RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 ORAI2Q96SN7 254 aa22.58■■□□□ 1.21
CDKN1A-202ENST00000373711 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
CDKN1A-202ENST00000373711 ROBO2Q9HCK4 1378 aa22.57■■□□□ 1.2
CDKN1A-202ENST00000373711 EP400Q96L91 3159 aa22.57■■□□□ 1.2
CDKN1A-202ENST00000373711 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.57■■□□□ 1.2
CDKN1A-202ENST00000373711 CDC42BPGQ6DT37 1551 aa22.56■■□□□ 1.2
CDKN1A-202ENST00000373711 MYOM2P54296 1465 aa22.56■■□□□ 1.2
CDKN1A-202ENST00000373711 PPLO60437 1756 aa22.53■■□□□ 1.2
CDKN1A-202ENST00000373711 LRPPRCP42704 1394 aaKnown RBP22.53■■□□□ 1.2
CDKN1A-202ENST00000373711 RPGRIP1LQ68CZ1 1315 aa22.53■■□□□ 1.2
CDKN1A-202ENST00000373711 BCL9LQ86UU0 1499 aa22.5■■□□□ 1.19
CDKN1A-202ENST00000373711 PXDNQ92626 1479 aa22.5■■□□□ 1.19
CDKN1A-202ENST00000373711 ESCO1Q5FWF5 840 aa22.5■■□□□ 1.19
CDKN1A-202ENST00000373711 GJD4Q96KN9 370 aaPredicted RBP22.48■■□□□ 1.19
CDKN1A-202ENST00000373711 BLMP54132 1417 aaPredicted RBP22.46■■□□□ 1.19
CDKN1A-202ENST00000373711 KIF1AQ12756 1690 aa22.46■■□□□ 1.19
CDKN1A-202ENST00000373711 FOXO3O43524 673 aa22.42■■□□□ 1.18
CDKN1A-202ENST00000373711 SF3B2Q13435 895 aaKnown RBP22.42■■□□□ 1.18
CDKN1A-202ENST00000373711 KNDC1Q76NI1 1749 aa22.42■■□□□ 1.18
CDKN1A-202ENST00000373711 NAIPQ13075 1403 aa22.41■■□□□ 1.18
CDKN1A-202ENST00000373711 BRWD3Q6RI45 1802 aa22.41■■□□□ 1.18
CDKN1A-202ENST00000373711 UNC5CLQ8IV45 518 aa22.41■■□□□ 1.18
CDKN1A-202ENST00000373711 USP32Q8NFA0 1604 aa22.41■■□□□ 1.18
CDKN1A-202ENST00000373711 GLI3P10071 1580 aa22.41■■□□□ 1.18
CDKN1A-202ENST00000373711 RALGAPBQ86X10 1494 aa22.41■■□□□ 1.18
CDKN1A-202ENST00000373711 SLIT2O94813 1529 aa22.4■■□□□ 1.18
CDKN1A-202ENST00000373711 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
CDKN1A-202ENST00000373711 FMN2Q9NZ56 1722 aa22.39■■□□□ 1.17
CDKN1A-202ENST00000373711 TECPR2O15040 1411 aa22.39■■□□□ 1.17
CDKN1A-202ENST00000373711 XPCQ01831 940 aaPredicted RBP22.38■■□□□ 1.17
CDKN1A-202ENST00000373711 LRP5O75197 1615 aa22.38■■□□□ 1.17
CDKN1A-202ENST00000373711 NWD2Q9ULI1 1742 aa22.37■■□□□ 1.17
CDKN1A-202ENST00000373711 RRBP1Q9P2E9 1410 aaKnown RBP22.35■■□□□ 1.17
CDKN1A-202ENST00000373711 HAP1P54257 671 aaPredicted RBP22.35■■□□□ 1.17
CDKN1A-202ENST00000373711 SPATA31A3Q5VYP0 1347 aa22.34■■□□□ 1.17
CDKN1A-202ENST00000373711 PLCH1Q4KWH8 1693 aa22.34■■□□□ 1.17
CDKN1A-202ENST00000373711 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
CDKN1A-202ENST00000373711 IFT172Q9UG01 1749 aa22.33■■□□□ 1.17
CDKN1A-202ENST00000373711 ANKRD30BQ9BXX2 1392 aa22.31■■□□□ 1.16
CDKN1A-202ENST00000373711 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
CDKN1A-202ENST00000373711 ABCC11Q96J66 1382 aa22.3■■□□□ 1.16
CDKN1A-202ENST00000373711 STK26Q9P289 416 aa22.3■■□□□ 1.16
CDKN1A-202ENST00000373711 TNS3Q68CZ2 1445 aa22.3■■□□□ 1.16
CDKN1A-202ENST00000373711 PSME1Q06323 249 aa22.29■■□□□ 1.16
CDKN1A-202ENST00000373711 VPS72Q15906 364 aa22.29■■□□□ 1.16
CDKN1A-202ENST00000373711 WAPLQ7Z5K2 1190 aa22.29■■□□□ 1.16
CDKN1A-202ENST00000373711 SEPT12Q8IYM1 358 aa22.29■■□□□ 1.16
CDKN1A-202ENST00000373711 ABCA3Q99758 1704 aa22.28■■□□□ 1.16
CDKN1A-202ENST00000373711 RGPD8O14715 1765 aaPredicted RBP22.28■■□□□ 1.16
CDKN1A-202ENST00000373711 KRT28Q7Z3Y7 464 aa22.28■■□□□ 1.16
CDKN1A-202ENST00000373711 DEFB132Q7Z7B7 95 aa22.28■■□□□ 1.16
CDKN1A-202ENST00000373711 CCDC9Q9Y3X0 531 aaKnown RBP22.27■■□□□ 1.16
CDKN1A-202ENST00000373711 ADGRF5Q8IZF2 1346 aa22.27■■□□□ 1.16
CDKN1A-202ENST00000373711 PPARGC1BQ86YN6 1023 aaKnown RBP22.26■■□□□ 1.15
CDKN1A-202ENST00000373711 ARHGEF10O15013 1369 aa22.25■■□□□ 1.15
CDKN1A-202ENST00000373711 KRT27Q7Z3Y8 459 aa22.25■■□□□ 1.15
CDKN1A-202ENST00000373711 BAG6P46379 1132 aa22.24■■□□□ 1.15
CDKN1A-202ENST00000373711 PIK3C2GO75747 1445 aa22.23■■□□□ 1.15
CDKN1A-202ENST00000373711 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
CDKN1A-202ENST00000373711 ONECUT3O60422 494 aaPredicted RBP22.23■■□□□ 1.15
CDKN1A-202ENST00000373711 SBNO1A3KN83 1393 aa22.23■■□□□ 1.15
CDKN1A-202ENST00000373711 PLEKHH1Q9ULM0 1364 aa22.23■■□□□ 1.15
CDKN1A-202ENST00000373711 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
CDKN1A-202ENST00000373711 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
CDKN1A-202ENST00000373711 A0A0G2JS52 829 aa22.21■■□□□ 1.15
CDKN1A-202ENST00000373711 MYT1Q01538 1121 aa22.21■■□□□ 1.15
CDKN1A-202ENST00000373711 SIRT1Q96EB6 747 aa22.21■■□□□ 1.15
CDKN1A-202ENST00000373711 SPATA31E1Q6ZUB1 1445 aa22.21■■□□□ 1.15
CDKN1A-202ENST00000373711 NRXN1Q9ULB1 1477 aa22.21■■□□□ 1.15
CDKN1A-202ENST00000373711 RGL3Q3MIN7 710 aa22.2■■□□□ 1.14
CDKN1A-202ENST00000373711 TMEM132EQ6IEE7 984 aa22.19■■□□□ 1.14
CDKN1A-202ENST00000373711 NRAPQ86VF7 1730 aa22.19■■□□□ 1.14
CDKN1A-202ENST00000373711 LMOD2Q6P5Q4 547 aa22.18■■□□□ 1.14
CDKN1A-202ENST00000373711 CABLES1Q8TDN4 633 aa22.16■■□□□ 1.14
CDKN1A-202ENST00000373711 COL14A1Q05707 1796 aaKnown RBP22.16■■□□□ 1.14
CDKN1A-202ENST00000373711 DHX57Q6P158 1386 aaKnown RBP22.15■■□□□ 1.14
CDKN1A-202ENST00000373711 ANKARQ7Z5J8 1434 aa22.14■■□□□ 1.14
CDKN1A-202ENST00000373711 PSDA5PKW4 1024 aaPredicted RBP22.13■■□□□ 1.13
CDKN1A-202ENST00000373711 PLEKHG5O94827 1062 aa22.13■■□□□ 1.13
CDKN1A-202ENST00000373711 HRCP23327 699 aa22.13■■□□□ 1.13
CDKN1A-202ENST00000373711 ADGRB2O60241 1585 aa22.12■■□□□ 1.13
CDKN1A-202ENST00000373711 TRPM3Q9HCF6 1732 aaPredicted RBP22.11■■□□□ 1.13
CDKN1A-202ENST00000373711 FAM83GA6ND36 823 aa22.1■■□□□ 1.13
CDKN1A-202ENST00000373711 FAM98CQ17RN3 349 aaKnown RBP22.1■■□□□ 1.13
CDKN1A-202ENST00000373711 C14orf93Q9H972 538 aaKnown RBP22.1■■□□□ 1.13
CDKN1A-202ENST00000373711 ALS2Q96Q42 1657 aa22.1■■□□□ 1.13
CDKN1A-202ENST00000373711 EIF3AQ14152 1382 aaKnown RBP22.1■■□□□ 1.13
CDKN1A-202ENST00000373711 DLC1Q96QB1 1528 aa22.09■■□□□ 1.13
CDKN1A-202ENST00000373711 TNS1Q9HBL0 1735 aaKnown RBP22.09■■□□□ 1.13
CDKN1A-202ENST00000373711 DISP2A7MBM2 1401 aa22.08■■□□□ 1.13
CDKN1A-202ENST00000373711 BTG4Q9NY30 223 aa22.08■■□□□ 1.13
CDKN1A-202ENST00000373711 GPRASP1Q5JY77 1395 aa22.08■■□□□ 1.12
CDKN1A-202ENST00000373711 PRAM1Q96QH2 718 aa22.07■■□□□ 1.12
CDKN1A-202ENST00000373711 MPHOSPH9Q99550 1183 aa22.06■■□□□ 1.12
CDKN1A-202ENST00000373711 POGKQ9P215 609 aa22.06■■□□□ 1.12
CDKN1A-202ENST00000373711 THSD7AQ9UPZ6 1657 aa22.06■■□□□ 1.12
CDKN1A-202ENST00000373711 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
CDKN1A-202ENST00000373711 EN1Q05925 392 aaPredicted RBP22.05■■□□□ 1.12
CDKN1A-202ENST00000373711 PMFBP1Q8TBY8 1022 aa22.05■■□□□ 1.12
CDKN1A-202ENST00000373711 SAFB2Q14151 953 aaKnown RBP eCLIP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms