RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 CCDC146Q8IYE0 955 aa16.84■□□□□ 0.29
TSC22D3-206ENST00000372397 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
TSC22D3-206ENST00000372397 ARHGEF40Q8TER5 1519 aa16.83■□□□□ 0.28
TSC22D3-206ENST00000372397 YTHDC2Q9H6S0 1430 aaKnown RBP16.83■□□□□ 0.28
TSC22D3-206ENST00000372397 ALKQ9UM73 1620 aa16.83■□□□□ 0.28
TSC22D3-206ENST00000372397 SPATA31D1Q6ZQQ2 1576 aa16.83■□□□□ 0.28
TSC22D3-206ENST00000372397 TNNT2P45379 298 aaPredicted RBP16.82■□□□□ 0.28
TSC22D3-206ENST00000372397 PTPRMP28827 1452 aa16.82■□□□□ 0.28
TSC22D3-206ENST00000372397 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
TSC22D3-206ENST00000372397 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
TSC22D3-206ENST00000372397 CGNL1Q0VF96 1302 aa16.81■□□□□ 0.28
TSC22D3-206ENST00000372397 ZNF521Q96K83 1311 aa16.81■□□□□ 0.28
TSC22D3-206ENST00000372397 POGKQ9P215 609 aa16.81■□□□□ 0.28
TSC22D3-206ENST00000372397 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
TSC22D3-206ENST00000372397 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
TSC22D3-206ENST00000372397 A2ML1A8K2U0 1454 aa16.81■□□□□ 0.28
TSC22D3-206ENST00000372397 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
TSC22D3-206ENST00000372397 MINK1Q8N4C8 1332 aaPredicted RBP16.8■□□□□ 0.28
TSC22D3-206ENST00000372397 APAF1O14727 1248 aa16.8■□□□□ 0.28
TSC22D3-206ENST00000372397 EXOC6Q8TAG9 804 aa16.8■□□□□ 0.28
TSC22D3-206ENST00000372397 GOLGA2Q08379 1002 aa16.79■□□□□ 0.28
TSC22D3-206ENST00000372397 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
TSC22D3-206ENST00000372397 ESF1Q9H501 851 aaKnown RBP16.78■□□□□ 0.28
TSC22D3-206ENST00000372397 RIMS2Q9UQ26 1411 aa16.78■□□□□ 0.28
TSC22D3-206ENST00000372397 ZMYM3Q14202 1370 aa16.77■□□□□ 0.27
TSC22D3-206ENST00000372397 PLIN1O60240 522 aa16.77■□□□□ 0.27
TSC22D3-206ENST00000372397 SHPRHQ149N8 1683 aa16.76■□□□□ 0.27
TSC22D3-206ENST00000372397 MTHFSP49914 203 aa16.75■□□□□ 0.27
TSC22D3-206ENST00000372397 SLFN5Q08AF3 891 aa16.75■□□□□ 0.27
TSC22D3-206ENST00000372397 NINLQ9Y2I6 1382 aa16.75■□□□□ 0.27
TSC22D3-206ENST00000372397 A0A1W2PP64 1363 aa16.74■□□□□ 0.27
TSC22D3-206ENST00000372397 NSD2O96028 1365 aa16.74■□□□□ 0.27
TSC22D3-206ENST00000372397 ATAD2Q6PL18 1390 aa16.74■□□□□ 0.27
TSC22D3-206ENST00000372397 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
TSC22D3-206ENST00000372397 CDK19Q9BWU1 502 aa16.73■□□□□ 0.27
TSC22D3-206ENST00000372397 NGEFQ8N5V2 710 aa16.72■□□□□ 0.27
TSC22D3-206ENST00000372397 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
TSC22D3-206ENST00000372397 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
TSC22D3-206ENST00000372397 TERF2IPQ9NYB0 399 aa16.72■□□□□ 0.27
TSC22D3-206ENST00000372397 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
TSC22D3-206ENST00000372397 ABCC11Q96J66 1382 aa16.72■□□□□ 0.27
TSC22D3-206ENST00000372397 WAPLQ7Z5K2 1190 aa16.71■□□□□ 0.27
TSC22D3-206ENST00000372397 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
TSC22D3-206ENST00000372397 DLC1Q96QB1 1528 aa16.69■□□□□ 0.26
TSC22D3-206ENST00000372397 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
TSC22D3-206ENST00000372397 CRBNQ96SW2 442 aa16.69■□□□□ 0.26
TSC22D3-206ENST00000372397 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
TSC22D3-206ENST00000372397 RUNDC1Q96C34 613 aa16.69■□□□□ 0.26
TSC22D3-206ENST00000372397 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
TSC22D3-206ENST00000372397 E9PSI1 815 aa16.68■□□□□ 0.26
TSC22D3-206ENST00000372397 CABP1Q9NZU7 370 aa16.68■□□□□ 0.26
TSC22D3-206ENST00000372397 NRXN3Q9Y4C0 1643 aa16.68■□□□□ 0.26
TSC22D3-206ENST00000372397 TNRQ92752 1358 aa16.67■□□□□ 0.26
TSC22D3-206ENST00000372397 FYB1O15117 783 aa16.67■□□□□ 0.26
TSC22D3-206ENST00000372397 C20orf194Q5TEA3 1177 aa16.67■□□□□ 0.26
TSC22D3-206ENST00000372397 HDGFL2Q7Z4V5 671 aaPredicted RBP16.67■□□□□ 0.26
TSC22D3-206ENST00000372397 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
TSC22D3-206ENST00000372397 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
TSC22D3-206ENST00000372397 NEUROD2Q15784 382 aa16.66■□□□□ 0.26
TSC22D3-206ENST00000372397 TCP11L2Q8N4U5 519 aa16.66■□□□□ 0.26
TSC22D3-206ENST00000372397 NKTRP30414 1462 aaKnown RBP16.66■□□□□ 0.26
TSC22D3-206ENST00000372397 METP08581 1390 aa16.66■□□□□ 0.26
TSC22D3-206ENST00000372397 RRP7AQ9Y3A4 280 aaKnown RBP16.65■□□□□ 0.26
TSC22D3-206ENST00000372397 HDGFP51858 240 aaKnown RBP16.65■□□□□ 0.26
TSC22D3-206ENST00000372397 ANKRD26Q9UPS8 1709 aa16.65■□□□□ 0.26
TSC22D3-206ENST00000372397 U2AF1L5P0DN76 240 aaPredicted RBP16.63■□□□□ 0.25
TSC22D3-206ENST00000372397 U2AF1Q01081 240 aaKnown RBP eCLIP16.63■□□□□ 0.25
TSC22D3-206ENST00000372397 TXNDC2Q86VQ3 553 aa16.63■□□□□ 0.25
TSC22D3-206ENST00000372397 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.63■□□□□ 0.25
TSC22D3-206ENST00000372397 MED14O60244 1454 aa16.63■□□□□ 0.25
TSC22D3-206ENST00000372397 IQSEC2Q5JU85 1478 aa16.63■□□□□ 0.25
TSC22D3-206ENST00000372397 NLRP1Q9C000 1473 aa16.63■□□□□ 0.25
TSC22D3-206ENST00000372397 UBR1Q8IWV7 1749 aa16.62■□□□□ 0.25
TSC22D3-206ENST00000372397 KIF20BQ96Q89 1820 aa16.61■□□□□ 0.25
TSC22D3-206ENST00000372397 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
TSC22D3-206ENST00000372397 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
TSC22D3-206ENST00000372397 BCL11AQ9H165 835 aa16.6■□□□□ 0.25
TSC22D3-206ENST00000372397 WASLO00401 505 aaPredicted RBP16.6■□□□□ 0.25
TSC22D3-206ENST00000372397 BCAR3O75815 825 aa16.6■□□□□ 0.25
TSC22D3-206ENST00000372397 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
TSC22D3-206ENST00000372397 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.25
TSC22D3-206ENST00000372397 WDR63Q8IWG1 891 aa16.58■□□□□ 0.25
TSC22D3-206ENST00000372397 ATP7BP35670 1465 aa16.58■□□□□ 0.25
TSC22D3-206ENST00000372397 CEBPAP49715 358 aaPredicted RBP16.58■□□□□ 0.24
TSC22D3-206ENST00000372397 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
TSC22D3-206ENST00000372397 COL3A1P02461 1466 aaPredicted RBP16.58■□□□□ 0.24
TSC22D3-206ENST00000372397 KNDC1Q76NI1 1749 aa16.57■□□□□ 0.24
TSC22D3-206ENST00000372397 SIRT1Q96EB6 747 aa16.57■□□□□ 0.24
TSC22D3-206ENST00000372397 FAM135BQ49AJ0 1406 aa16.56■□□□□ 0.24
TSC22D3-206ENST00000372397 MSH5O43196 834 aa16.56■□□□□ 0.24
TSC22D3-206ENST00000372397 TECPR2O15040 1411 aa16.56■□□□□ 0.24
TSC22D3-206ENST00000372397 PPIP5K1Q6PFW1 1433 aa16.56■□□□□ 0.24
TSC22D3-206ENST00000372397 NUDT16Q96DE0 195 aaKnown RBP16.55■□□□□ 0.24
TSC22D3-206ENST00000372397 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
TSC22D3-206ENST00000372397 PLEKHF1Q96S99 279 aa16.55■□□□□ 0.24
TSC22D3-206ENST00000372397 LTKP29376 864 aa16.54■□□□□ 0.24
TSC22D3-206ENST00000372397 CPS1P31327 1500 aa16.54■□□□□ 0.24
TSC22D3-206ENST00000372397 ADGRB2O60241 1585 aa16.54■□□□□ 0.24
TSC22D3-206ENST00000372397 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
TSC22D3-206ENST00000372397 NCKAP5LQ9HCH0 1330 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms