RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
PHACTR4-202ENST00000373839 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
PHACTR4-202ENST00000373839 GPS2Q13227 327 aa13.45□□□□□ -0.26
PHACTR4-202ENST00000373839 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.263e-6■■■■□ 24.1
PHACTR4-202ENST00000373839 PDE4AP27815 886 aa13.44□□□□□ -0.26
PHACTR4-202ENST00000373839 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
PHACTR4-202ENST00000373839 SART3Q15020 963 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-202ENST00000373839 IFT140Q96RY7 1462 aa13.44□□□□□ -0.26
PHACTR4-202ENST00000373839 TATP17735 454 aaPredicted RBP13.44□□□□□ -0.26
PHACTR4-202ENST00000373839 NUCB2P80303 420 aa13.44□□□□□ -0.26
PHACTR4-202ENST00000373839 HIP1O00291 1037 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 PSMA5P28066 241 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 CNTLNQ9NXG0 1405 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 PDE4CQ08493 712 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 SF3B2Q13435 895 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 PCMTD1Q96MG8 357 aaPredicted RBP13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 GGNBP2Q9H3C7 697 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 SMC3Q9UQE7 1217 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 PRG4Q92954 1404 aaPredicted RBP13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 SLC3A2P08195 630 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 CCDC7Q96M83 1385 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 ERC1Q8IUD2 1116 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 NEUROD6Q96NK8 337 aa13.43□□□□□ -0.26
PHACTR4-202ENST00000373839 NCOA2Q15596 1464 aa13.42□□□□□ -0.26
PHACTR4-202ENST00000373839 ESCO1Q5FWF5 840 aa13.42□□□□□ -0.26
PHACTR4-202ENST00000373839 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
PHACTR4-202ENST00000373839 BRD4O60885 1362 aaPredicted RBP13.42□□□□□ -0.26
PHACTR4-202ENST00000373839 WASHC4Q2M389 1173 aa13.42□□□□□ -0.26
PHACTR4-202ENST00000373839 CCDC73Q6ZRK6 1079 aa13.42□□□□□ -0.26
PHACTR4-202ENST00000373839 LRRC9Q6ZRR7 1453 aa13.42□□□□□ -0.26
PHACTR4-202ENST00000373839 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 EXOC6Q8TAG9 804 aa13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 PHF23Q9BUL5 403 aaPredicted RBP13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 RPGRIP1LQ68CZ1 1315 aa13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 GNL3LQ9NVN8 582 aaKnown RBP13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 RUSC2Q8N2Y8 1516 aa13.41□□□□□ -0.26
PHACTR4-202ENST00000373839 HMOX1P09601 288 aa13.4□□□□□ -0.26
PHACTR4-202ENST00000373839 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
PHACTR4-202ENST00000373839 KLHL34Q8N239 644 aa13.4□□□□□ -0.26
PHACTR4-202ENST00000373839 KIF21BO75037 1637 aa13.4□□□□□ -0.26
PHACTR4-202ENST00000373839 CNKSR2Q8WXI2 1034 aa13.4□□□□□ -0.26
PHACTR4-202ENST00000373839 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
PHACTR4-202ENST00000373839 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
PHACTR4-202ENST00000373839 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 CDC45O75419 566 aa13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 ANKLE2Q86XL3 938 aa13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 AIMP1Q12904 312 aaKnown RBP13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 AFAP1Q8N556 730 aa13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 CCDC27Q2M243 656 aa13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 ZNF644Q9H582 1327 aaPredicted RBP13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 PLIN1O60240 522 aa13.39□□□□□ -0.27
PHACTR4-202ENST00000373839 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
PHACTR4-202ENST00000373839 EFCAB5A4FU69 1503 aa13.38□□□□□ -0.27
PHACTR4-202ENST00000373839 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
PHACTR4-202ENST00000373839 ERICH3Q5RHP9 1530 aa13.37□□□□□ -0.27
PHACTR4-202ENST00000373839 VPS37CA5D8V6 355 aaPredicted RBP13.37□□□□□ -0.27
PHACTR4-202ENST00000373839 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
PHACTR4-202ENST00000373839 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
PHACTR4-202ENST00000373839 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
PHACTR4-202ENST00000373839 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
PHACTR4-202ENST00000373839 CT47B1P0C2W7 299 aaPredicted RBP13.36□□□□□ -0.27
PHACTR4-202ENST00000373839 TNNT3P45378 269 aaPredicted RBP13.36□□□□□ -0.27
PHACTR4-202ENST00000373839 MTHFSP49914 203 aa13.36□□□□□ -0.27
PHACTR4-202ENST00000373839 TMEM132EQ6IEE7 984 aa13.36□□□□□ -0.27
PHACTR4-202ENST00000373839 MCM2P49736 904 aa13.36□□□□□ -0.27
PHACTR4-202ENST00000373839 CDR1P51861 262 aa13.35□□□□□ -0.27
PHACTR4-202ENST00000373839 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
PHACTR4-202ENST00000373839 NAT10Q9H0A0 1025 aaKnown RBP13.35□□□□□ -0.27
PHACTR4-202ENST00000373839 RBM42Q9BTD8 480 aaKnown RBP13.35□□□□□ -0.27
PHACTR4-202ENST00000373839 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.35□□□□□ -0.27
PHACTR4-202ENST00000373839 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
PHACTR4-202ENST00000373839 PDCP20941 246 aa13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 CCDC158Q5M9N0 1113 aa13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 RDXP35241 583 aaKnown RBP13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 CT47A1Q5JQC4 288 aaPredicted RBP13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 PRAM1Q96QH2 718 aa13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 CCAR2Q8N163 923 aaKnown RBP13.34□□□□□ -0.27
PHACTR4-202ENST00000373839 TROQ12816 1431 aaPredicted RBP13.33□□□□□ -0.27
PHACTR4-202ENST00000373839 SURF6O75683 361 aaKnown RBP13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 WWC2Q6AWC2 1192 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 OLFM4Q6UX06 510 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 TCP11L2Q8N4U5 519 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 EHBP1L1Q8N3D4 1523 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 C9orf84Q5VXU9 1444 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 CFTRP13569 1480 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 ODF2Q5BJF6 829 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 LNPKQ9C0E8 428 aa13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 PIP4K2AP48426 406 aaPredicted RBP13.33□□□□□ -0.28
PHACTR4-202ENST00000373839 CCT4P50991 539 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms