375641 TULP4Q9NRJ4 1543 aa27.28■■□□□ 1.96
C6orf48-206ENST00000375641 SEPT12Q8IYM1 358 aa27.28■■□□□ 1.96
C6orf48-206ENST00000375641 ONECUT3O60422 494 aaPredicted RBP27.27■■□□□ 1.96
C6orf48-206ENST00000375641 NGDNQ8NEJ9 315 aaKnown RBP27.27■■□□□ 1.96
C6orf48-206ENST00000375641 CCDC9Q9Y3X0 531 aaKnown RBP27.27■■□□□ 1.96
C6orf48-206ENST00000375641 ABCA3Q99758 1704 aa27.24■■□□□ 1.95
C6orf48-206ENST00000375641 TRPM3Q9HCF6 1732 aaPredicted RBP27.24■■□□□ 1.95
C6orf48-206ENST00000375641 NUDT16Q96DE0 195 aaKnown RBP27.23■■□□□ 1.95
C6orf48-206ENST00000375641 ZRANB1Q9UGI0 708 aa27.23■■□□□ 1.95
C6orf48-206ENST00000375641 NWD2Q9ULI1 1742 aa27.22■■□□□ 1.95
C6orf48-206ENST00000375641 PAK3O75914 559 aaPredicted RBP27.22■■□□□ 1.95
C6orf48-206ENST00000375641 PLCH1Q4KWH8 1693 aa27.21■■□□□ 1.95
C6orf48-206ENST00000375641 BTG4Q9NY30 223 aa27.21■■□□□ 1.95
C6orf48-206ENST00000375641 SRCAPQ6ZRS2 3230 aa27.2■■□□□ 1.94
C6orf48-206ENST00000375641 CDK19Q9BWU1 502 aa27.2■■□□□ 1.94
C6orf48-206ENST00000375641 BLMP54132 1417 aaPredicted RBP27.19■■□□□ 1.94
C6orf48-206ENST00000375641 ALS2Q96Q42 1657 aa27.19■■□□□ 1.94
C6orf48-206ENST00000375641 KRT27Q7Z3Y8 459 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms