RNA–Protein interactions for RNA: ENST00000374946.7

TMEM235-201, Transcript of transmembrane protein 235, humanhuman

TSL 5 BASIC

Gene TMEM235, Length 2,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235-201ENST00000374946 TNNQ9UQP3 1299 aa24.44■■□□□ 1.5
TMEM235-201ENST00000374946 MCM4P33991 863 aa24.42■■□□□ 1.5
TMEM235-201ENST00000374946 TRPM2O94759 1503 aa24.42■■□□□ 1.5
TMEM235-201ENST00000374946 SPRYD3Q8NCJ5 442 aa24.42■■□□□ 1.5
TMEM235-201ENST00000374946 STAC3Q96MF2 364 aa24.42■■□□□ 1.5
TMEM235-201ENST00000374946 PTPRTO14522 1441 aa24.41■■□□□ 1.5
TMEM235-201ENST00000374946 CLTCL1P53675 1640 aa24.41■■□□□ 1.5
TMEM235-201ENST00000374946 SHPRHQ149N8 1683 aa24.41■■□□□ 1.5
TMEM235-201ENST00000374946 POLR3AO14802 1390 aaPredicted RBP24.41■■□□□ 1.5
TMEM235-201ENST00000374946 NEUROD2Q15784 382 aa24.4■■□□□ 1.5
TMEM235-201ENST00000374946 PANK2Q9BZ23 570 aa24.4■■□□□ 1.5
TMEM235-201ENST00000374946 GZF1Q9H116 711 aaPredicted RBP24.39■■□□□ 1.5
TMEM235-201ENST00000374946 ERVK-7P63135 1459 aa24.39■■□□□ 1.49
TMEM235-201ENST00000374946 RWDD1Q9H446 243 aaPredicted RBP24.38■■□□□ 1.49
TMEM235-201ENST00000374946 RRP7AQ9Y3A4 280 aaKnown RBP24.38■■□□□ 1.49
TMEM235-201ENST00000374946 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
TMEM235-201ENST00000374946 TET3O43151 1660 aa24.38■■□□□ 1.49
TMEM235-201ENST00000374946 VWDEQ8N2E2 1590 aa24.38■■□□□ 1.49
TMEM235-201ENST00000374946 BCL2L13Q9BXK5 485 aa24.37■■□□□ 1.49
TMEM235-201ENST00000374946 MROH1Q8NDA8 1641 aa24.36■■□□□ 1.49
TMEM235-201ENST00000374946 KANK1Q14678 1352 aa24.35■■□□□ 1.49
TMEM235-201ENST00000374946 KIDINS220Q9ULH0 1771 aa24.34■■□□□ 1.49
TMEM235-201ENST00000374946 UGGT1Q9NYU2 1555 aa24.34■■□□□ 1.49
TMEM235-201ENST00000374946 CLCN1P35523 988 aa24.34■■□□□ 1.49
TMEM235-201ENST00000374946 RUNDC1Q96C34 613 aa24.33■■□□□ 1.49
TMEM235-201ENST00000374946 PNNQ9H307 717 aaKnown RBP24.33■■□□□ 1.49
TMEM235-201ENST00000374946 CHMP5Q9NZZ3 219 aa24.33■■□□□ 1.49
TMEM235-201ENST00000374946 TRAK2O60296 914 aa24.33■■□□□ 1.48
TMEM235-201ENST00000374946 NPM1P06748 294 aaKnown RBP eCLIP24.33■■□□□ 1.48
TMEM235-201ENST00000374946 TCP11L2Q8N4U5 519 aa24.33■■□□□ 1.48
TMEM235-201ENST00000374946 IQSEC2Q5JU85 1478 aa24.32■■□□□ 1.48
TMEM235-201ENST00000374946 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
TMEM235-201ENST00000374946 SLC24A1O60721 1099 aa24.32■■□□□ 1.48
TMEM235-201ENST00000374946 C22orf23Q9BZE7 217 aa24.32■■□□□ 1.48
TMEM235-201ENST00000374946 NAP1L5Q96NT1 182 aaPredicted RBP24.31■■□□□ 1.48
TMEM235-201ENST00000374946 WDR63Q8IWG1 891 aa24.31■■□□□ 1.48
TMEM235-201ENST00000374946 CFAP70Q5T0N1 1121 aa24.3■■□□□ 1.48
TMEM235-201ENST00000374946 ABCA6Q8N139 1617 aa24.29■■□□□ 1.48
TMEM235-201ENST00000374946 MFAP1P55081 439 aaKnown RBP24.29■■□□□ 1.48
TMEM235-201ENST00000374946 MRE11P49959 708 aa24.28■■□□□ 1.48
TMEM235-201ENST00000374946 MVPQ14764 893 aaKnown RBP24.28■■□□□ 1.48
TMEM235-201ENST00000374946 CD109Q6YHK3 1445 aa24.27■■□□□ 1.48
TMEM235-201ENST00000374946 TNNT2P45379 298 aaPredicted RBP24.27■■□□□ 1.48
TMEM235-201ENST00000374946 ZNF518AQ6AHZ1 1483 aa24.27■■□□□ 1.48
TMEM235-201ENST00000374946 RIMBP3CA6NJZ7 1639 aa24.27■■□□□ 1.47
TMEM235-201ENST00000374946 RIMBP3BA6NNM3 1639 aa24.27■■□□□ 1.47
TMEM235-201ENST00000374946 RIMBP3Q9UFD9 1639 aa24.27■■□□□ 1.47
TMEM235-201ENST00000374946 MORC1Q86VD1 984 aa24.26■■□□□ 1.47
TMEM235-201ENST00000374946 MAP3K4Q9Y6R4 1608 aa24.25■■□□□ 1.47
TMEM235-201ENST00000374946 PPRC1Q5VV67 1664 aaKnown RBP24.23■■□□□ 1.47
TMEM235-201ENST00000374946 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
TMEM235-201ENST00000374946 NSD3Q9BZ95 1437 aa24.23■■□□□ 1.47
TMEM235-201ENST00000374946 EFCAB6Q5THR3 1501 aa24.23■■□□□ 1.47
TMEM235-201ENST00000374946 ZNF692Q9BU19 519 aaPredicted RBP24.22■■□□□ 1.47
TMEM235-201ENST00000374946 GRPEL1Q9HAV7 217 aa24.22■■□□□ 1.47
TMEM235-201ENST00000374946 ZKSCAN2Q63HK3 967 aa24.22■■□□□ 1.47
TMEM235-201ENST00000374946 ADGRF5Q8IZF2 1346 aa24.21■■□□□ 1.47
TMEM235-201ENST00000374946 DDX11L8A8MPP1 907 aa24.21■■□□□ 1.47
TMEM235-201ENST00000374946 MYO3AQ8NEV4 1616 aa24.21■■□□□ 1.47
TMEM235-201ENST00000374946 POGZQ7Z3K3 1410 aa24.21■■□□□ 1.47
TMEM235-201ENST00000374946 HSCBQ8IWL3 235 aa24.21■■□□□ 1.47
TMEM235-201ENST00000374946 FTSJ3Q8IY81 847 aaKnown RBP24.21■■□□□ 1.47
TMEM235-201ENST00000374946 DZIP1LQ8IYY4 767 aaKnown RBP24.21■■□□□ 1.47
TMEM235-201ENST00000374946 MYH16Q9H6N6 1097 aa24.21■■□□□ 1.47
TMEM235-201ENST00000374946 GLIPR1L2Q4G1C9 344 aa24.19■■□□□ 1.46
TMEM235-201ENST00000374946 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
TMEM235-201ENST00000374946 MYOM2P54296 1465 aa24.18■■□□□ 1.46
TMEM235-201ENST00000374946 GGT6Q6P531 493 aa24.18■■□□□ 1.46
TMEM235-201ENST00000374946 SBNO2Q9Y2G9 1366 aa24.18■■□□□ 1.46
TMEM235-201ENST00000374946 HSP90AA1P07900 732 aaKnown RBP24.18■■□□□ 1.46
TMEM235-201ENST00000374946 CYB5RLQ6IPT4 315 aa24.18■■□□□ 1.46
TMEM235-201ENST00000374946 IFT172Q9UG01 1749 aa24.17■■□□□ 1.46
TMEM235-201ENST00000374946 CFAP65Q6ZU64 1925 aaKnown RBP24.17■■□□□ 1.46
TMEM235-201ENST00000374946 MTHFSP49914 203 aa24.17■■□□□ 1.46
TMEM235-201ENST00000374946 RAPGEF3O95398 923 aa24.16■■□□□ 1.46
TMEM235-201ENST00000374946 HDAC1Q13547 482 aaPredicted RBP24.16■■□□□ 1.46
TMEM235-201ENST00000374946 ISY1Q9ULR0 285 aaKnown RBP24.16■■□□□ 1.46
TMEM235-201ENST00000374946 NEURL4Q96JN8 1562 aa24.16■■□□□ 1.46
TMEM235-201ENST00000374946 NCOA3Q9Y6Q9 1424 aa24.16■■□□□ 1.46
TMEM235-201ENST00000374946 MROH2AA6NES4 1674 aa24.16■■□□□ 1.46
TMEM235-201ENST00000374946 ESPNB1AK53 854 aa24.15■■□□□ 1.46
TMEM235-201ENST00000374946 DDIT3P35638 169 aa24.15■■□□□ 1.46
TMEM235-201ENST00000374946 SLC12A5Q9H2X9 1139 aa24.15■■□□□ 1.46
TMEM235-201ENST00000374946 HSP90AA2PQ14568 343 aaPredicted RBP24.14■■□□□ 1.46
TMEM235-201ENST00000374946 ERBB4Q15303 1308 aa24.14■■□□□ 1.45
TMEM235-201ENST00000374946 KIF1BO60333 1816 aa24.14■■□□□ 1.45
TMEM235-201ENST00000374946 MLH3Q9UHC1 1453 aa24.13■■□□□ 1.45
TMEM235-201ENST00000374946 LMTK2Q8IWU2 1503 aa24.12■■□□□ 1.45
TMEM235-201ENST00000374946 RRP9O43818 475 aaKnown RBP24.12■■□□□ 1.45
TMEM235-201ENST00000374946 CFAP53Q96M91 514 aa24.12■■□□□ 1.45
TMEM235-201ENST00000374946 CHGAP10645 457 aaKnown RBP24.12■■□□□ 1.45
TMEM235-201ENST00000374946 TRIM27P14373 513 aa24.12■■□□□ 1.45
TMEM235-201ENST00000374946 ZC3H13Q5T200 1668 aaKnown RBP24.12■■□□□ 1.45
TMEM235-201ENST00000374946 NPATQ14207 1427 aa24.11■■□□□ 1.45
TMEM235-201ENST00000374946 TSR2Q969E8 191 aaKnown RBP24.11■■□□□ 1.45
TMEM235-201ENST00000374946 SMC4Q9NTJ3 1288 aa24.11■■□□□ 1.45
TMEM235-201ENST00000374946 HECW2Q9P2P5 1572 aa24.11■■□□□ 1.45
TMEM235-201ENST00000374946 NCBP3Q53F19 620 aaKnown RBP24.11■■□□□ 1.45
TMEM235-201ENST00000374946 SMC5Q8IY18 1101 aa24.11■■□□□ 1.45
TMEM235-201ENST00000374946 CFAP74Q9C0B2 1584 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms