RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 UHRF1BP1LA0JNW5 1464 aa20.28■□□□□ 0.84
PABPC4-201ENST00000372856 USP19O94966 1318 aa20.28■□□□□ 0.84
PABPC4-201ENST00000372856 DEPDC5O75140 1603 aa20.27■□□□□ 0.84
PABPC4-201ENST00000372856 ABCA6Q8N139 1617 aa20.27■□□□□ 0.84
PABPC4-201ENST00000372856 NSD3Q9BZ95 1437 aa20.27■□□□□ 0.84
PABPC4-201ENST00000372856 TCP11L2Q8N4U5 519 aa20.27■□□□□ 0.84
PABPC4-201ENST00000372856 FANCAO15360 1455 aa20.27■□□□□ 0.84
PABPC4-201ENST00000372856 RRP9O43818 475 aaKnown RBP20.27■□□□□ 0.83
PABPC4-201ENST00000372856 MAP3K4Q9Y6R4 1608 aa20.26■□□□□ 0.83
PABPC4-201ENST00000372856 TMEM132EQ6IEE7 984 aa20.25■□□□□ 0.83
PABPC4-201ENST00000372856 RUNDC1Q96C34 613 aa20.25■□□□□ 0.83
PABPC4-201ENST00000372856 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
PABPC4-201ENST00000372856 RARSP54136 660 aaKnown RBP20.25■□□□□ 0.83
PABPC4-201ENST00000372856 POGKQ9P215 609 aa20.25■□□□□ 0.83
PABPC4-201ENST00000372856 MYOM2P54296 1465 aa20.25■□□□□ 0.83
PABPC4-201ENST00000372856 VWDEQ8N2E2 1590 aa20.24■□□□□ 0.83
PABPC4-201ENST00000372856 KIAA1210Q9ULL0 1709 aa20.24■□□□□ 0.83
PABPC4-201ENST00000372856 NOS1P29475 1434 aa20.24■□□□□ 0.83
PABPC4-201ENST00000372856 RLBP1P12271 317 aa20.24■□□□□ 0.83
PABPC4-201ENST00000372856 MAPK8IP3Q9UPT6 1336 aa20.23■□□□□ 0.83
PABPC4-201ENST00000372856 MTHFSP49914 203 aa20.23■□□□□ 0.83
PABPC4-201ENST00000372856 PCDHB15Q9Y5E8 787 aa20.22■□□□□ 0.83
PABPC4-201ENST00000372856 ADGRL1O94910 1474 aa20.21■□□□□ 0.83
PABPC4-201ENST00000372856 NINLQ9Y2I6 1382 aa20.2■□□□□ 0.82
PABPC4-201ENST00000372856 ARAP3Q8WWN8 1544 aa20.2■□□□□ 0.82
PABPC4-201ENST00000372856 INO80Q9ULG1 1556 aaPredicted RBP20.2■□□□□ 0.82
PABPC4-201ENST00000372856 SBNO2Q9Y2G9 1366 aa20.19■□□□□ 0.82
PABPC4-201ENST00000372856 RBM10P98175 930 aaKnown RBP20.19■□□□□ 0.82
PABPC4-201ENST00000372856 SLKQ9H2G2 1235 aaPredicted RBP20.19■□□□□ 0.82
PABPC4-201ENST00000372856 MROH1Q8NDA8 1641 aa20.18■□□□□ 0.82
PABPC4-201ENST00000372856 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
PABPC4-201ENST00000372856 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
PABPC4-201ENST00000372856 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
PABPC4-201ENST00000372856 GGT6Q6P531 493 aa20.16■□□□□ 0.82
PABPC4-201ENST00000372856 WDR63Q8IWG1 891 aa20.16■□□□□ 0.82
PABPC4-201ENST00000372856 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
PABPC4-201ENST00000372856 C14orf93Q9H972 538 aaKnown RBP20.16■□□□□ 0.82
PABPC4-201ENST00000372856 NEURL4Q96JN8 1562 aa20.15■□□□□ 0.82
PABPC4-201ENST00000372856 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
PABPC4-201ENST00000372856 EFCAB6Q5THR3 1501 aa20.15■□□□□ 0.82
PABPC4-201ENST00000372856 MROH2AA6NES4 1674 aa20.15■□□□□ 0.82
PABPC4-201ENST00000372856 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
PABPC4-201ENST00000372856 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.825e-6■□□□□ 8
PABPC4-201ENST00000372856 BECN1Q14457 450 aa20.15■□□□□ 0.82
PABPC4-201ENST00000372856 KIF1BO60333 1816 aa20.14■□□□□ 0.81
PABPC4-201ENST00000372856 NRXN1Q9ULB1 1477 aa20.14■□□□□ 0.81
PABPC4-201ENST00000372856 SHPRHQ149N8 1683 aa20.12■□□□□ 0.81
PABPC4-201ENST00000372856 ABCA9Q8IUA7 1624 aa20.12■□□□□ 0.81
PABPC4-201ENST00000372856 IQSEC2Q5JU85 1478 aa20.12■□□□□ 0.81
PABPC4-201ENST00000372856 SAFB2Q14151 953 aaKnown RBP eCLIP20.11■□□□□ 0.81
PABPC4-201ENST00000372856 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
PABPC4-201ENST00000372856 UPF2Q9HAU5 1272 aaKnown RBP20.11■□□□□ 0.81
PABPC4-201ENST00000372856 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
PABPC4-201ENST00000372856 RWDD1Q9H446 243 aaPredicted RBP20.11■□□□□ 0.81
PABPC4-201ENST00000372856 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
PABPC4-201ENST00000372856 MYO3AQ8NEV4 1616 aa20.1■□□□□ 0.81
PABPC4-201ENST00000372856 ZNF518AQ6AHZ1 1483 aa20.09■□□□□ 0.81
PABPC4-201ENST00000372856 NLRP1Q9C000 1473 aa20.09■□□□□ 0.81
PABPC4-201ENST00000372856 CCDC27Q2M243 656 aa20.09■□□□□ 0.81
PABPC4-201ENST00000372856 CABP2Q9NPB3 220 aa20.09■□□□□ 0.81
PABPC4-201ENST00000372856 IFT172Q9UG01 1749 aa20.08■□□□□ 0.81
PABPC4-201ENST00000372856 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.8
PABPC4-201ENST00000372856 ADGRB3O60242 1522 aa20.08■□□□□ 0.8
PABPC4-201ENST00000372856 AAMPQ13685 434 aa20.08■□□□□ 0.8
PABPC4-201ENST00000372856 TBC1D32Q96NH3 1257 aa20.08■□□□□ 0.8
PABPC4-201ENST00000372856 NPATQ14207 1427 aa20.07■□□□□ 0.8
PABPC4-201ENST00000372856 MVPQ14764 893 aaKnown RBP20.07■□□□□ 0.8
PABPC4-201ENST00000372856 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
PABPC4-201ENST00000372856 L1TD1Q5T7N2 865 aaKnown RBP20.06■□□□□ 0.8
PABPC4-201ENST00000372856 SPRYD3Q8NCJ5 442 aa20.06■□□□□ 0.8
PABPC4-201ENST00000372856 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
PABPC4-201ENST00000372856 ZKSCAN2Q63HK3 967 aa20.06■□□□□ 0.8
PABPC4-201ENST00000372856 TBC1D2Q9BYX2 928 aa20.06■□□□□ 0.8
PABPC4-201ENST00000372856 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
PABPC4-201ENST00000372856 SETBP1Q9Y6X0 1596 aa20.06■□□□□ 0.8
PABPC4-201ENST00000372856 EVC2Q86UK5 1308 aa20.05■□□□□ 0.8
PABPC4-201ENST00000372856 DZIP1LQ8IYY4 767 aaKnown RBP20.05■□□□□ 0.8
PABPC4-201ENST00000372856 GZF1Q9H116 711 aaPredicted RBP20.05■□□□□ 0.8
PABPC4-201ENST00000372856 ADGRB1O14514 1584 aa20.05■□□□□ 0.8
PABPC4-201ENST00000372856 CLCN1P35523 988 aa20.04■□□□□ 0.8
PABPC4-201ENST00000372856 SMC4Q9NTJ3 1288 aa20.04■□□□□ 0.8
PABPC4-201ENST00000372856 VIRMAQ69YN4 1812 aaKnown RBP20.04■□□□□ 0.8
PABPC4-201ENST00000372856 ASXL2Q76L83 1435 aa20.04■□□□□ 0.8
PABPC4-201ENST00000372856 QRICH2Q9H0J4 1663 aa20.04■□□□□ 0.8
PABPC4-201ENST00000372856 EXOSC9Q06265 439 aaKnown RBP20.04■□□□□ 0.8
PABPC4-201ENST00000372856 ANTXR1Q9H6X2 564 aa20.04■□□□□ 0.8
PABPC4-201ENST00000372856 KIDINS220Q9ULH0 1771 aa20.03■□□□□ 0.8
PABPC4-201ENST00000372856 GGNBP2Q9H3C7 697 aa20.02■□□□□ 0.8
PABPC4-201ENST00000372856 STK26Q9P289 416 aa20.02■□□□□ 0.8
PABPC4-201ENST00000372856 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.8
PABPC4-201ENST00000372856 ANKRD36BQ8N2N9 1353 aa20.01■□□□□ 0.79
PABPC4-201ENST00000372856 XRCC6P12956 609 aaKnown RBP eCLIP20.01■□□□□ 0.791e-9■□□□□ 8
PABPC4-201ENST00000372856 TRIM27P14373 513 aa20■□□□□ 0.79
PABPC4-201ENST00000372856 ITPRIPQ8IWB1 547 aa20■□□□□ 0.79
PABPC4-201ENST00000372856 SSH1Q8WYL5 1049 aa20■□□□□ 0.79
PABPC4-201ENST00000372856 MFAP1P55081 439 aaKnown RBP20■□□□□ 0.79
PABPC4-201ENST00000372856 RPGRIP1LQ68CZ1 1315 aa20■□□□□ 0.79
PABPC4-201ENST00000372856 SRPK2P78362 688 aaKnown RBP19.99■□□□□ 0.79
PABPC4-201ENST00000372856 TMPOP42166 694 aaKnown RBP19.99■□□□□ 0.79
PABPC4-201ENST00000372856 VGFO15240 615 aaPredicted RBP19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms